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The map label for this gene is yxkA

Identifier: 16080938

GI number: 16080938

Start: 3991082

End: 3991588

Strand: Reverse

Name: yxkA

Synonym: BSU38870

Alternate gene names: 16080938

Gene position: 3991588-3991082 (Counterclockwise)

Preceding gene: 255767821

Following gene: 16080937

Centisome position: 94.69

GC content: 44.77

Gene sequence:

>507_bases
ATGAACATATACGTAGAAGCAAATCCATATTTACATGACAAGTATTCAAAATACGCGGATGAAAAATATAAGAGAGAAGG
AAACCCATTTGTATCCTTTCCAATTCATTTTGATGACATCCCGTCCGGAGCAAAGACGCTCGCACTTACTTTCATCGATC
ATGACGCCATTCCCGTATGCGGATTCAGCTGGATTCACTGGACAGCGGCTAATATTCCGGCTTACATCGGAGAGCTTCCT
GAACATGCGAGTGAGGAAAGACAGGACTTGATGATACAAGGGCAAAACAGCTTTGCTTCACCGCTTGCGGGAAGCAACGA
TCCAAAGGTGATTCACCAGTATTGCGGGCCGACACCGCCTGACAAGGATCATGCGTATACATTGACGGTCTATGCTTTAG
ATGCTGAGCTGAATCTTCAGCCGGGCTTTTACTTGAATGAGCTCTATCAAGAAATGAAAGAGCACATTCTTGCTGAAACC
TCTATCGAATTGCTGGCAAGGGTTTAA

Upstream 100 bases:

>100_bases
TAACAAATTGTTACGTTTACATGCGTATTTGTTTATCACTGATTATACATCGATTCGTTTAGTATACCTATAGAACGAGA
AAATAGAGAGAGGGATTCAT

Downstream 100 bases:

>100_bases
GCTAAAAAATATGAAAAAACTATTAATAAACGATTAAACTTCTTAAAAATGGATGTGGACCGGTTCTAAACACTATATAA
TGAAAACAGGTCATTTTTTA

Product: bacteriophage protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MNIYVEANPYLHDKYSKYADEKYKREGNPFVSFPIHFDDIPSGAKTLALTFIDHDAIPVCGFSWIHWTAANIPAYIGELP
EHASEERQDLMIQGQNSFASPLAGSNDPKVIHQYCGPTPPDKDHAYTLTVYALDAELNLQPGFYLNELYQEMKEHILAET
SIELLARV

Sequences:

>Translated_168_residues
MNIYVEANPYLHDKYSKYADEKYKREGNPFVSFPIHFDDIPSGAKTLALTFIDHDAIPVCGFSWIHWTAANIPAYIGELP
EHASEERQDLMIQGQNSFASPLAGSNDPKVIHQYCGPTPPDKDHAYTLTVYALDAELNLQPGFYLNELYQEMKEHILAET
SIELLARV
>Mature_168_residues
MNIYVEANPYLHDKYSKYADEKYKREGNPFVSFPIHFDDIPSGAKTLALTFIDHDAIPVCGFSWIHWTAANIPAYIGELP
EHASEERQDLMIQGQNSFASPLAGSNDPKVIHQYCGPTPPDKDHAYTLTVYALDAELNLQPGFYLNELYQEMKEHILAET
SIELLARV

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YXKA_BACSU (P55185)

Other databases:

- EMBL:   X99339
- EMBL:   D83026
- EMBL:   AL009126
- PIR:   E70080
- RefSeq:   NP_391766.1
- ProteinModelPortal:   P55185
- SMR:   P55185
- EnsemblBacteria:   EBBACT00000000995
- GeneID:   937438
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU38870
- NMPDR:   fig|224308.1.peg.3892
- GenoList:   BSU38870
- HOGENOM:   HBG649023
- OMA:   EVMIQTD
- BioCyc:   BSUB:BSU38870-MONOMER
- InterPro:   IPR008914
- InterPro:   IPR005247
- Gene3D:   G3DSA:3.90.280.10
- TIGRFAMs:   TIGR00481

Pfam domain/function: PF01161 PBP; SSF49777 PEBP

EC number: NA

Molecular weight: Translated: 19030; Mature: 19030

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIYVEANPYLHDKYSKYADEKYKREGNPFVSFPIHFDDIPSGAKTLALTFIDHDAIPVC
CEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCC
GFSWIHWTAANIPAYIGELPEHASEERQDLMIQGQNSFASPLAGSNDPKVIHQYCGPTPP
CCHHHEEEHHCCCHHHHHCCHHHHHHHHCEEEECCCCCCCCCCCCCCHHHHHHHCCCCCC
DKDHAYTLTVYALDAELNLQPGFYLNELYQEMKEHILAETSIELLARV
CCCCEEEEEEEEEECEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNIYVEANPYLHDKYSKYADEKYKREGNPFVSFPIHFDDIPSGAKTLALTFIDHDAIPVC
CEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCC
GFSWIHWTAANIPAYIGELPEHASEERQDLMIQGQNSFASPLAGSNDPKVIHQYCGPTPP
CCHHHEEEHHCCCHHHHHCCHHHHHHHHCEEEECCCCCCCCCCCCCCHHHHHHHCCCCCC
DKDHAYTLTVYALDAELNLQPGFYLNELYQEMKEHILAETSIELLARV
CCCCEEEEEEEEEECEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8978088; 8969509; 9384377