Click here to switch to the map view.

The map label for this gene is ywnF

Identifier: 16080711

GI number: 16080711

Start: 3761987

End: 3762421

Strand: Reverse

Name: ywnF

Synonym: BSU36580

Alternate gene names: 16080711

Gene position: 3762421-3761987 (Counterclockwise)

Preceding gene: 16080713

Following gene: 16080708

Centisome position: 89.25

GC content: 41.84

Gene sequence:

>435_bases
ATGAACTTTTACAGAGTCGAACAAATGCCGGGGTTCATCAAAACAGAAATGCAAAAAATTCAAAAGGCCGTACAGCCTTT
CATGAAAAAAACCGTCATTTACCGTTTTCTTGCTATTCCGCTTGCTGCATTCTCTCTCTTTAATTTAGCTGCTTTTCTAT
TTCATGCTTCAGCTGACAGGGAGTCCCTGATCAGCGCAGGCATATTCGCCCTTTTGGCGGCGCTCGGGCTCGCATTTTTT
AAAGAGGCAGGCTATCAGCATAAACAAATCCAAAAAACGGTTCACATCTATATGCTGAACAGGATCAAAAAGAGCGAAAT
CCTTTCAGAAGAGCGGAAAAGCTCCTACGCACGACAAATAAAGGAAGAGCCTTTTGCGATGCGGAGTTTTGTTGAATTTT
TGACTGAGGAAGACAGACGCAAAAAAATGTATTAA

Upstream 100 bases:

>100_bases
ACGGGCAGATTTCTTTAAAACCAGCTTGCACCTGCGTTAAAATAAACACATATGATAACGTTCGTGAAGCTTGAAACATC
AAATAAAGGGGGAGGATTAT

Downstream 100 bases:

>100_bases
AGAAGATCTGCACCCGGATTGTTGAGATTTTCCAGACGATCCGGGTGTGTTTTTTTGCATGCAGACACCCGAAATAAAAA
GTGCGGTTTCGGATTGATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MNFYRVEQMPGFIKTEMQKIQKAVQPFMKKTVIYRFLAIPLAAFSLFNLAAFLFHASADRESLISAGIFALLAALGLAFF
KEAGYQHKQIQKTVHIYMLNRIKKSEILSEERKSSYARQIKEEPFAMRSFVEFLTEEDRRKKMY

Sequences:

>Translated_144_residues
MNFYRVEQMPGFIKTEMQKIQKAVQPFMKKTVIYRFLAIPLAAFSLFNLAAFLFHASADRESLISAGIFALLAALGLAFF
KEAGYQHKQIQKTVHIYMLNRIKKSEILSEERKSSYARQIKEEPFAMRSFVEFLTEEDRRKKMY
>Mature_144_residues
MNFYRVEQMPGFIKTEMQKIQKAVQPFMKKTVIYRFLAIPLAAFSLFNLAAFLFHASADRESLISAGIFALLAALGLAFF
KEAGYQHKQIQKTVHIYMLNRIKKSEILSEERKSSYARQIKEEPFAMRSFVEFLTEEDRRKKMY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YWNF_BACSU (P71041)

Other databases:

- EMBL:   Y08559
- EMBL:   AL009126
- PIR:   H70063
- RefSeq:   NP_391539.1
- ProteinModelPortal:   P71041
- EnsemblBacteria:   EBBACT00000000436
- GeneID:   936942
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU36580
- NMPDR:   fig|224308.1.peg.3665
- GenoList:   BSU36580
- GeneTree:   EBGT00050000001258
- HOGENOM:   HBG338402
- OMA:   SEERKSA
- ProtClustDB:   CLSK873161
- BioCyc:   BSUB:BSU36580-MONOMER
- InterPro:   IPR020205
- ProDom:   PD087515

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16888; Mature: 16888

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x12e9b154)-; HASH(0x12df4704)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFYRVEQMPGFIKTEMQKIQKAVQPFMKKTVIYRFLAIPLAAFSLFNLAAFLFHASADR
CCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
ESLISAGIFALLAALGLAFFKEAGYQHKQIQKTVHIYMLNRIKKSEILSEERKSSYARQI
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEEPFAMRSFVEFLTEEDRRKKMY
HHCHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MNFYRVEQMPGFIKTEMQKIQKAVQPFMKKTVIYRFLAIPLAAFSLFNLAAFLFHASADR
CCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
ESLISAGIFALLAALGLAFFKEAGYQHKQIQKTVHIYMLNRIKKSEILSEERKSSYARQI
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEEPFAMRSFVEFLTEEDRRKKMY
HHCHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9150240; 9384377