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The map label for this gene is yxlD

Identifier: 16080919

GI number: 16080919

Start: 3969796

End: 3970002

Strand: Reverse

Name: yxlD

Synonym: BSU38680

Alternate gene names: 16080919

Gene position: 3970002-3969796 (Counterclockwise)

Preceding gene: 16080920

Following gene: 16080918

Centisome position: 94.17

GC content: 41.55

Gene sequence:

>207_bases
ATGACACAAACAGAAATTATCATAACGGTTGCGGCTTGTCTCATCGTATTGGCGCAGGGAATCTTTTTATTTATTGATGC
GAAAAAACGTAATCACATGGCATGGGTTTGGGGGATTGTCGGATTGATTCAAGCACCGATGCCTCTGATTTGTTATTACT
TTTTTGTCATTAGGCCGGATCGGAAGAAAAGGGGGATCAAGCAATGA

Upstream 100 bases:

>100_bases
CTGTGTTTATTGTGCTTCAGGTTTGTGTGCTTGCGGTGCTGCCGATTTTGATTGCGGCTGAGAAAAAAAGGCATCTCGGC
GAATGCGAGGTGAAACGCGG

Downstream 100 bases:

>100_bases
ATATTTCTTGGGAAATGATTTTGCCGCTGATTGTATTACAGCTGGCTTTGGCGGTGTTTGCCCTTATCAGCTGTATAAAA
GAAGAGCGGACGAACGGGCC

Product: sigma-Y antisigma factor component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 68; Mature: 67

Protein sequence:

>68_residues
MTQTEIIITVAACLIVLAQGIFLFIDAKKRNHMAWVWGIVGLIQAPMPLICYYFFVIRPDRKKRGIKQ

Sequences:

>Translated_68_residues
MTQTEIIITVAACLIVLAQGIFLFIDAKKRNHMAWVWGIVGLIQAPMPLICYYFFVIRPDRKKRGIKQ
>Mature_67_residues
TQTEIIITVAACLIVLAQGIFLFIDAKKRNHMAWVWGIVGLIQAPMPLICYYFFVIRPDRKKRGIKQ

Specific function: Together with yxlE, is important for negative regulation of sigma Y activity, being the major negative regulator

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YXLD_BACSU (P94372)

Other databases:

- EMBL:   D83026
- EMBL:   AL009126
- PIR:   G70081
- RefSeq:   NP_391747.1
- EnsemblBacteria:   EBBACT00000001805
- GeneID:   937398
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU38680
- NMPDR:   fig|224308.1.peg.3873
- GenoList:   BSU38680
- GeneTree:   EBGT00050000006614
- HOGENOM:   HBG345348
- OMA:   MSETEMI
- ProtClustDB:   CLSK2752560
- BioCyc:   BSUB:BSU38680-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7850; Mature: 7719

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x133e7e8c)-; HASH(0x137ea674)-;

Cys/Met content:

2.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQTEIIITVAACLIVLAQGIFLFIDAKKRNHMAWVWGIVGLIQAPMPLICYYFFVIRPD
CCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCC
RKKRGIKQ
HHCCCCCH
>Mature Secondary Structure 
TQTEIIITVAACLIVLAQGIFLFIDAKKRNHMAWVWGIVGLIQAPMPLICYYFFVIRPD
CCHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCC
RKKRGIKQ
HHCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377