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The map label for this gene is spsB

Identifier: 255767797

GI number: 255767797

Start: 3890922

End: 3892346

Strand: Reverse

Name: spsB

Synonym: BSU37900

Alternate gene names: 255767797

Gene position: 3892346-3890922 (Counterclockwise)

Preceding gene: 16080842

Following gene: 16080840

Centisome position: 92.33

GC content: 44.84

Gene sequence:

>1425_bases
TTGTCGGCCTATTTAAGCAATTATTGGGTGCTGTACCGGAAGTACGTGGAGCTTTTTGACAAACTTCGCTACAAAGGGAT
TCCGCTTGGGCTTATCAGTAATTTTTATCAATACATCAGCCCTGAACTGAGGGTGATGATGGAAGAAGAACCGGAATTAT
TCGGATCGGTGGATCAGCATATCGATGAGGGACAGATTCAGCCGTTTTTTGAAGAAAGAATCCAAAACATCGTTAAAACA
AATGACGAACCTGTTAAAGGGAAAGTCATTTTGCACTTTGATTACCTGCGTTTTTCAAACGAAAATTACTATCAATTTGA
TCCTGAAAAAACGGCTGTTTTGGCCAGATGGAGTTTGCCGCATTATTGTGATCTGCCTGTAATTAGCAAGCGGGAGATTG
CGGATTCATGCCAAAAAGGCGATTCGAAGCAGTATCTCGAAACAGCCTGTTCGCTTCTCGCCCCTTATGATGATCACCCG
GCATTTGGTGATCAAGCGTTTCGCGACCGGCTTTTCAAAGATATTCCTTTATTTATAGAGGCCATTGATACAGTTGATGC
GCTGTTTGAACAGGAAAAGATTTCAGCTGTTATTGTCGGAACGGCAGAAGACATTTACAGCAGGGTGCTCGCTCTCATGT
GTCAAAGAAAAGGGGCCGTCAGCATTTGTCTTCAGCATGGCGCATTGATGGGAGATGAAGCCTTCATTCCTGTTTTTACA
ACCTATCAAGCTGTTTTTGGTGCGTATGAAGCAGAGTGGTTCATACGAAAAGGCTGTAAACCCGAGCAGATTCTCGTAAC
GGGACATCCCCGCTTCGATCAGATTTTTAACAGAACGCCTATGGATATGTCCATATTCTATCGAAAACTTGCTTTTCAGC
CGACTAAAAAAATTGTGCTCATTGCCACTCAGCCCTTTTCAGAAGACTTTTATTCCGGTGTGCTGCAGGGGCTTTCTGAT
CAGAAGCAGCTGCAAATCATTATCAAACCCCACCCGTGGGAAATCGGAAAAAACAAGCTTGATCTGTATCACGAGGCGGC
GAAAAAACATCAAGCATGCAGAGTCATCAAAAAGGAGCTGGAGCTTTATGATTTGCTGCCGTATGTTGATGCCGCAGTGA
CGCAAACCTCGACAGTCGGTCTTGAAGCCATGCTGTTTCAAAAGCCTGTGCTGATAGGAAAATCGTCCGGAAATCGCTCG
TATCCGTATTATGAGTCTCTTGGCGATTTTATGTTTGACCAGCCGGATGAACTGGCGCACACCTTGGTTGAGGTTCTTCG
AAGTCCCGACGTGCATCAAAAAGCAGAAGAGGCGCGCCTGGCATTCATAGCGGCTAATTATCCGGTGGCAGAATCAACAA
ATGCTTTATTTGCGGAACTGAAAGCCAAAACAGGGGTTGATTACAGGCGGGAAGATACTGAATAA

Upstream 100 bases:

>100_bases
TTTGAATTAGAAAAAAATGAATTTGTCAGGAACCTTCCTCCGCAGCGAAATTGCCGAGAGCTGCGTGAATCATTAAAAAA
GCTTGGAATGGGGTGAGAGC

Downstream 100 bases:

>100_bases
AATGATAGGAGCGCAAAGAAATGGTGCAAAAGAGAAATCATTTTCTCCCTTACTCATTGCCGTTAATCGGTAAGGAAGAA
ATTCAGGAGGTTACAGAAAC

Product: dTDP glycosyl/glycerophosphate transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 474; Mature: 473

Protein sequence:

>474_residues
MSAYLSNYWVLYRKYVELFDKLRYKGIPLGLISNFYQYISPELRVMMEEEPELFGSVDQHIDEGQIQPFFEERIQNIVKT
NDEPVKGKVILHFDYLRFSNENYYQFDPEKTAVLARWSLPHYCDLPVISKREIADSCQKGDSKQYLETACSLLAPYDDHP
AFGDQAFRDRLFKDIPLFIEAIDTVDALFEQEKISAVIVGTAEDIYSRVLALMCQRKGAVSICLQHGALMGDEAFIPVFT
TYQAVFGAYEAEWFIRKGCKPEQILVTGHPRFDQIFNRTPMDMSIFYRKLAFQPTKKIVLIATQPFSEDFYSGVLQGLSD
QKQLQIIIKPHPWEIGKNKLDLYHEAAKKHQACRVIKKELELYDLLPYVDAAVTQTSTVGLEAMLFQKPVLIGKSSGNRS
YPYYESLGDFMFDQPDELAHTLVEVLRSPDVHQKAEEARLAFIAANYPVAESTNALFAELKAKTGVDYRREDTE

Sequences:

>Translated_474_residues
MSAYLSNYWVLYRKYVELFDKLRYKGIPLGLISNFYQYISPELRVMMEEEPELFGSVDQHIDEGQIQPFFEERIQNIVKT
NDEPVKGKVILHFDYLRFSNENYYQFDPEKTAVLARWSLPHYCDLPVISKREIADSCQKGDSKQYLETACSLLAPYDDHP
AFGDQAFRDRLFKDIPLFIEAIDTVDALFEQEKISAVIVGTAEDIYSRVLALMCQRKGAVSICLQHGALMGDEAFIPVFT
TYQAVFGAYEAEWFIRKGCKPEQILVTGHPRFDQIFNRTPMDMSIFYRKLAFQPTKKIVLIATQPFSEDFYSGVLQGLSD
QKQLQIIIKPHPWEIGKNKLDLYHEAAKKHQACRVIKKELELYDLLPYVDAAVTQTSTVGLEAMLFQKPVLIGKSSGNRS
YPYYESLGDFMFDQPDELAHTLVEVLRSPDVHQKAEEARLAFIAANYPVAESTNALFAELKAKTGVDYRREDTE
>Mature_473_residues
SAYLSNYWVLYRKYVELFDKLRYKGIPLGLISNFYQYISPELRVMMEEEPELFGSVDQHIDEGQIQPFFEERIQNIVKTN
DEPVKGKVILHFDYLRFSNENYYQFDPEKTAVLARWSLPHYCDLPVISKREIADSCQKGDSKQYLETACSLLAPYDDHPA
FGDQAFRDRLFKDIPLFIEAIDTVDALFEQEKISAVIVGTAEDIYSRVLALMCQRKGAVSICLQHGALMGDEAFIPVFTT
YQAVFGAYEAEWFIRKGCKPEQILVTGHPRFDQIFNRTPMDMSIFYRKLAFQPTKKIVLIATQPFSEDFYSGVLQGLSDQ
KQLQIIIKPHPWEIGKNKLDLYHEAAKKHQACRVIKKELELYDLLPYVDAAVTQTSTVGLEAMLFQKPVLIGKSSGNRSY
PYYESLGDFMFDQPDELAHTLVEVLRSPDVHQKAEEARLAFIAANYPVAESTNALFAELKAKTGVDYRREDTE

Specific function: Unknown

COG id: COG1887

COG function: function code M; Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SPSB_BACSU (P39622)

Other databases:

- EMBL:   X73124
- EMBL:   AL009126
- PIR:   S39719
- RefSeq:   NP_391669.2
- ProteinModelPortal:   P39622
- EnsemblBacteria:   EBBACT00000000814
- GeneID:   937239
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU37900
- NMPDR:   fig|224308.1.peg.3795
- GenoList:   BSU37900
- GeneTree:   EBGT00050000002997
- HOGENOM:   HBG338446
- ProtClustDB:   CLSK888084
- BioCyc:   BSUB:BSU37900-MONOMER
- InterPro:   IPR007833

Pfam domain/function: PF05159 Capsule_synth

EC number: NA

Molecular weight: Translated: 54508; Mature: 54377

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAYLSNYWVLYRKYVELFDKLRYKGIPLGLISNFYQYISPELRVMMEEEPELFGSVDQH
CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHEEHCCCCCHHHHHHHHH
IDEGQIQPFFEERIQNIVKTNDEPVKGKVILHFDYLRFSNENYYQFDPEKTAVLARWSLP
CCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCEEECCCCEEEEEECCCC
HYCDLPVISKREIADSCQKGDSKQYLETACSLLAPYDDHPAFGDQAFRDRLFKDIPLFIE
CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
AIDTVDALFEQEKISAVIVGTAEDIYSRVLALMCQRKGAVSICLQHGALMGDEAFIPVFT
HHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEHHHH
TYQAVFGAYEAEWFIRKGCKPEQILVTGHPRFDQIFNRTPMDMSIFYRKLAFQPTKKIVL
HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHCCCCCHHHHHHHHHHCCCCCCEEE
IATQPFSEDFYSGVLQGLSDQKQLQIIIKPHPWEIGKNKLDLYHEAAKKHQACRVIKKEL
EEECCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ELYDLLPYVDAAVTQTSTVGLEAMLFQKPVLIGKSSGNRSYPYYESLGDFMFDQPDELAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHCCCHHHHHH
TLVEVLRSPDVHQKAEEARLAFIAANYPVAESTNALFAELKAKTGVDYRREDTE
HHHHHHCCCCHHHHHHHCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SAYLSNYWVLYRKYVELFDKLRYKGIPLGLISNFYQYISPELRVMMEEEPELFGSVDQH
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHEEHCCCCCHHHHHHHHH
IDEGQIQPFFEERIQNIVKTNDEPVKGKVILHFDYLRFSNENYYQFDPEKTAVLARWSLP
CCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCEEECCCCEEEEEECCCC
HYCDLPVISKREIADSCQKGDSKQYLETACSLLAPYDDHPAFGDQAFRDRLFKDIPLFIE
CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
AIDTVDALFEQEKISAVIVGTAEDIYSRVLALMCQRKGAVSICLQHGALMGDEAFIPVFT
HHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEHHHH
TYQAVFGAYEAEWFIRKGCKPEQILVTGHPRFDQIFNRTPMDMSIFYRKLAFQPTKKIVL
HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHCCCCCHHHHHHHHHHCCCCCCEEE
IATQPFSEDFYSGVLQGLSDQKQLQIIIKPHPWEIGKNKLDLYHEAAKKHQACRVIKKEL
EEECCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ELYDLLPYVDAAVTQTSTVGLEAMLFQKPVLIGKSSGNRSYPYYESLGDFMFDQPDELAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHCCCHHHHHH
TLVEVLRSPDVHQKAEEARLAFIAANYPVAESTNALFAELKAKTGVDYRREDTE
HHHHHHCCCCHHHHHHHCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377