Click here to switch to the map view.

The map label for this gene is yybL

Identifier: 16081112

GI number: 16081112

Start: 4174410

End: 4175120

Strand: Direct

Name: yybL

Synonym: BSU40600

Alternate gene names: 16081112

Gene position: 4174410-4175120 (Clockwise)

Preceding gene: 16081111

Following gene: 16081113

Centisome position: 99.02

GC content: 26.02

Gene sequence:

>711_bases
ATGAAAATTAAAAGACTACTATTAATTTTATGTTTACTACTATTTTTAGTTACTTTATGGTTCAACCAGAACCACACTTA
TCTTGGAAAGAATTCTATCGCGTCATTACTATATATGAATAATAGTACATTCGGATATAGTTCAATATTTGCATATACCT
TGTTTTATATTGTCCCGTTTCTTATGTTACTTAGTAACTTTTTTCATTCAGAAAACCCCTACAAAGTAATGAGGATGGTT
AAGCGTAAAAATTACTACAAGTCTAAAATTATGGAGATTGGGTTTGTTTCTTTACTTTTTTCTTCAATACATACTGTTAT
TAATATTACGTGTACACATATTTTCTTTAGTAAAAACTTGTTGGTCGAAGCAAACTTTTTATCAATTTGTTTATTAAACA
TGATTAGTTTAGTGTTTTTCTACTTATCAGTAGGTATTATGTTTAGACTTACATACGATCTGTTTAATTCAGTAGCATTA
GCAATTTTTATTGTGTATATAATTTTAGATAGCTTGTATTTCGGCGTTAAATTATTACTTCCTAATGGATATTGGGAACC
CTTTAGAGACTTGGCTATATTCACAAATATGCTCAATAGATATTGGTCAACTTCAAATCTTATAATAGTTTATATTAGAC
AGATAATAATAGTTTTTATTTTTTATTTAGTTGGATCTTCAATTTTTTTGAATAAGGATTATAAAAAATGA

Upstream 100 bases:

>100_bases
ACAGAATACGGTTATAATGTACTTCTCCCTATCCTATGTTTGTCTATCTTTATTTTTCTAATAATAATTTCTAGTATTGT
TTTATATGAGGCAAAATACA

Downstream 100 bases:

>100_bases
GGATTAAAGGCTTTTTCATAACTTTAGTTGCGATAATATTTCAGGCGTCATTATCGAGTTATAATAATAATAAAAATGTC
TTTCCTTTTTTAGATGGCAT

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MKIKRLLLILCLLLFLVTLWFNQNHTYLGKNSIASLLYMNNSTFGYSSIFAYTLFYIVPFLMLLSNFFHSENPYKVMRMV
KRKNYYKSKIMEIGFVSLLFSSIHTVINITCTHIFFSKNLLVEANFLSICLLNMISLVFFYLSVGIMFRLTYDLFNSVAL
AIFIVYIILDSLYFGVKLLLPNGYWEPFRDLAIFTNMLNRYWSTSNLIIVYIRQIIIVFIFYLVGSSIFLNKDYKK

Sequences:

>Translated_236_residues
MKIKRLLLILCLLLFLVTLWFNQNHTYLGKNSIASLLYMNNSTFGYSSIFAYTLFYIVPFLMLLSNFFHSENPYKVMRMV
KRKNYYKSKIMEIGFVSLLFSSIHTVINITCTHIFFSKNLLVEANFLSICLLNMISLVFFYLSVGIMFRLTYDLFNSVAL
AIFIVYIILDSLYFGVKLLLPNGYWEPFRDLAIFTNMLNRYWSTSNLIIVYIRQIIIVFIFYLVGSSIFLNKDYKK
>Mature_236_residues
MKIKRLLLILCLLLFLVTLWFNQNHTYLGKNSIASLLYMNNSTFGYSSIFAYTLFYIVPFLMLLSNFFHSENPYKVMRMV
KRKNYYKSKIMEIGFVSLLFSSIHTVINITCTHIFFSKNLLVEANFLSICLLNMISLVFFYLSVGIMFRLTYDLFNSVAL
AIFIVYIILDSLYFGVKLLLPNGYWEPFRDLAIFTNMLNRYWSTSNLIIVYIRQIIIVFIFYLVGSSIFLNKDYKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YYBL_BACSU (P37492)

Other databases:

- EMBL:   M77837
- EMBL:   D26185
- EMBL:   AL009126
- PIR:   S65985
- RefSeq:   NP_391940.1
- ProteinModelPortal:   P37492
- EnsemblBacteria:   EBBACT00000000195
- GeneID:   936529
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU40600
- NMPDR:   fig|224308.1.peg.4066
- GenoList:   BSU40600
- OMA:   INITCTH
- ProtClustDB:   CLSK226563
- BioCyc:   BSUB:BSU40600-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27865; Mature: 27865

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKRLLLILCLLLFLVTLWFNQNHTYLGKNSIASLLYMNNSTFGYSSIFAYTLFYIVPF
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHH
LMLLSNFFHSENPYKVMRMVKRKNYYKSKIMEIGFVSLLFSSIHTVINITCTHIFFSKNL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LVEANFLSICLLNMISLVFFYLSVGIMFRLTYDLFNSVALAIFIVYIILDSLYFGVKLLL
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PNGYWEPFRDLAIFTNMLNRYWSTSNLIIVYIRQIIIVFIFYLVGSSIFLNKDYKK
CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCC
>Mature Secondary Structure
MKIKRLLLILCLLLFLVTLWFNQNHTYLGKNSIASLLYMNNSTFGYSSIFAYTLFYIVPF
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHH
LMLLSNFFHSENPYKVMRMVKRKNYYKSKIMEIGFVSLLFSSIHTVINITCTHIFFSKNL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LVEANFLSICLLNMISLVFFYLSVGIMFRLTYDLFNSVALAIFIVYIILDSLYFGVKLLL
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PNGYWEPFRDLAIFTNMLNRYWSTSNLIIVYIRQIIIVFIFYLVGSSIFLNKDYKK
CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1938973; 7584024; 9384377