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The map label for this gene is atpC

Identifier: 16080733

GI number: 16080733

Start: 3781069

End: 3781467

Strand: Reverse

Name: atpC

Synonym: BSU36800

Alternate gene names: 16080733

Gene position: 3781467-3781069 (Counterclockwise)

Preceding gene: 16080734

Following gene: 16080731

Centisome position: 89.7

GC content: 52.63

Gene sequence:

>399_bases
ATGAAGACCGTTAAAGTCAATATCGTTACTCCCGACGGCCCAGTATACGATGCGGATATCGAAATGGTGAGTGTGAGAGC
CGAAAGCGGCGATCTCGGTATTTTGCCAGGCCATATTCCAACCGTGGCTCCTCTTAAAATCGGCGCTGTCCGTCTGAAAA
AAGACGGGCAGACTGAAATGGTTGCCGTCAGCGGCGGTTTTGTAGAAGTCCGTCCTGATCATGTCACCATCCTTGCCCAG
GCTGCCGAGACAGCGGAAGGCATCGATAAAGAGCGCGCTGAAGCTGCACGCCAGCGGGCGCAGGAGCGTTTGAATTCTCA
ATCAGATGATACTGACATTCGTCGGGCTGAGCTTGCGTTACAGCGGGCTTTGAACAGATTGGATGTAGCAGGGAAATAA

Upstream 100 bases:

>100_bases
CAGAAGATGCATTCCGTCTTGTAGGCCGTATCGAAGAAGTTGTTGAGAAAGCAAAAGAAATGGGTGTAGAAGTTTAATCT
GGTCCTAGGAGGGTAAAAGC

Downstream 100 bases:

>100_bases
GAAAAAATCCTTCTCTTTATGAGAAGGATTTTTTTATGAACGCACAAGAGAATCAAACAGCGACAGCAACGGGCGATCCT
CTTTTGGACGCAGGTATAAA

Product: F0F1 ATP synthase subunit epsilon

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MKTVKVNIVTPDGPVYDADIEMVSVRAESGDLGILPGHIPTVAPLKIGAVRLKKDGQTEMVAVSGGFVEVRPDHVTILAQ
AAETAEGIDKERAEAARQRAQERLNSQSDDTDIRRAELALQRALNRLDVAGK

Sequences:

>Translated_132_residues
MKTVKVNIVTPDGPVYDADIEMVSVRAESGDLGILPGHIPTVAPLKIGAVRLKKDGQTEMVAVSGGFVEVRPDHVTILAQ
AAETAEGIDKERAEAARQRAQERLNSQSDDTDIRRAELALQRALNRLDVAGK
>Mature_132_residues
MKTVKVNIVTPDGPVYDADIEMVSVRAESGDLGILPGHIPTVAPLKIGAVRLKKDGQTEMVAVSGGFVEVRPDHVTILAQ
AAETAEGIDKERAEAARQRAQERLNSQSDDTDIRRAELALQRALNRLDVAGK

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family

Homologues:

Organism=Escherichia coli, GI1790169, Length=128, Percent_Identity=33.59375, Blast_Score=87, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPE_BACSU (P37812)

Other databases:

- EMBL:   Z28592
- EMBL:   AL009126
- EMBL:   Z81356
- PIR:   I40369
- RefSeq:   NP_391561.1
- ProteinModelPortal:   P37812
- SMR:   P37812
- EnsemblBacteria:   EBBACT00000001174
- GeneID:   936994
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU36800
- NMPDR:   fig|224308.1.peg.3687
- GenoList:   BSU36800
- GeneTree:   EBGT00050000001943
- HOGENOM:   HBG663981
- OMA:   EMVSVRA
- PhylomeDB:   P37812
- ProtClustDB:   PRK00571
- BioCyc:   BSUB:BSU36800-MONOMER
- BRENDA:   3.6.3.14
- HAMAP:   MF_00530
- InterPro:   IPR001469
- InterPro:   IPR020547
- InterPro:   IPR020546
- Gene3D:   G3DSA:1.20.5.440
- Gene3D:   G3DSA:2.60.15.10
- PANTHER:   PTHR13822
- ProDom:   PD000944
- TIGRFAMs:   TIGR01216

Pfam domain/function: PF00401 ATP-synt_DE; PF02823 ATP-synt_DE_N; SSF46604 ATPsynt_DE; SSF51344 ATPsynt_DE

EC number: 3.6.3.14

Molecular weight: Translated: 14209; Mature: 14209

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTVKVNIVTPDGPVYDADIEMVSVRAESGDLGILPGHIPTVAPLKIGAVRLKKDGQTEM
CCEEEEEEECCCCCEEECCEEEEEEEECCCCEEEECCCCCCCCCEEECEEEECCCCCEEE
VAVSGGFVEVRPDHVTILAQAAETAEGIDKERAEAARQRAQERLNSQSDDTDIRRAELAL
EEEECCEEEECCCEEEEEEEHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
QRALNRLDVAGK
HHHHHHHCCCCC
>Mature Secondary Structure
MKTVKVNIVTPDGPVYDADIEMVSVRAESGDLGILPGHIPTVAPLKIGAVRLKKDGQTEM
CCEEEEEEECCCCCEEECCEEEEEEEECCCCEEEECCCCCCCCCEEECEEEECCCCCEEE
VAVSGGFVEVRPDHVTILAQAAETAEGIDKERAEAARQRAQERLNSQSDDTDIRRAELAL
EEEECCEEEECCCEEEEEEEHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
QRALNRLDVAGK
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7961438; 9384377; 8755892