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The map label for this gene is ywnC

Identifier: 16080714

GI number: 16080714

Start: 3765051

End: 3765434

Strand: Direct

Name: ywnC

Synonym: BSU36610

Alternate gene names: 16080714

Gene position: 3765051-3765434 (Clockwise)

Preceding gene: 16080712

Following gene: 16080732

Centisome position: 89.31

GC content: 42.19

Gene sequence:

>384_bases
ATGAATCCTGAAACAATGAACAAAACCCTCATCAGCATTTCGAAATGGGGAAAAGCTACAGGCATTTTATTTATTATTAT
GGGCGCAATTACCGCGCTTTCAGGCGCGTTCTTTTTTCTAATCGGTGCCGTGCCAGGCGTACTGCAAATTATTTCCGGTA
TCTTTTTGATGAGGTCAGCTAGGGAAGCAGGCCAAATGGCTGAACACAATAGCGGACAGTCTGAAGACTTAATGCTGGAG
AATTACGCGAAATTCGTAAAGATGCAAGGGATTTATTTGATCGTAAGCATTGCTGTATCCATTCTTGCGATTATCGCCTT
CTTCATCTTTTTAATGCTTGGGATTGCTGACGGCCTTTTCAGCGATACGTACAGCACTTATTAA

Upstream 100 bases:

>100_bases
AGGGTCAATCCCCAAAATGTTATTTTCTATATACAAAACTTCTCACAAATAGTGTATAAAAGAAAAGTGAGTATTTTTTT
GTAAAGGGGAGCCAGTATAC

Downstream 100 bases:

>100_bases
TGAGAAAAACCCGGAGCTGGCTCCGGGTTTTTTATTATTCCGCTTCGCTTACCACTGTGAAGCGTTCATTTTTGTGTTCG
GGATGTTCAAGCTCGTCCAA

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MNPETMNKTLISISKWGKATGILFIIMGAITALSGAFFFLIGAVPGVLQIISGIFLMRSAREAGQMAEHNSGQSEDLMLE
NYAKFVKMQGIYLIVSIAVSILAIIAFFIFLMLGIADGLFSDTYSTY

Sequences:

>Translated_127_residues
MNPETMNKTLISISKWGKATGILFIIMGAITALSGAFFFLIGAVPGVLQIISGIFLMRSAREAGQMAEHNSGQSEDLMLE
NYAKFVKMQGIYLIVSIAVSILAIIAFFIFLMLGIADGLFSDTYSTY
>Mature_127_residues
MNPETMNKTLISISKWGKATGILFIIMGAITALSGAFFFLIGAVPGVLQIISGIFLMRSAREAGQMAEHNSGQSEDLMLE
NYAKFVKMQGIYLIVSIAVSILAIIAFFIFLMLGIADGLFSDTYSTY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YWNC_BACSU (P71038)

Other databases:

- EMBL:   Y08559
- EMBL:   AL009126
- PIR:   F70063
- RefSeq:   NP_391542.1
- ProteinModelPortal:   P71038
- EnsemblBacteria:   EBBACT00000002881
- GeneID:   936950
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU36610
- NMPDR:   fig|224308.1.peg.3668
- GenoList:   BSU36610
- GeneTree:   EBGT00050000002032
- HOGENOM:   HBG338401
- OMA:   ISISKWG
- ProtClustDB:   CLSK888032
- BioCyc:   BSUB:BSU36610-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13800; Mature: 13800

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x12e4994c)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPETMNKTLISISKWGKATGILFIIMGAITALSGAFFFLIGAVPGVLQIISGIFLMRSA
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REAGQMAEHNSGQSEDLMLENYAKFVKMQGIYLIVSIAVSILAIIAFFIFLMLGIADGLF
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SDTYSTY
HCCCCCH
>Mature Secondary Structure
MNPETMNKTLISISKWGKATGILFIIMGAITALSGAFFFLIGAVPGVLQIISGIFLMRSA
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REAGQMAEHNSGQSEDLMLENYAKFVKMQGIYLIVSIAVSILAIIAFFIFLMLGIADGLF
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SDTYSTY
HCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9150240; 9384377