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The map label for this gene is csbD

Identifier: 16080720

GI number: 16080720

Start: 3770104

End: 3770292

Strand: Reverse

Name: csbD

Synonym: BSU36670

Alternate gene names: 16080720

Gene position: 3770292-3770104 (Counterclockwise)

Preceding gene: 255767786

Following gene: 16080719

Centisome position: 89.44

GC content: 40.21

Gene sequence:

>189_bases
ATGGGTAACGATAGTGTAAAAGACAAAATGAAGGGCGGCTTCAATAAAGCCAAAGGAGAAGTGAAGGATAAAGTCGGAGA
TATGGCTGACAGAACGGACATGCAGGCTGAAGGCAAAAAAGATAAGGCAAAAGGCGAAATCCAAAAGGATATCGGGAAAG
CCAAGGATAAATTTTCAGATAAAGATTAA

Upstream 100 bases:

>100_bases
CGGAGAGCGCTACGAAATCGATAAATAACATTAGAATGTTTATTGCCTCTCAGATCGGGAAGTTAACAAGTACACACATA
ATTGAGAGGGGAGAATTAAC

Downstream 100 bases:

>100_bases
TCGTACGGAAGAGGCAGGAAACGAAATGTTTCTTGTCTTTTTTTTCGCTTTTTCTGATGTGAATAAATATAACAAAAAAA
GAAGCTGATTTGGTCAAGGT

Product: stress response protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 62; Mature: 61

Protein sequence:

>62_residues
MGNDSVKDKMKGGFNKAKGEVKDKVGDMADRTDMQAEGKKDKAKGEIQKDIGKAKDKFSDKD

Sequences:

>Translated_62_residues
MGNDSVKDKMKGGFNKAKGEVKDKVGDMADRTDMQAEGKKDKAKGEIQKDIGKAKDKFSDKD
>Mature_61_residues
GNDSVKDKMKGGFNKAKGEVKDKVGDMADRTDMQAEGKKDKAKGEIQKDIGKAKDKFSDKD

Specific function: Unknown

COG id: COG3237

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0337 (CsbD) family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CSBD_BACSU (P70964)

Other databases:

- EMBL:   Z81356
- EMBL:   AL009126
- PIR:   C70063
- RefSeq:   NP_391548.1
- ProteinModelPortal:   P70964
- SMR:   P70964
- EnsemblBacteria:   EBBACT00000001652
- GeneID:   936969
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU36670
- NMPDR:   fig|224308.1.peg.3674
- GenoList:   BSU36670
- GeneTree:   EBGT00050000001148
- HOGENOM:   HBG704474
- OMA:   KNEGKWE
- ProtClustDB:   CLSK888037
- BioCyc:   BSUB:BSU36670-MONOMER
- InterPro:   IPR008462
- Gene3D:   G3DSA:1.10.1470.10

Pfam domain/function: PF05532 CsbD; SSF69047 CsbD

EC number: NA

Molecular weight: Translated: 6793; Mature: 6662

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNDSVKDKMKGGFNKAKGEVKDKVGDMADRTDMQAEGKKDKAKGEIQKDIGKAKDKFSD
CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
KD
CC
>Mature Secondary Structure 
GNDSVKDKMKGGFNKAKGEVKDKVGDMADRTDMQAEGKKDKAKGEIQKDIGKAKDKFSD
CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
KD
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 10376822; 11988534