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The map label for this gene is yxlE

Identifier: 16080918

GI number: 16080918

Start: 3969611

End: 3969799

Strand: Reverse

Name: yxlE

Synonym: BSU38670

Alternate gene names: 16080918

Gene position: 3969799-3969611 (Counterclockwise)

Preceding gene: 16080919

Following gene: 16080917

Centisome position: 94.17

GC content: 43.39

Gene sequence:

>189_bases
ATGAATATTTCTTGGGAAATGATTTTGCCGCTGATTGTATTACAGCTGGCTTTGGCGGTGTTTGCCCTTATCAGCTGTAT
AAAAGAAGAGCGGACGAACGGGCCAAAGTGGATGTGGGCTGCAATCATCGTATGTATCAATATTATCGGGCCGATTTTAT
TTTTCACCGTCGGCAGAAAGCAAAGGTAA

Upstream 100 bases:

>100_bases
GGGTTTGGGGGATTGTCGGATTGATTCAAGCACCGATGCCTCTGATTTGTTATTACTTTTTTGTCATTAGGCCGGATCGG
AAGAAAAGGGGGATCAAGCA

Downstream 100 bases:

>100_bases
GCCGATATGCTGTCTATTGAATCATTATGCAAATCGTACAGGCACCATGAAGCTGTAAAGAATGTCAGTTTTCACGTGAA
TGAAAATGAGTGTGTCGCAC

Product: negative regulator of sigma-Y activity

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 62; Mature: 62

Protein sequence:

>62_residues
MNISWEMILPLIVLQLALAVFALISCIKEERTNGPKWMWAAIIVCINIIGPILFFTVGRKQR

Sequences:

>Translated_62_residues
MNISWEMILPLIVLQLALAVFALISCIKEERTNGPKWMWAAIIVCINIIGPILFFTVGRKQR
>Mature_62_residues
MNISWEMILPLIVLQLALAVFALISCIKEERTNGPKWMWAAIIVCINIIGPILFFTVGRKQR

Specific function: Together with yxlD is important for negative regulation of sigma Y activity

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YXLE_BACSU (P94373)

Other databases:

- EMBL:   D83026
- EMBL:   AL009126
- PIR:   H70081
- RefSeq:   NP_391746.1
- EnsemblBacteria:   EBBACT00000001810
- GeneID:   937395
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU38670
- NMPDR:   fig|224308.1.peg.3872
- GenoList:   BSU38670
- GeneTree:   EBGT00050000006085
- HOGENOM:   HBG728127
- OMA:   NGPKWMW
- ProtClustDB:   CLSK537160
- BioCyc:   BSUB:BSU38670-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7085; Mature: 7085

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x133c8544)-; HASH(0x12fbe47c)-;

Cys/Met content:

3.2 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNISWEMILPLIVLQLALAVFALISCIKEERTNGPKWMWAAIIVCINIIGPILFFTVGRK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
QR
CH
>Mature Secondary Structure
MNISWEMILPLIVLQLALAVFALISCIKEERTNGPKWMWAAIIVCINIIGPILFFTVGRK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
QR
CH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377