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The map label for this gene is ywmC

Identifier: 16080727

GI number: 16080727

Start: 3775653

End: 3776336

Strand: Reverse

Name: ywmC

Synonym: BSU36740

Alternate gene names: 16080727

Gene position: 3776336-3775653 (Counterclockwise)

Preceding gene: 16080728

Following gene: 16080726

Centisome position: 89.58

GC content: 42.69

Gene sequence:

>684_bases
ATGAAGAAAAGATTTTCACTGATCATGATGACAGGATTGCTTTTTGGATTAACTTCACCTGCTTTTGCAGCTGAAAAGAC
AGAAACGGAGGCTAAAGCGCCGGCGAACGTGGCGGTCTTGCTTGATGCCAGCGGAAGTATGGCGAAAAGAATAGATGGTG
TATCTAAATTTAATTCAGCCAAAAAAGAAATTTCAAAGTTTGCGAGCTCATTGCCAGAAGGAACTCAGGTGAAAATGAGC
GTGTTTGGCTCTGAAGGAAACAATAAAAATTCCGGAAAAGTTCAGTCATGTGAAGCCATTCGCAACGTATACGGCTTCCA
AAGCTTTAACGAGCAAAGCTTCCTCAATTCTCTCAATACAATTGGGCCGACTGGCTGGACGCCAATTGCCAAAGCGCTGA
ACGAGGCGAAATCTTCTTTTGACCAGCTTGATGCAAAAGGGGAAAAAGTGGTGTATCTGTTGACAGACGGTGAGGAAACG
TGCGGAGGAAACCCGATTAAAACAGCAAAGGAACTGCAAAAAGACAATATCACTGTTAATGTGATCGGCTTTGATTATAA
AGAGGGATACAAAGGCCAGCTGAACGCAATTGCGAAAGTAGGCGGCGGTGAATACTTCCCGGCTTATACCCAAAAAGATG
TTGAGAAAATTTTCACTCAGCAATCACTAATGTTATCTAAATAA

Upstream 100 bases:

>100_bases
AAGCCCGCCCTATTTATTTCTCGGTTTTTGTTGATTACGATAGATTATGTTCAGCGTTGAACATCTGCACGCAGAAACAA
ATTGGTAAAGGGGTACGAAC

Downstream 100 bases:

>100_bases
GAAAAAAGAGGCTGGTGATGGTCAGCCTCTTTTTGTATGTAACAAAAACTTCAAAACTAATTAGCTGTCTGCCTGTAGCA
TAGTAGCAGATTTCCGTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MKKRFSLIMMTGLLFGLTSPAFAAEKTETEAKAPANVAVLLDASGSMAKRIDGVSKFNSAKKEISKFASSLPEGTQVKMS
VFGSEGNNKNSGKVQSCEAIRNVYGFQSFNEQSFLNSLNTIGPTGWTPIAKALNEAKSSFDQLDAKGEKVVYLLTDGEET
CGGNPIKTAKELQKDNITVNVIGFDYKEGYKGQLNAIAKVGGGEYFPAYTQKDVEKIFTQQSLMLSK

Sequences:

>Translated_227_residues
MKKRFSLIMMTGLLFGLTSPAFAAEKTETEAKAPANVAVLLDASGSMAKRIDGVSKFNSAKKEISKFASSLPEGTQVKMS
VFGSEGNNKNSGKVQSCEAIRNVYGFQSFNEQSFLNSLNTIGPTGWTPIAKALNEAKSSFDQLDAKGEKVVYLLTDGEET
CGGNPIKTAKELQKDNITVNVIGFDYKEGYKGQLNAIAKVGGGEYFPAYTQKDVEKIFTQQSLMLSK
>Mature_227_residues
MKKRFSLIMMTGLLFGLTSPAFAAEKTETEAKAPANVAVLLDASGSMAKRIDGVSKFNSAKKEISKFASSLPEGTQVKMS
VFGSEGNNKNSGKVQSCEAIRNVYGFQSFNEQSFLNSLNTIGPTGWTPIAKALNEAKSSFDQLDAKGEKVVYLLTDGEET
CGGNPIKTAKELQKDNITVNVIGFDYKEGYKGQLNAIAKVGGGEYFPAYTQKDVEKIFTQQSLMLSK

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ywmD

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YWMC_BACSU (P70960)

Other databases:

- EMBL:   Z81356
- EMBL:   AL009126
- PIR:   G70062
- RefSeq:   NP_391555.1
- ProteinModelPortal:   P70960
- SMR:   P70960
- EnsemblBacteria:   EBBACT00000003958
- GeneID:   936990
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU36740
- NMPDR:   fig|224308.1.peg.3681
- GenoList:   BSU36740
- GeneTree:   EBGT00050000000984
- HOGENOM:   HBG338404
- OMA:   FGSEGNN
- ProtClustDB:   CLSK888040
- BioCyc:   BSUB:BSU36740-MONOMER
- InterPro:   IPR002035
- SMART:   SM00327

Pfam domain/function: PF00092 VWA

EC number: NA

Molecular weight: Translated: 24542; Mature: 24542

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRFSLIMMTGLLFGLTSPAFAAEKTETEAKAPANVAVLLDASGSMAKRIDGVSKFNSA
CCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
KKEISKFASSLPEGTQVKMSVFGSEGNNKNSGKVQSCEAIRNVYGFQSFNEQSFLNSLNT
HHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHC
IGPTGWTPIAKALNEAKSSFDQLDAKGEKVVYLLTDGEETCGGNPIKTAKELQKDNITVN
CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCEEE
VIGFDYKEGYKGQLNAIAKVGGGEYFPAYTQKDVEKIFTQQSLMLSK
EEEECCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKRFSLIMMTGLLFGLTSPAFAAEKTETEAKAPANVAVLLDASGSMAKRIDGVSKFNSA
CCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
KKEISKFASSLPEGTQVKMSVFGSEGNNKNSGKVQSCEAIRNVYGFQSFNEQSFLNSLNT
HHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHC
IGPTGWTPIAKALNEAKSSFDQLDAKGEKVVYLLTDGEETCGGNPIKTAKELQKDNITVN
CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCEEE
VIGFDYKEGYKGQLNAIAKVGGGEYFPAYTQKDVEKIFTQQSLMLSK
EEEECCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377