Click here to switch to the map view.

The map label for this gene is ywlA

Identifier: 16080751

GI number: 16080751

Start: 3795491

End: 3795853

Strand: Direct

Name: ywlA

Synonym: BSU36980

Alternate gene names: 16080751

Gene position: 3795491-3795853 (Clockwise)

Preceding gene: 16080732

Following gene: 16080755

Centisome position: 90.03

GC content: 37.19

Gene sequence:

>363_bases
ATGAAATACAATTATACAGTGCTGTTATCAGCATTCACGATGTCCGTTCTTTATTCAGTAATTTATATTCATTCATTTAT
CATTGCCGCTCTCATCACAATGGCATTTTATTTTCTGTTTCCTTATTTGATCTTCGCACTGCCGCTTCAAATCATGATGA
ATAAAAAGCCGAAACGTTTCAGCCCTTTGTATCTGCTGTATTACCTTGCCGCTGCTTTTATTGCCAACGCGATCATTTTC
GGCATGCTTCAGCCTTCGGGACAATCTCTGTTTCAAAATACAGCCTTTTATCTTTTCGCTGTATTAACAGCTCTTATCTA
TTGGATATGGGATTCTGTTTTACTGCAAAAAAAGGAAGCCTAA

Upstream 100 bases:

>100_bases
ATTATGGACAAGGAGAGCCTGGGATAAACGTGCAGGGTGAAAAAAATCTAGCAAGCTGTTAATCTTATTTATGGTACGAT
AGTGTTTTAGGAGGTTTAAG

Downstream 100 bases:

>100_bases
GAGGCTTCCTTTTTTATTAAAACAAAATCGTCAGTAAATAACATAGAATGGAAGGTATCGCCGCAACAAAGAAAGCGGCC
GCCATTTTCATGCGAGATGT

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MKYNYTVLLSAFTMSVLYSVIYIHSFIIAALITMAFYFLFPYLIFALPLQIMMNKKPKRFSPLYLLYYLAAAFIANAIIF
GMLQPSGQSLFQNTAFYLFAVLTALIYWIWDSVLLQKKEA

Sequences:

>Translated_120_residues
MKYNYTVLLSAFTMSVLYSVIYIHSFIIAALITMAFYFLFPYLIFALPLQIMMNKKPKRFSPLYLLYYLAAAFIANAIIF
GMLQPSGQSLFQNTAFYLFAVLTALIYWIWDSVLLQKKEA
>Mature_120_residues
MKYNYTVLLSAFTMSVLYSVIYIHSFIIAALITMAFYFLFPYLIFALPLQIMMNKKPKRFSPLYLLYYLAAAFIANAIIF
GMLQPSGQSLFQNTAFYLFAVLTALIYWIWDSVLLQKKEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0715 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YWLA_BACSU (P39150)

Other databases:

- EMBL:   Z38002
- EMBL:   AL009126
- PIR:   I40473
- RefSeq:   NP_391579.1
- ProteinModelPortal:   P39150
- EnsemblBacteria:   EBBACT00000003648
- GeneID:   938509
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU36980
- NMPDR:   fig|224308.1.peg.3705
- GenoList:   BSU36980
- GeneTree:   EBGT00050000001385
- HOGENOM:   HBG338408
- OMA:   FPYLIFA
- ProtClustDB:   CLSK2752539
- BioCyc:   BSUB:BSU36980-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13943; Mature: 13943

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x12c0a3d0)-; HASH(0x114dd3d0)-; HASH(0x11e905c8)-; HASH(0xd29b21c)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYNYTVLLSAFTMSVLYSVIYIHSFIIAALITMAFYFLFPYLIFALPLQIMMNKKPKRF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SPLYLLYYLAAAFIANAIIFGMLQPSGQSLFQNTAFYLFAVLTALIYWIWDSVLLQKKEA
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MKYNYTVLLSAFTMSVLYSVIYIHSFIIAALITMAFYFLFPYLIFALPLQIMMNKKPKRF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SPLYLLYYLAAAFIANAIIFGMLQPSGQSLFQNTAFYLFAVLTALIYWIWDSVLLQKKEA
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377