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The map label for this gene is ywbB

Identifier: 16080889

GI number: 16080889

Start: 3937553

End: 3938230

Strand: Reverse

Name: ywbB

Synonym: BSU38380

Alternate gene names: 16080889

Gene position: 3938230-3937553 (Counterclockwise)

Preceding gene: 16080890

Following gene: 16080887

Centisome position: 93.42

GC content: 39.68

Gene sequence:

>678_bases
ATGCTAGATTATATATGGTTAGATGACGAATCACCAATCTTACAACAAGTACCAGTTGAATACTCATCTGCTGCTCTTAT
CTTTTCTCCTTTTATCCAAATGCCTGAAGGATGGGAGAATGCAAAAAGAAAAAATGATTATGAACATATTTATCCAAACG
ATAATGAAATAAGAGGAATAGGCAAGGCTGTTTCCTGGAAGAAGGTTATGTCTTCTTGCGGCTTTCAAACACATGCTGAG
CTGGCGCTGGCTTTAATGACGTCGATAGGCGCTTTAAGGGACGAGTTCGCGAGAGAGGATTTGGCTGAGGTGTTACATGA
AAACATAAATGGAGACCTCTATTATCCCAGTGAGGATCATATTTCAAATTTTCATATTCCGAGTTTGGTAAAGGTATTAG
GTGCGAACGGATCCAATCGGTTTTATTACGCAGAACCGATTGTGGAAAACCGCGGCGTTTTGGACATAACTGAAGCCAAC
TTGCGGACGGTTCTTGATGAAGCCGCAACAGAGCTCGTTTTAACTGATGAGAAAATGGATTTTGTGTTTATGAGTGTATA
TGACTCATTCATTAATGTCTTTTTAGCCAAAGATAAAAACATCCATGAATTGGTTGAGCGTATGGGCTGGGAAGCTATGA
TTTGCGATGAGTCAACGTATATCAGTTGGTATAGATAA

Upstream 100 bases:

>100_bases
TCTGGGGATAAAAATGTGATGTGATAGATGATCAGCCTGTCATAGGGCTGATCATCTCTTTCAAACGAAAGGAATGTTAG
AATATGTAAAGGAGGTGCGC

Downstream 100 bases:

>100_bases
AAAAGAACGTACATCACAAAATGTACGTTCTTTATTTTTACCGCTGAAAGAACTCAATCCACTCACCGTCAGGGCCTTCG
ATATAGAAATAACGGTATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MLDYIWLDDESPILQQVPVEYSSAALIFSPFIQMPEGWENAKRKNDYEHIYPNDNEIRGIGKAVSWKKVMSSCGFQTHAE
LALALMTSIGALRDEFAREDLAEVLHENINGDLYYPSEDHISNFHIPSLVKVLGANGSNRFYYAEPIVENRGVLDITEAN
LRTVLDEAATELVLTDEKMDFVFMSVYDSFINVFLAKDKNIHELVERMGWEAMICDESTYISWYR

Sequences:

>Translated_225_residues
MLDYIWLDDESPILQQVPVEYSSAALIFSPFIQMPEGWENAKRKNDYEHIYPNDNEIRGIGKAVSWKKVMSSCGFQTHAE
LALALMTSIGALRDEFAREDLAEVLHENINGDLYYPSEDHISNFHIPSLVKVLGANGSNRFYYAEPIVENRGVLDITEAN
LRTVLDEAATELVLTDEKMDFVFMSVYDSFINVFLAKDKNIHELVERMGWEAMICDESTYISWYR
>Mature_225_residues
MLDYIWLDDESPILQQVPVEYSSAALIFSPFIQMPEGWENAKRKNDYEHIYPNDNEIRGIGKAVSWKKVMSSCGFQTHAE
LALALMTSIGALRDEFAREDLAEVLHENINGDLYYPSEDHISNFHIPSLVKVLGANGSNRFYYAEPIVENRGVLDITEAN
LRTVLDEAATELVLTDEKMDFVFMSVYDSFINVFLAKDKNIHELVERMGWEAMICDESTYISWYR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YWBB_BACSU (P39585)

Other databases:

- EMBL:   X73124
- EMBL:   AL009126
- PIR:   S39672
- RefSeq:   NP_391717.1
- ProteinModelPortal:   P39585
- EnsemblBacteria:   EBBACT00000001072
- GeneID:   937330
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU38380
- NMPDR:   fig|224308.1.peg.3843
- GenoList:   BSU38380
- GeneTree:   EBGT00050000002563
- HOGENOM:   HBG338214
- OMA:   RKRPYEH
- ProtClustDB:   CLSK888107
- BioCyc:   BSUB:BSU38380-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25862; Mature: 25862

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDYIWLDDESPILQQVPVEYSSAALIFSPFIQMPEGWENAKRKNDYEHIYPNDNEIRGI
CCCEEEECCCCCHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCHHHH
GKAVSWKKVMSSCGFQTHAELALALMTSIGALRDEFAREDLAEVLHENINGDLYYPSEDH
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHC
ISNFHIPSLVKVLGANGSNRFYYAEPIVENRGVLDITEANLRTVLDEAATELVLTDEKMD
CCCCCHHHHHHHHCCCCCCCEEEECCCCCCCCEEEECHHHHHHHHHHHHHHEEEECCCHH
FVFMSVYDSFINVFLAKDKNIHELVERMGWEAMICDESTYISWYR
HHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEECCCCEEEEEC
>Mature Secondary Structure
MLDYIWLDDESPILQQVPVEYSSAALIFSPFIQMPEGWENAKRKNDYEHIYPNDNEIRGI
CCCEEEECCCCCHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCHHHH
GKAVSWKKVMSSCGFQTHAELALALMTSIGALRDEFAREDLAEVLHENINGDLYYPSEDH
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHC
ISNFHIPSLVKVLGANGSNRFYYAEPIVENRGVLDITEANLRTVLDEAATELVLTDEKMD
CCCCCHHHHHHHHCCCCCCCEEEECCCCCCCCEEEECHHHHHHHHHHHHHHEEEECCCHH
FVFMSVYDSFINVFLAKDKNIHELVERMGWEAMICDESTYISWYR
HHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377