The gene/protein map for NC_000964 is currently unavailable.
Definition Bacillus subtilis subsp. subtilis str. 168 chromosome, complete genome.
Accession NC_000964
Length 4,215,606

Click here to switch to the map view.

The map label for this gene is atpD

Identifier: 16080734

GI number: 16080734

Start: 3781491

End: 3782912

Strand: Reverse

Name: atpD

Synonym: BSU36810

Alternate gene names: 16080734

Gene position: 3782912-3781491 (Counterclockwise)

Preceding gene: 16080735

Following gene: 16080733

Centisome position: 89.74

GC content: 47.33

Gene sequence:

>1422_bases
ATGAAGAAAGGACGCGTTAGCCAGGTATTAGGACCGGTCGTCGACGTGCGTTTTGAAGACGGTCACTTGCCTGAAATTTA
TAATGCGATTAAAATTTCACAGCCAGCTGCAAGTGAAAACGAAGTAGGTATTGATTTAACGCTTGAGGTCGCTCTTCATT
TAGGTGATGATACAGTCCGTACAATCGCAATGGCATCTACAGATGGTGTTCAGCGCGGTATGGAAGCTGTAGATACAGGA
GCGCCAATCTCAGTACCGGTTGGTGATGTAACACTTGGACGTGTATTTAACGTTCTCGGAGAAAATATTGATTTGAATGA
GCCGGTTCCTGCGGATGCGAAAAAGGATCCGATTCACAGACAGGCGCCTTCATTCGATCAGCTTTCAACAGAAGTTGAAA
TTCTTGAAACAGGTATTAAAGTTGTTGATTTGCTTGCTCCTTACATTAAGGGCGGTAAAATCGGATTGTTCGGTGGTGCC
GGTGTAGGTAAAACCGTATTAATCCAGGAATTAATCAACAACATCGCGCAAGAGCACGGCGGTATCTCTGTATTCGCCGG
CGTAGGAGAGCGTACTCGTGAAGGGAACGACCTTTTCTACGAAATGAGTGACTCTGGCGTAATCAACAAAACAGCCATGG
TATTCGGACAAATGAACGAGCCGCCGGGCGCACGTATGCGTGTTGCTTTGACAGGCCTTACAATGGCTGAGCACTTCCGT
GATGTACAAGGACAGGACGTACTGTTCTTCATCGATAACATTTTCCGTTTCACACAAGCGGGTTCAGAGGTTTCAGCCCT
TCTTGGCCGTATGCCTTCAGCGGTTGGTTATCAGCCGACGCTTGCAACTGAGATGGGTCAGCTCCAAGAGCGTATCACGT
CTACGAACGTTGGATCAGTTACATCTATCCAGGCGATCTACGTGCCTGCCGATGACTACACTGACCCGGCGCCGGCGACA
ACGTTCGCTCACTTGGATGCGACAACAAACCTTGAGCGTAAATTAACTGAAATGGGTATTTACCCTGCGGTTGATCCGTT
GGCATCTACATCACGCGCCCTTGCTCCTGAAATTGTTGGAGAAGAGCACTATGCGGTTGCGCGTGAAGTACAGTCAACGC
TTCAGCGTTACAAAGAGCTTCAGGATATCATTGCGATTCTCGGTATGGATGAATTAGGCGAGGAAGACAAACTTGTCGTT
CACCGCGCACGTCGTATCCAGTTCTTCCTTTCTCAGAACTTCCACGTGGCTGAACAGTTCACTGGACAAAAAGGTTCTTA
CGTGCCTGTAAAAGAGACGGTACAAGGCTTCAAAGAAATCTTAGCCGGTAAATATGACCATCTTCCAGAAGATGCATTCC
GTCTTGTAGGCCGTATCGAAGAAGTTGTTGAGAAAGCAAAAGAAATGGGTGTAGAAGTTTAA

Upstream 100 bases:

>100_bases
TACAACCGCGCTCGCCAAGCAGCCATCACACAAGAAATTACGGAAATTGTCGGCGGAGCAGCCGCTTTAGAATAGAAAGA
TTTTGTCAGGAGGGATAGCG

Downstream 100 bases:

>100_bases
TCTGGTCCTAGGAGGGTAAAAGCATGAAGACCGTTAAAGTCAATATCGTTACTCCCGACGGCCCAGTATACGATGCGGAT
ATCGAAATGGTGAGTGTGAG

Product: F0F1 ATP synthase subunit beta

Products: NA

Alternate protein names: ATP synthase F1 sector subunit beta; F-ATPase subunit beta [H]

Number of amino acids: Translated: 473; Mature: 473

Protein sequence:

>473_residues
MKKGRVSQVLGPVVDVRFEDGHLPEIYNAIKISQPAASENEVGIDLTLEVALHLGDDTVRTIAMASTDGVQRGMEAVDTG
APISVPVGDVTLGRVFNVLGENIDLNEPVPADAKKDPIHRQAPSFDQLSTEVEILETGIKVVDLLAPYIKGGKIGLFGGA
GVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLFYEMSDSGVINKTAMVFGQMNEPPGARMRVALTGLTMAEHFR
DVQGQDVLFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERITSTNVGSVTSIQAIYVPADDYTDPAPAT
TFAHLDATTNLERKLTEMGIYPAVDPLASTSRALAPEIVGEEHYAVAREVQSTLQRYKELQDIIAILGMDELGEEDKLVV
HRARRIQFFLSQNFHVAEQFTGQKGSYVPVKETVQGFKEILAGKYDHLPEDAFRLVGRIEEVVEKAKEMGVEV

Sequences:

>Translated_473_residues
MKKGRVSQVLGPVVDVRFEDGHLPEIYNAIKISQPAASENEVGIDLTLEVALHLGDDTVRTIAMASTDGVQRGMEAVDTG
APISVPVGDVTLGRVFNVLGENIDLNEPVPADAKKDPIHRQAPSFDQLSTEVEILETGIKVVDLLAPYIKGGKIGLFGGA
GVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLFYEMSDSGVINKTAMVFGQMNEPPGARMRVALTGLTMAEHFR
DVQGQDVLFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERITSTNVGSVTSIQAIYVPADDYTDPAPAT
TFAHLDATTNLERKLTEMGIYPAVDPLASTSRALAPEIVGEEHYAVAREVQSTLQRYKELQDIIAILGMDELGEEDKLVV
HRARRIQFFLSQNFHVAEQFTGQKGSYVPVKETVQGFKEILAGKYDHLPEDAFRLVGRIEEVVEKAKEMGVEV
>Mature_473_residues
MKKGRVSQVLGPVVDVRFEDGHLPEIYNAIKISQPAASENEVGIDLTLEVALHLGDDTVRTIAMASTDGVQRGMEAVDTG
APISVPVGDVTLGRVFNVLGENIDLNEPVPADAKKDPIHRQAPSFDQLSTEVEILETGIKVVDLLAPYIKGGKIGLFGGA
GVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLFYEMSDSGVINKTAMVFGQMNEPPGARMRVALTGLTMAEHFR
DVQGQDVLFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERITSTNVGSVTSIQAIYVPADDYTDPAPAT
TFAHLDATTNLERKLTEMGIYPAVDPLASTSRALAPEIVGEEHYAVAREVQSTLQRYKELQDIIAILGMDELGEEDKLVV
HRARRIQFFLSQNFHVAEQFTGQKGSYVPVKETVQGFKEILAGKYDHLPEDAFRLVGRIEEVVEKAKEMGVEV

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits [H]

COG id: COG0055

COG function: function code C; F0F1-type ATP synthase, beta subunit

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family [H]

Homologues:

Organism=Homo sapiens, GI32189394, Length=475, Percent_Identity=68.4210526315789, Blast_Score=632, Evalue=0.0,
Organism=Homo sapiens, GI19913424, Length=319, Percent_Identity=27.5862068965517, Blast_Score=123, Evalue=4e-28,
Organism=Homo sapiens, GI19913428, Length=358, Percent_Identity=24.8603351955307, Blast_Score=96, Evalue=1e-19,
Organism=Homo sapiens, GI50345984, Length=314, Percent_Identity=26.4331210191083, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI4757810, Length=314, Percent_Identity=26.4331210191083, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI19913426, Length=355, Percent_Identity=25.0704225352113, Blast_Score=94, Evalue=3e-19,
Organism=Escherichia coli, GI1790170, Length=469, Percent_Identity=64.6055437100213, Blast_Score=607, Evalue=1e-175,
Organism=Escherichia coli, GI1788251, Length=325, Percent_Identity=29.8461538461538, Blast_Score=129, Evalue=5e-31,
Organism=Escherichia coli, GI1790172, Length=351, Percent_Identity=26.7806267806268, Blast_Score=106, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI25144756, Length=472, Percent_Identity=64.8305084745763, Blast_Score=599, Evalue=1e-171,
Organism=Caenorhabditis elegans, GI17565854, Length=352, Percent_Identity=28.125, Blast_Score=131, Evalue=6e-31,
Organism=Caenorhabditis elegans, GI71988080, Length=378, Percent_Identity=26.7195767195767, Blast_Score=106, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI71988063, Length=378, Percent_Identity=26.7195767195767, Blast_Score=105, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI17510931, Length=337, Percent_Identity=24.9258160237389, Blast_Score=101, Evalue=7e-22,
Organism=Caenorhabditis elegans, GI17570191, Length=414, Percent_Identity=23.9130434782609, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI71988074, Length=330, Percent_Identity=25.7575757575758, Blast_Score=82, Evalue=5e-16,
Organism=Saccharomyces cerevisiae, GI6322581, Length=465, Percent_Identity=68.6021505376344, Blast_Score=625, Evalue=1e-180,
Organism=Saccharomyces cerevisiae, GI6319603, Length=342, Percent_Identity=25.7309941520468, Blast_Score=97, Evalue=6e-21,
Organism=Saccharomyces cerevisiae, GI6319370, Length=378, Percent_Identity=27.2486772486773, Blast_Score=87, Evalue=5e-18,
Organism=Saccharomyces cerevisiae, GI6320016, Length=238, Percent_Identity=27.3109243697479, Blast_Score=87, Evalue=7e-18,
Organism=Drosophila melanogaster, GI24638766, Length=476, Percent_Identity=67.6470588235294, Blast_Score=627, Evalue=1e-180,
Organism=Drosophila melanogaster, GI28574560, Length=474, Percent_Identity=64.5569620253165, Blast_Score=595, Evalue=1e-170,
Organism=Drosophila melanogaster, GI20129479, Length=347, Percent_Identity=27.0893371757925, Blast_Score=132, Evalue=5e-31,
Organism=Drosophila melanogaster, GI24583988, Length=352, Percent_Identity=26.9886363636364, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI24583986, Length=352, Percent_Identity=26.9886363636364, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI24583984, Length=352, Percent_Identity=26.9886363636364, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI24583992, Length=321, Percent_Identity=26.791277258567, Blast_Score=121, Evalue=1e-27,
Organism=Drosophila melanogaster, GI281361666, Length=405, Percent_Identity=25.1851851851852, Blast_Score=101, Evalue=9e-22,
Organism=Drosophila melanogaster, GI24646341, Length=405, Percent_Identity=25.1851851851852, Blast_Score=101, Evalue=9e-22,
Organism=Drosophila melanogaster, GI17136796, Length=405, Percent_Identity=25.1851851851852, Blast_Score=101, Evalue=9e-22,
Organism=Drosophila melanogaster, GI24658560, Length=378, Percent_Identity=26.7195767195767, Blast_Score=96, Evalue=5e-20,
Organism=Drosophila melanogaster, GI24638768, Length=99, Percent_Identity=48.4848484848485, Blast_Score=90, Evalue=3e-18,

Paralogues:

None

Copy number: 10836 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR003593
- InterPro:   IPR005722
- InterPro:   IPR018118
- InterPro:   IPR000793
- InterPro:   IPR004100 [H]

Pfam domain/function: PF00006 ATP-synt_ab; PF00306 ATP-synt_ab_C; PF02874 ATP-synt_ab_N [H]

EC number: =3.6.3.14 [H]

Molecular weight: Translated: 51421; Mature: 51421

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MKKGRVSQVLGPVVDVRFEDGHLPEIYNAIKISQPAASENEVGIDLTLEVALHLGDDTVR
CCCCCHHHHHCCHHEEEECCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECCCCHHH
TIAMASTDGVQRGMEAVDTGAPISVPVGDVTLGRVFNVLGENIDLNEPVPADAKKDPIHR
HEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
QAPSFDQLSTEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCC
GISVFAGVGERTREGNDLFYEMSDSGVINKTAMVFGQMNEPPGARMRVALTGLTMAEHFR
CEEEEECCCCCCCCCCCEEEEECCCCCEEHHHHEEECCCCCCCCEEEEEEEHHHHHHHHH
DVQGQDVLFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERITSTNVGSV
CCCCCEEEHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
TSIQAIYVPADDYTDPAPATTFAHLDATTNLERKLTEMGIYPAVDPLASTSRALAPEIVG
EEEEEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCHHHHC
EEHYAVAREVQSTLQRYKELQDIIAILGMDELGEEDKLVVHRARRIQFFLSQNFHVAEQF
CHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHH
TGQKGSYVPVKETVQGFKEILAGKYDHLPEDAFRLVGRIEEVVEKAKEMGVEV
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKKGRVSQVLGPVVDVRFEDGHLPEIYNAIKISQPAASENEVGIDLTLEVALHLGDDTVR
CCCCCHHHHHCCHHEEEECCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECCCCHHH
TIAMASTDGVQRGMEAVDTGAPISVPVGDVTLGRVFNVLGENIDLNEPVPADAKKDPIHR
HEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
QAPSFDQLSTEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCC
GISVFAGVGERTREGNDLFYEMSDSGVINKTAMVFGQMNEPPGARMRVALTGLTMAEHFR
CEEEEECCCCCCCCCCCEEEEECCCCCEEHHHHEEECCCCCCCCEEEEEEEHHHHHHHHH
DVQGQDVLFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERITSTNVGSV
CCCCCEEEHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
TSIQAIYVPADDYTDPAPATTFAHLDATTNLERKLTEMGIYPAVDPLASTSRALAPEIVG
EEEEEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCHHHHC
EEHYAVAREVQSTLQRYKELQDIIAILGMDELGEEDKLVVHRARRIQFFLSQNFHVAEQF
CHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHH
TGQKGSYVPVKETVQGFKEILAGKYDHLPEDAFRLVGRIEEVVEKAKEMGVEV
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA