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The map label for this gene is spsC

Identifier: 16080840

GI number: 16080840

Start: 3889732

End: 3890901

Strand: Reverse

Name: spsC

Synonym: BSU37890

Alternate gene names: 16080840

Gene position: 3890901-3889732 (Counterclockwise)

Preceding gene: 255767797

Following gene: 16080839

Centisome position: 92.3

GC content: 48.46

Gene sequence:

>1170_bases
ATGGTGCAAAAGAGAAATCATTTTCTCCCTTACTCATTGCCGTTAATCGGTAAGGAAGAAATTCAGGAGGTTACAGAAAC
GCTTGAATCGGGATGGCTCTCTAAAGGCCCGAAGGTTCAGCAGTTTGAAAAAGAGTTTGCCGCGTTTGTCGGGGCGAAGC
ACGCCGTGGCGGTGAATTCATGTACCGCAGCTTTATTTTTGGCTTTGAAAGCAAAAGGGATTGGGCCCGGGGACGAGGTC
ATTACCTCTCCGCTTACGTTCAGCTCGACCGCCAATACGATTATTCATACGGGAGCGACGCCTGTGTTTGCGGATATTGA
CGAAAACACGCTCAATATTGACCCGGTAAAGCTTGAGGCGGCCGTCACACCGCGAACGAAAGCAGTTGTGCCCGTCCACT
TTGGCGGGCAGTCCTGCGATATGGATGCAATATTGGCTGTTGCCCAAAATCATGGTTTATTCGTGCTGGAGGATGCGGCA
CATGCGGTATATACGACTTATAAGCAAAGAATGATCGGTTCTATCGGGGATGCAACGGCATTCAGCTTTTACGCCACCAA
AAACCTCGCGACAGGGGAAGGCGGCATGCTGACGACTGATGATGAGGAGCTTGCCGATAAGATACGGGTGCTAAGCCTTC
ACGGCATGAGTAAAGCCGCATGGAACCGTTATTCTTCAAATGGCAGCTGGTACTATGAAGTCGAATCGCCCGGCTATAAG
ATGAATATGTTTGATTTGCAGGCGGCCCTCGGACTTCATCAGCTGAAACGGCTGGATGATATGCAGAAACGGAGAGAAGA
GATTGCCGGCCGCTATCAAACCGCTTTTCAGCAGATTCCTGGGCTGATCACGCCGTTTGTCCATGATGACGGCAGGCACG
CCTGGCATCTATATGTTCTGCAAGTTGATGAAAAAAAGGCCGGGGTTACGCGCAGCGAAATGATTACGGCTTTAAAGGAT
GAATACAATATCGGCACTAGCGTTCATTTTATTCCAGTACACATTCATCCGTATTATCAAAAGCAATTTGGATATAAGGA
AGCGGACTTTCCGAATGCCATGAATTACTATAAACGAACCCTTTCTCTCCCGCTCTATCCATCAATGTCTGACGATGATG
TAGATGATGTCATTGAAGCTGTGCGGGATATCGTAAAAGGGGCTGATTAA

Upstream 100 bases:

>100_bases
TGGCAGAATCAACAAATGCTTTATTTGCGGAACTGAAAGCCAAAACAGGGGTTGATTACAGGCGGGAAGATACTGAATAA
AATGATAGGAGCGCAAAGAA

Downstream 100 bases:

>100_bases
GTGTATACGGTAAAAGAAAATGTCTCCAAAGAGGCAATTGAGGAATTTCTCCAAAGCAGAAAGCTTACATTGGATGTTCC
GTATCAATTTTCCCTCGGCC

Product: glutamine-dependent sugar transaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MVQKRNHFLPYSLPLIGKEEIQEVTETLESGWLSKGPKVQQFEKEFAAFVGAKHAVAVNSCTAALFLALKAKGIGPGDEV
ITSPLTFSSTANTIIHTGATPVFADIDENTLNIDPVKLEAAVTPRTKAVVPVHFGGQSCDMDAILAVAQNHGLFVLEDAA
HAVYTTYKQRMIGSIGDATAFSFYATKNLATGEGGMLTTDDEELADKIRVLSLHGMSKAAWNRYSSNGSWYYEVESPGYK
MNMFDLQAALGLHQLKRLDDMQKRREEIAGRYQTAFQQIPGLITPFVHDDGRHAWHLYVLQVDEKKAGVTRSEMITALKD
EYNIGTSVHFIPVHIHPYYQKQFGYKEADFPNAMNYYKRTLSLPLYPSMSDDDVDDVIEAVRDIVKGAD

Sequences:

>Translated_389_residues
MVQKRNHFLPYSLPLIGKEEIQEVTETLESGWLSKGPKVQQFEKEFAAFVGAKHAVAVNSCTAALFLALKAKGIGPGDEV
ITSPLTFSSTANTIIHTGATPVFADIDENTLNIDPVKLEAAVTPRTKAVVPVHFGGQSCDMDAILAVAQNHGLFVLEDAA
HAVYTTYKQRMIGSIGDATAFSFYATKNLATGEGGMLTTDDEELADKIRVLSLHGMSKAAWNRYSSNGSWYYEVESPGYK
MNMFDLQAALGLHQLKRLDDMQKRREEIAGRYQTAFQQIPGLITPFVHDDGRHAWHLYVLQVDEKKAGVTRSEMITALKD
EYNIGTSVHFIPVHIHPYYQKQFGYKEADFPNAMNYYKRTLSLPLYPSMSDDDVDDVIEAVRDIVKGAD
>Mature_389_residues
MVQKRNHFLPYSLPLIGKEEIQEVTETLESGWLSKGPKVQQFEKEFAAFVGAKHAVAVNSCTAALFLALKAKGIGPGDEV
ITSPLTFSSTANTIIHTGATPVFADIDENTLNIDPVKLEAAVTPRTKAVVPVHFGGQSCDMDAILAVAQNHGLFVLEDAA
HAVYTTYKQRMIGSIGDATAFSFYATKNLATGEGGMLTTDDEELADKIRVLSLHGMSKAAWNRYSSNGSWYYEVESPGYK
MNMFDLQAALGLHQLKRLDDMQKRREEIAGRYQTAFQQIPGLITPFVHDDGRHAWHLYVLQVDEKKAGVTRSEMITALKD
EYNIGTSVHFIPVHIHPYYQKQFGYKEADFPNAMNYYKRTLSLPLYPSMSDDDVDDVIEAVRDIVKGAD

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family

Homologues:

Organism=Escherichia coli, GI145693159, Length=384, Percent_Identity=44.7916666666667, Blast_Score=323, Evalue=1e-89,
Organism=Escherichia coli, GI2367285, Length=376, Percent_Identity=32.7127659574468, Blast_Score=179, Evalue=2e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SPSC_BACSU (P39623)

Other databases:

- EMBL:   X73124
- EMBL:   AL009126
- PIR:   S39720
- RefSeq:   NP_391668.1
- ProteinModelPortal:   P39623
- SMR:   P39623
- EnsemblBacteria:   EBBACT00000004098
- GeneID:   937234
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU37890
- NMPDR:   fig|224308.1.peg.3794
- GenoList:   BSU37890
- GeneTree:   EBGT00050000001120
- HOGENOM:   HBG660897
- OMA:   RSEMITA
- PhylomeDB:   P39623
- ProtClustDB:   CLSK876437
- BioCyc:   BSUB:BSU37890-MONOMER
- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422
- Gene3D:   G3DSA:3.40.640.10
- Gene3D:   G3DSA:3.90.1150.10
- PIRSF:   PIRSF000390

Pfam domain/function: PF01041 DegT_DnrJ_EryC1; SSF53383 PyrdxlP-dep_Trfase_major

EC number: NA

Molecular weight: Translated: 43190; Mature: 43190

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQKRNHFLPYSLPLIGKEEIQEVTETLESGWLSKGPKVQQFEKEFAAFVGAKHAVAVNS
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEHHH
CTAALFLALKAKGIGPGDEVITSPLTFSSTANTIIHTGATPVFADIDENTLNIDPVKLEA
HHHHHHHHHHHCCCCCCHHHHCCCCEECCCCCEEEECCCCCEEEECCCCCCCCCCEEEEE
AVTPRTKAVVPVHFGGQSCDMDAILAVAQNHGLFVLEDAAHAVYTTYKQRMIGSIGDATA
EECCCCCEEEEEEECCCCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCHHE
FSFYATKNLATGEGGMLTTDDEELADKIRVLSLHGMSKAAWNRYSSNGSWYYEVESPGYK
EEEEEECCCCCCCCCEEECCHHHHHHHHEEEEECCCCHHHHHHCCCCCCEEEEECCCCCE
MNMFDLQAALGLHQLKRLDDMQKRREEIAGRYQTAFQQIPGLITPFVHDDGRHAWHLYVL
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCEEEEEEEE
QVDEKKAGVTRSEMITALKDEYNIGTSVHFIPVHIHPYYQKQFGYKEADFPNAMNYYKRT
EECCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEEHHHHHHCCCCCCCCCHHHHHHHHH
LSLPLYPSMSDDDVDDVIEAVRDIVKGAD
HCCCCCCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVQKRNHFLPYSLPLIGKEEIQEVTETLESGWLSKGPKVQQFEKEFAAFVGAKHAVAVNS
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEHHH
CTAALFLALKAKGIGPGDEVITSPLTFSSTANTIIHTGATPVFADIDENTLNIDPVKLEA
HHHHHHHHHHHCCCCCCHHHHCCCCEECCCCCEEEECCCCCEEEECCCCCCCCCCEEEEE
AVTPRTKAVVPVHFGGQSCDMDAILAVAQNHGLFVLEDAAHAVYTTYKQRMIGSIGDATA
EECCCCCEEEEEEECCCCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCHHE
FSFYATKNLATGEGGMLTTDDEELADKIRVLSLHGMSKAAWNRYSSNGSWYYEVESPGYK
EEEEEECCCCCCCCCEEECCHHHHHHHHEEEEECCCCHHHHHHCCCCCCEEEEECCCCCE
MNMFDLQAALGLHQLKRLDDMQKRREEIAGRYQTAFQQIPGLITPFVHDDGRHAWHLYVL
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCEEEEEEEE
QVDEKKAGVTRSEMITALKDEYNIGTSVHFIPVHIHPYYQKQFGYKEADFPNAMNYYKRT
EECCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEEHHHHHHCCCCCCCCCHHHHHHHHH
LSLPLYPSMSDDDVDDVIEAVRDIVKGAD
HCCCCCCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377