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The map label for this gene is efeM

Identifier: 16080878

GI number: 16080878

Start: 3927951

End: 3929108

Strand: Reverse

Name: efeM

Synonym: BSU38270

Alternate gene names: 16080878

Gene position: 3929108-3927951 (Counterclockwise)

Preceding gene: 255767813

Following gene: 16080877

Centisome position: 93.2

GC content: 43.18

Gene sequence:

>1158_bases
ATGAATTTCACAAAAATCGCTGTATCAGCCGGATGCATCCTTGCGCTGTGCGCAGGCTGCGGAGCCAATGACACATCTTC
AACCAAAGAAAAAGCTTCATCTGAAAAAAGCGGGGTCACTAAAGAAATCACCGCATCCGTAAATAAAATGGAAACCATCA
TTTCTAAGCTGAATGACTCAGTGGAAAAAGGAGACCAAAAAGAGATTGAAAAGAAGGGGAAAGAGTTAAACAGCTACTGG
CTTTCCTTTGAAAACGATATTCGCAGCGACTATCCATTCGAATATACAGAAATCGAAAAGCATCTTCAGCCAATCTACAC
AGAAGCGCAAAAAGACAAACCGGATGCAGGAAAAATCAAGACAGAATCCGAGTCATTGAAAGCATCCTTAGAAGACCTGA
CAGAAGCGAAGAAGAGCGGCAAAAAGGCTAGCGATCAGCTGGCAAAAGCAGCGGATGAGTATAAAGGCTATGTCAAAGAG
CAGAGTGACCAGCTTGTCAAAGCGACTGAAGCATTTACGGGTGCTGTGAAATCCGGCGATATCGAAAAGTCCAAAACGTT
ATATGCGAAAGCGCGTGTTTATTACGAGCGAATCGAACCGATCGCTGAAAGCCTCGGAGATCTTGATCCGAAAATTGACG
CACGAGAAAACGATGTTGAAGAAGGAGACAAATGGACAGGCTTCCATAAGCTTGAGAAGGCCATTTGGAAGGATCAAGAT
ATTTCCGGGGAAAAGGCAACAGCTGACCAGCTTCTCAAGGATGTAAAAGAGCTTGACGGTTCAATTCAATCACTGAAATT
AACACCTGAACAAATTGTTGCAGGCGCGATGGAGCTTCTGAACGAAGCCGGAATTTCGAAAATCACGGGAGAAGAAGAGC
GCTACTCACGAATTGATTTAGTTGACCTTATGGCAAATGTGGAAGGCTCCGAAGCCGTTTATCAAACAGTGAAAAGCGCG
CTTGTAAAAGATCACTCCGACTTGACGGAAAAACTGGATACGGAGTTCAGCGAATTTGAAGTTTTAATGGCAAAATACAA
AACAAATGATCAGTCCTATACGTCTTATGATAAATTAAGTGAAAAGCAAATCAGAGAGCTGAGCACTAAGCTGACGACTC
TTTCTGAAACCATGTCGAAGATTGCGAATGTGCTATAA

Upstream 100 bases:

>100_bases
TGTACAGCACGATTCCGCAAATGTTGATTTTACTCTTTTTACTGATTGCGCTTGTTTCAGAAGCGGCAAAACATTTTACA
AACGGAAAGGAACTGACAAA

Downstream 100 bases:

>100_bases
AAGGAGTTTTGTAACATCATGAGCGATGAACAGAAAAAGCCAGAACAAATTCACAGACGGGACATTTTAAAATGGGGAGC
GATGGCGGGGGCAGCCGTTG

Product: lipoprotein binding ferrous or ferric iron for transport

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MNFTKIAVSAGCILALCAGCGANDTSSTKEKASSEKSGVTKEITASVNKMETIISKLNDSVEKGDQKEIEKKGKELNSYW
LSFENDIRSDYPFEYTEIEKHLQPIYTEAQKDKPDAGKIKTESESLKASLEDLTEAKKSGKKASDQLAKAADEYKGYVKE
QSDQLVKATEAFTGAVKSGDIEKSKTLYAKARVYYERIEPIAESLGDLDPKIDARENDVEEGDKWTGFHKLEKAIWKDQD
ISGEKATADQLLKDVKELDGSIQSLKLTPEQIVAGAMELLNEAGISKITGEEERYSRIDLVDLMANVEGSEAVYQTVKSA
LVKDHSDLTEKLDTEFSEFEVLMAKYKTNDQSYTSYDKLSEKQIRELSTKLTTLSETMSKIANVL

Sequences:

>Translated_385_residues
MNFTKIAVSAGCILALCAGCGANDTSSTKEKASSEKSGVTKEITASVNKMETIISKLNDSVEKGDQKEIEKKGKELNSYW
LSFENDIRSDYPFEYTEIEKHLQPIYTEAQKDKPDAGKIKTESESLKASLEDLTEAKKSGKKASDQLAKAADEYKGYVKE
QSDQLVKATEAFTGAVKSGDIEKSKTLYAKARVYYERIEPIAESLGDLDPKIDARENDVEEGDKWTGFHKLEKAIWKDQD
ISGEKATADQLLKDVKELDGSIQSLKLTPEQIVAGAMELLNEAGISKITGEEERYSRIDLVDLMANVEGSEAVYQTVKSA
LVKDHSDLTEKLDTEFSEFEVLMAKYKTNDQSYTSYDKLSEKQIRELSTKLTTLSETMSKIANVL
>Mature_385_residues
MNFTKIAVSAGCILALCAGCGANDTSSTKEKASSEKSGVTKEITASVNKMETIISKLNDSVEKGDQKEIEKKGKELNSYW
LSFENDIRSDYPFEYTEIEKHLQPIYTEAQKDKPDAGKIKTESESLKASLEDLTEAKKSGKKASDQLAKAADEYKGYVKE
QSDQLVKATEAFTGAVKSGDIEKSKTLYAKARVYYERIEPIAESLGDLDPKIDARENDVEEGDKWTGFHKLEKAIWKDQD
ISGEKATADQLLKDVKELDGSIQSLKLTPEQIVAGAMELLNEAGISKITGEEERYSRIDLVDLMANVEGSEAVYQTVKSA
LVKDHSDLTEKLDTEFSEFEVLMAKYKTNDQSYTSYDKLSEKQIRELSTKLTTLSETMSKIANVL

Specific function: Unknown

COG id: COG2822

COG function: function code P; Predicted periplasmic lipoprotein involved in iron transport

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0409 family

Homologues:

Organism=Escherichia coli, GI1787254, Length=242, Percent_Identity=44.6280991735537, Blast_Score=202, Evalue=4e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YWBM_BACSU (P39596)

Other databases:

- EMBL:   X73124
- EMBL:   AL009126
- PIR:   S39683
- RefSeq:   NP_391706.1
- ProteinModelPortal:   P39596
- EnsemblBacteria:   EBBACT00000002028
- GeneID:   937322
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU38270
- NMPDR:   fig|224308.1.peg.3832
- GenoList:   BSU38270
- GeneTree:   EBGT00050000001898
- HOGENOM:   HBG532979
- OMA:   GAMELLN
- PhylomeDB:   P39596
- ProtClustDB:   CLSK2392175
- BioCyc:   BSUB:BSU38270-MONOMER
- InterPro:   IPR018976

Pfam domain/function: PF09375 Peptidase_M75

EC number: NA

Molecular weight: Translated: 42796; Mature: 42796

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: PS00197 2FE2S_FER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFTKIAVSAGCILALCAGCGANDTSSTKEKASSEKSGVTKEITASVNKMETIISKLNDS
CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
VEKGDQKEIEKKGKELNSYWLSFENDIRSDYPFEYTEIEKHLQPIYTEAQKDKPDAGKIK
HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
TESESLKASLEDLTEAKKSGKKASDQLAKAADEYKGYVKEQSDQLVKATEAFTGAVKSGD
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
IEKSKTLYAKARVYYERIEPIAESLGDLDPKIDARENDVEEGDKWTGFHKLEKAIWKDQD
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHCCCC
ISGEKATADQLLKDVKELDGSIQSLKLTPEQIVAGAMELLNEAGISKITGEEERYSRIDL
CCCCHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHH
VDLMANVEGSEAVYQTVKSALVKDHSDLTEKLDTEFSEFEVLMAKYKTNDQSYTSYDKLS
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHH
EKQIRELSTKLTTLSETMSKIANVL
HHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNFTKIAVSAGCILALCAGCGANDTSSTKEKASSEKSGVTKEITASVNKMETIISKLNDS
CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
VEKGDQKEIEKKGKELNSYWLSFENDIRSDYPFEYTEIEKHLQPIYTEAQKDKPDAGKIK
HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
TESESLKASLEDLTEAKKSGKKASDQLAKAADEYKGYVKEQSDQLVKATEAFTGAVKSGD
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
IEKSKTLYAKARVYYERIEPIAESLGDLDPKIDARENDVEEGDKWTGFHKLEKAIWKDQD
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHCCCC
ISGEKATADQLLKDVKELDGSIQSLKLTPEQIVAGAMELLNEAGISKITGEEERYSRIDL
CCCCHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHH
VDLMANVEGSEAVYQTVKSALVKDHSDLTEKLDTEFSEFEVLMAKYKTNDQSYTSYDKLS
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHH
EKQIRELSTKLTTLSETMSKIANVL
HHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377