Click here to switch to the map view.

The map label for this gene is ywmF

Identifier: 255767786

GI number: 255767786

Start: 3770365

End: 3770865

Strand: Reverse

Name: ywmF

Synonym: BSU36680

Alternate gene names: 255767786

Gene position: 3770865-3770365 (Counterclockwise)

Preceding gene: 16080722

Following gene: 16080720

Centisome position: 89.45

GC content: 41.12

Gene sequence:

>501_bases
ATGCATGTGAGGGGGAATTCAATGTTTGGTTTTAATGATATGGTGAAGTTTCTGTGGTCTTTCCTCATTGTTCTGCCGCT
TGTACAGATTATACATGTTTCAGGGCACAGCTTTATGGCTTTTATTTTTGGCGGAAAGGGATCGTTGGATATAGGCATGG
GAAAAACGCTGCTTAAAATTGGACCCATACGGTTCAGAACGATTTATTTTATCGATTCTTTTTGCCGGTACGGGGAGTTG
AAAATTGACAATCGATTCTCAAATGCACTCGTGTATGCAGGGGGCTGCTTGTTTAACCTCATCACGATTTTTGCAATCAA
TCTGCTGATTATACACAGTGTATTAAAGCCGAATGTGTTTTTCTATCAGTTTGTCTATTTTTCTACGTATTATGTGTTTT
TTGCCCTGCTGCCGGTCCGATATTCGGAGAAAAAGTCATCAGACGGGCTGGCGATATACAAGGTGCTCCGTTACGGAGAG
CGCTACGAAATCGATAAATAA

Upstream 100 bases:

>100_bases
ATGCAAAAAAAGGGGAGCATCGGAACGTTTATTTCCGGGGAGAACAGGAAAAATCGCTACAGCACTGTTTTTTGAACAAA
AGCCGTTTTGGGATGCAGAT

Downstream 100 bases:

>100_bases
CATTAGAATGTTTATTGCCTCTCAGATCGGGAAGTTAACAAGTACACACATAATTGAGAGGGGAGAATTAACATGGGTAA
CGATAGTGTAAAAGACAAAA

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MHVRGNSMFGFNDMVKFLWSFLIVLPLVQIIHVSGHSFMAFIFGGKGSLDIGMGKTLLKIGPIRFRTIYFIDSFCRYGEL
KIDNRFSNALVYAGGCLFNLITIFAINLLIIHSVLKPNVFFYQFVYFSTYYVFFALLPVRYSEKKSSDGLAIYKVLRYGE
RYEIDK

Sequences:

>Translated_166_residues
MHVRGNSMFGFNDMVKFLWSFLIVLPLVQIIHVSGHSFMAFIFGGKGSLDIGMGKTLLKIGPIRFRTIYFIDSFCRYGEL
KIDNRFSNALVYAGGCLFNLITIFAINLLIIHSVLKPNVFFYQFVYFSTYYVFFALLPVRYSEKKSSDGLAIYKVLRYGE
RYEIDK
>Mature_166_residues
MHVRGNSMFGFNDMVKFLWSFLIVLPLVQIIHVSGHSFMAFIFGGKGSLDIGMGKTLLKIGPIRFRTIYFIDSFCRYGEL
KIDNRFSNALVYAGGCLFNLITIFAINLLIIHSVLKPNVFFYQFVYFSTYYVFFALLPVRYSEKKSSDGLAIYKVLRYGE
RYEIDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19213; Mature: 19213

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVRGNSMFGFNDMVKFLWSFLIVLPLVQIIHVSGHSFMAFIFGGKGSLDIGMGKTLLKI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEECCCCCHHHHC
GPIRFRTIYFIDSFCRYGELKIDNRFSNALVYAGGCLFNLITIFAINLLIIHSVLKPNVF
CCCHHHHHHHHHHHHHCCCEEECCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCHH
FYQFVYFSTYYVFFALLPVRYSEKKSSDGLAIYKVLRYGERYEIDK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MHVRGNSMFGFNDMVKFLWSFLIVLPLVQIIHVSGHSFMAFIFGGKGSLDIGMGKTLLKI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEECCCCCHHHHC
GPIRFRTIYFIDSFCRYGELKIDNRFSNALVYAGGCLFNLITIFAINLLIIHSVLKPNVF
CCCHHHHHHHHHHHHHCCCEEECCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCHH
FYQFVYFSTYYVFFALLPVRYSEKKSSDGLAIYKVLRYGERYEIDK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]