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The map label for this gene is ywnB

Identifier: 16080715

GI number: 16080715

Start: 3765469

End: 3766110

Strand: Reverse

Name: ywnB

Synonym: BSU36620

Alternate gene names: 16080715

Gene position: 3766110-3765469 (Counterclockwise)

Preceding gene: 16080716

Following gene: 16080713

Centisome position: 89.34

GC content: 45.79

Gene sequence:

>642_bases
ATGAAAATTGGTATTATAGGCGCAAGCGGGAAAGCGGGAAACGAGATTTTGAAAGAAGCGAAAAAAAGAGGCCATGAAGT
GACAGCCATCGTCAGAAACGCTTCAAAAGTGCAGGAGCAAGACGTAGCGATTTTGGAAAAAGATGTGTTTGAACTGACTG
CGGAAGACATCAAGCCTTTCGACGCGGTCGTAAACGCTTTTGGAGCAGCACCCGGCCAAGAACATCTTCATGTTGAAGCA
GGAAGAGCACTCATCAGCATTTTAAAGGACGCGAAGCACACAAGATTGCTTGTTGTTGGCGGAGCGGGAAGCCTGTTTGT
TGATGAAGCCAAAACAACCCGTTTAATGGATACGCCGGAATTTCCGAAAGAATATTTGCCAACTGCATCAAATCAAGGCG
AGAACCTGAAAGATTTGCAGCAGACAGACTCCATTTCCTGGACGTTCCTCAGTCCTGCGGCATTTTTTGATCCAGCAGGA
AAACGGACTGGCTCTTACCAAAAAGGAAAAGACAATGTCATCGTAAATGCAAAAGGAGACAGCTATATCAGCTATGCAGA
TTATGCCATTGCCGTGTTGGACGAGCTTGAACATCCCGAACACAAAAATGAACGCTTCACAGTGGTAAGCGAAGCGGAAT
AA

Upstream 100 bases:

>100_bases
TCATTAAAAGATGTTATGAATCATCTCTTTTAATCAAAAGGGATGACTTCTCACCGCTAACATGTAACTAAAATTGTTAC
AAATAAGGAGGAAATGAAAA

Downstream 100 bases:

>100_bases
TAAAAAACCCGGAGCCAGCTCCGGGTTTTTCTCATTAATAAGTGCTGTACGTATCGCTGAAAAGGCCGTCAGCAATCCCA
AGCATTAAAAAGATGAAGAA

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MKIGIIGASGKAGNEILKEAKKRGHEVTAIVRNASKVQEQDVAILEKDVFELTAEDIKPFDAVVNAFGAAPGQEHLHVEA
GRALISILKDAKHTRLLVVGGAGSLFVDEAKTTRLMDTPEFPKEYLPTASNQGENLKDLQQTDSISWTFLSPAAFFDPAG
KRTGSYQKGKDNVIVNAKGDSYISYADYAIAVLDELEHPEHKNERFTVVSEAE

Sequences:

>Translated_213_residues
MKIGIIGASGKAGNEILKEAKKRGHEVTAIVRNASKVQEQDVAILEKDVFELTAEDIKPFDAVVNAFGAAPGQEHLHVEA
GRALISILKDAKHTRLLVVGGAGSLFVDEAKTTRLMDTPEFPKEYLPTASNQGENLKDLQQTDSISWTFLSPAAFFDPAG
KRTGSYQKGKDNVIVNAKGDSYISYADYAIAVLDELEHPEHKNERFTVVSEAE
>Mature_213_residues
MKIGIIGASGKAGNEILKEAKKRGHEVTAIVRNASKVQEQDVAILEKDVFELTAEDIKPFDAVVNAFGAAPGQEHLHVEA
GRALISILKDAKHTRLLVVGGAGSLFVDEAKTTRLMDTPEFPKEYLPTASNQGENLKDLQQTDSISWTFLSPAAFFDPAG
KRTGSYQKGKDNVIVNAKGDSYISYADYAIAVLDELEHPEHKNERFTVVSEAE

Specific function: Unknown

COG id: COG2910

COG function: function code R; Putative NADH-flavin reductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YWNB_BACSU (P71037)

Other databases:

- EMBL:   Y08559
- EMBL:   AL009126
- PIR:   E70063
- RefSeq:   NP_391543.1
- ProteinModelPortal:   P71037
- SMR:   P71037
- EnsemblBacteria:   EBBACT00000000197
- GeneID:   936961
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU36620
- NMPDR:   fig|224308.1.peg.3669
- GenoList:   BSU36620
- GeneTree:   EBGT00050000001010
- HOGENOM:   HBG734645
- OMA:   GEEHLHV
- ProtClustDB:   CLSK2518284
- BioCyc:   BSUB:BSU36620-MONOMER
- GO:   GO:0005488
- InterPro:   IPR016040
- InterPro:   IPR008030
- Gene3D:   G3DSA:3.40.50.720

Pfam domain/function: PF05368 NmrA

EC number: NA

Molecular weight: Translated: 23196; Mature: 23196

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGIIGASGKAGNEILKEAKKRGHEVTAIVRNASKVQEQDVAILEKDVFELTAEDIKPF
CEEEEEECCCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
DAVVNAFGAAPGQEHLHVEAGRALISILKDAKHTRLLVVGGAGSLFVDEAKTTRLMDTPE
HHHHHHHCCCCCCCCEEHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCHHCCCCCCC
FPKEYLPTASNQGENLKDLQQTDSISWTFLSPAAFFDPAGKRTGSYQKGKDNVIVNAKGD
CCHHHCCCCCCCCCCHHHHHHHCCCEEEEECCHHHCCCCCCCCCCCCCCCCCEEEEECCC
SYISYADYAIAVLDELEHPEHKNERFTVVSEAE
CEEEHHHHHHHHHHHHCCCCCCCCEEEEEECCC
>Mature Secondary Structure
MKIGIIGASGKAGNEILKEAKKRGHEVTAIVRNASKVQEQDVAILEKDVFELTAEDIKPF
CEEEEEECCCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
DAVVNAFGAAPGQEHLHVEAGRALISILKDAKHTRLLVVGGAGSLFVDEAKTTRLMDTPE
HHHHHHHCCCCCCCCEEHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCHHCCCCCCC
FPKEYLPTASNQGENLKDLQQTDSISWTFLSPAAFFDPAGKRTGSYQKGKDNVIVNAKGD
CCHHHCCCCCCCCCCHHHHHHHCCCEEEEECCHHHCCCCCCCCCCCCCCCCCEEEEECCC
SYISYADYAIAVLDELEHPEHKNERFTVVSEAE
CEEEHHHHHHHHHHHHCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9150240; 9384377