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The map label for this gene is efeN

Identifier: 16080877

GI number: 16080877

Start: 3926682

End: 3927932

Strand: Reverse

Name: efeN

Synonym: BSU38260

Alternate gene names: 16080877

Gene position: 3927932-3926682 (Counterclockwise)

Preceding gene: 16080878

Following gene: 16080876

Centisome position: 93.18

GC content: 48.6

Gene sequence:

>1251_bases
ATGAGCGATGAACAGAAAAAGCCAGAACAAATTCACAGACGGGACATTTTAAAATGGGGAGCGATGGCGGGGGCAGCCGT
TGCGATCGGTGCCAGCGGTCTCGGCGGTCTCGCTCCGCTTGTTCAGACTGCGGCTAAGCCATCGAAAAAGGATGAAAAAG
AGGAGGAGCAGATTGTTCCGTTTTACGGAAAGCATCAGGCCGGAATCACAACTGCCCATCAGACGTATGTCTATTTTGCT
GCACTGGATGTAACAGCAAAAGACAAAAGCGACATCATTACGTTATTTAGAAACTGGACAAGTCTCACACAGATGCTGAC
GTCTGGCAAGAAAATGTCAGCGGAGCAGAGAAATCAGTATCTGCCGCCGCAGGATACAGGTGAGTCTGCTGATTTATCCC
CTTCCAACTTAACGGTCACATTCGGATTCGGGCCTGGCTTTTTTGAAAAAGACGGAAAGGACCGCTTCGGACTGAAAAGC
AAAAAACCGAAGCACCTAGCCGCTCTTCCAGCGATGCCCAATGACAACCTGGATGAAAAGCAGGGAGGCGGGGACATCTG
CATTCAAGTGTGTGCAGACGACGAGCAAGTGGCGTTTCACGCGCTGCGTAACCTGCTAAATCAAGCGGTCGGCACTTGTG
AGGTCCGTTTTGTGAACAAAGGCTTTTTAAGCGGTGGAAAAAATGGTGAAACACCGCGCAACCTCTTCGGGTTTAAAGAT
GGAACAGGCAACCAGAGCACGAAGGATGACACGTTGATGAACTCGATCGTGTGGATTCAGTCTGGTGAGCCTGACTGGAT
GACGGGCGGCACCTATATGGCTTTTCGGAAAATCAAAATGTTCCTTGAGGTATGGGACCGCTCTTCCCTCAAGGACCAAG
AGGATACCTTCGGCCGCAGAAAAAGCTCGGGGGCGCCTTTTGGGCAGAAAAAGGAAACAGATCCCGTGAAGCTGAATCAA
ATTCCGTCTAATTCACACGTCAGTCTAGCGAAATCTACTGGGAAACAAATTTTGCGAAGAGCTTTCTCTTACACAGAAGG
ACTTGATCCGAAAACCGGCTATATGGATGCAGGTCTCCTGTTTATCAGTTTTCAAAAAAATCCCGACAATCAGTTTATCC
CGATGCTGAAGGCTCTTTCAGCAAAGGATGCGTTAAACGAATATACACAAACAATCGGTTCTGCTTTATACGCATGCCCA
GGCGGCTGCAAAAAAGGAGAATATATTGCCCAGCGTTTGCTGGAATCATAA

Upstream 100 bases:

>100_bases
AAGTGAAAAGCAAATCAGAGAGCTGAGCACTAAGCTGACGACTCTTTCTGAAACCATGTCGAAGATTGCGAATGTGCTAT
AAAAGGAGTTTTGTAACATC

Downstream 100 bases:

>100_bases
AAGAAGCCTTTACAGGCTTCTTTCAGCGTGTCGACAAACCCTCGCATTCGTTGTCAAGCCTGTGCGTTGGTGCTCACGAA
TTAGAGCATTCGCTCCGCTC

Product: iron-dependent peroxidase convert ferric iron into ferrous iron

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 415

Protein sequence:

>416_residues
MSDEQKKPEQIHRRDILKWGAMAGAAVAIGASGLGGLAPLVQTAAKPSKKDEKEEEQIVPFYGKHQAGITTAHQTYVYFA
ALDVTAKDKSDIITLFRNWTSLTQMLTSGKKMSAEQRNQYLPPQDTGESADLSPSNLTVTFGFGPGFFEKDGKDRFGLKS
KKPKHLAALPAMPNDNLDEKQGGGDICIQVCADDEQVAFHALRNLLNQAVGTCEVRFVNKGFLSGGKNGETPRNLFGFKD
GTGNQSTKDDTLMNSIVWIQSGEPDWMTGGTYMAFRKIKMFLEVWDRSSLKDQEDTFGRRKSSGAPFGQKKETDPVKLNQ
IPSNSHVSLAKSTGKQILRRAFSYTEGLDPKTGYMDAGLLFISFQKNPDNQFIPMLKALSAKDALNEYTQTIGSALYACP
GGCKKGEYIAQRLLES

Sequences:

>Translated_416_residues
MSDEQKKPEQIHRRDILKWGAMAGAAVAIGASGLGGLAPLVQTAAKPSKKDEKEEEQIVPFYGKHQAGITTAHQTYVYFA
ALDVTAKDKSDIITLFRNWTSLTQMLTSGKKMSAEQRNQYLPPQDTGESADLSPSNLTVTFGFGPGFFEKDGKDRFGLKS
KKPKHLAALPAMPNDNLDEKQGGGDICIQVCADDEQVAFHALRNLLNQAVGTCEVRFVNKGFLSGGKNGETPRNLFGFKD
GTGNQSTKDDTLMNSIVWIQSGEPDWMTGGTYMAFRKIKMFLEVWDRSSLKDQEDTFGRRKSSGAPFGQKKETDPVKLNQ
IPSNSHVSLAKSTGKQILRRAFSYTEGLDPKTGYMDAGLLFISFQKNPDNQFIPMLKALSAKDALNEYTQTIGSALYACP
GGCKKGEYIAQRLLES
>Mature_415_residues
SDEQKKPEQIHRRDILKWGAMAGAAVAIGASGLGGLAPLVQTAAKPSKKDEKEEEQIVPFYGKHQAGITTAHQTYVYFAA
LDVTAKDKSDIITLFRNWTSLTQMLTSGKKMSAEQRNQYLPPQDTGESADLSPSNLTVTFGFGPGFFEKDGKDRFGLKSK
KPKHLAALPAMPNDNLDEKQGGGDICIQVCADDEQVAFHALRNLLNQAVGTCEVRFVNKGFLSGGKNGETPRNLFGFKDG
TGNQSTKDDTLMNSIVWIQSGEPDWMTGGTYMAFRKIKMFLEVWDRSSLKDQEDTFGRRKSSGAPFGQKKETDPVKLNQI
PSNSHVSLAKSTGKQILRRAFSYTEGLDPKTGYMDAGLLFISFQKNPDNQFIPMLKALSAKDALNEYTQTIGSALYACPG
GCKKGEYIAQRLLES

Specific function: Unknown

COG id: COG2837

COG function: function code P; Predicted iron-dependent peroxidase

Gene ontology:

Cell location: Secreted

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DyP-type peroxidase family

Homologues:

Organism=Escherichia coli, GI1787255, Length=427, Percent_Identity=37.0023419203747, Blast_Score=253, Evalue=1e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YWBN_BACSU (P39597)

Other databases:

- EMBL:   X73124
- EMBL:   AL009126
- PIR:   S39684
- RefSeq:   NP_391705.1
- ProteinModelPortal:   P39597
- PeroxiBase:   5874
- EnsemblBacteria:   EBBACT00000003556
- GeneID:   937310
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU38260
- NMPDR:   fig|224308.1.peg.3831
- GenoList:   BSU38260
- GeneTree:   EBGT00050000002729
- HOGENOM:   HBG296848
- OMA:   CADDPQV
- PhylomeDB:   P39597
- ProtClustDB:   CLSK888103
- BioCyc:   BSUB:BSU38260-MONOMER
- InterPro:   IPR011008
- InterPro:   IPR006314
- InterPro:   IPR006313
- InterPro:   IPR006311
- InterPro:   IPR019546
- TIGRFAMs:   TIGR01413
- TIGRFAMs:   TIGR01409
- TIGRFAMs:   TIGR01412

Pfam domain/function: PF04261 Dyp_perox; PF10518 TAT_signal; SSF54909 Dimer_A_B_barrel

EC number: NA

Molecular weight: Translated: 45693; Mature: 45562

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: PS51404 DYP_PEROXIDASE; PS51318 TAT

Important sites: ACT_SITE 240-240

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDEQKKPEQIHRRDILKWGAMAGAAVAIGASGLGGLAPLVQTAAKPSKKDEKEEEQIVP
CCCCCCCHHHHHHHHHHHHHHHHCHHHEECCCCCCHHHHHHHHHCCCCCCCCCHHHCCCC
FYGKHQAGITTAHQTYVYFAALDVTAKDKSDIITLFRNWTSLTQMLTSGKKMSAEQRNQY
CCCCCCCCCEEHHHEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCC
LPPQDTGESADLSPSNLTVTFGFGPGFFEKDGKDRFGLKSKKPKHLAALPAMPNDNLDEK
CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHEECCCCCCCCCCCC
QGGGDICIQVCADDEQVAFHALRNLLNQAVGTCEVRFVNKGFLSGGKNGETPRNLFGFKD
CCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECCHHCCCCCCCCCCHHHCCCCC
GTGNQSTKDDTLMNSIVWIQSGEPDWMTGGTYMAFRKIKMFLEVWDRSSLKDQEDTFGRR
CCCCCCCCHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCC
KSSGAPFGQKKETDPVKLNQIPSNSHVSLAKSTGKQILRRAFSYTEGLDPKTGYMDAGLL
CCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEE
FISFQKNPDNQFIPMLKALSAKDALNEYTQTIGSALYACPGGCKKGEYIAQRLLES
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
SDEQKKPEQIHRRDILKWGAMAGAAVAIGASGLGGLAPLVQTAAKPSKKDEKEEEQIVP
CCCCCCHHHHHHHHHHHHHHHHCHHHEECCCCCCHHHHHHHHHCCCCCCCCCHHHCCCC
FYGKHQAGITTAHQTYVYFAALDVTAKDKSDIITLFRNWTSLTQMLTSGKKMSAEQRNQY
CCCCCCCCCEEHHHEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCC
LPPQDTGESADLSPSNLTVTFGFGPGFFEKDGKDRFGLKSKKPKHLAALPAMPNDNLDEK
CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHEECCCCCCCCCCCC
QGGGDICIQVCADDEQVAFHALRNLLNQAVGTCEVRFVNKGFLSGGKNGETPRNLFGFKD
CCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECCHHCCCCCCCCCCHHHCCCCC
GTGNQSTKDDTLMNSIVWIQSGEPDWMTGGTYMAFRKIKMFLEVWDRSSLKDQEDTFGRR
CCCCCCCCHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCC
KSSGAPFGQKKETDPVKLNQIPSNSHVSLAKSTGKQILRRAFSYTEGLDPKTGYMDAGLL
CCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEE
FISFQKNPDNQFIPMLKALSAKDALNEYTQTIGSALYACPGGCKKGEYIAQRLLES
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377