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The map label for this gene is comFC

Identifier: 16080598

GI number: 16080598

Start: 3641125

End: 3641814

Strand: Reverse

Name: comFC

Synonym: BSU35450

Alternate gene names: 16080598

Gene position: 3641814-3641125 (Counterclockwise)

Preceding gene: 16080599

Following gene: 16080597

Centisome position: 86.39

GC content: 40.43

Gene sequence:

>690_bases
CTGATCTGTTTATTATGTGATTCGCAATTTTCTCAAGATGTTACATGGAGAGCCCTTTTTTTACTAAAGCCTGATGAAAA
GGTTTGTTATTCTTGCAGAAGCAAATTAAAGAAAATCACAGGACATATCTGCCCCCTGTGCGGCAGACCTCAATCTGTTC
ATGCCGTATGCAGGGATTGCGAGGTGTGGAGAACAAGGATCAGAGACAGTTTGCTATTGCGTCAAAACCGTTCAGTTTAC
ACATATAATGATATGATGAAAGAAACGCTCTCCCGTTTTAAATTTAGAGGAGATGCAGAAATCATAAATGCATTTAAAAG
TGATTTTTCTTCAACCTTTTCTAAGGTTTACCCCGATAAGCATTTTGTTCTTGTACCTATTCCGCTGAGCAAGGAACGGG
AAGAAGAGCGCGGATTTAACCAGGCACATCTCTTGGCAGAATGTTTAGACCGGCCTTCCCACCATCCCCTCATTCGCCTG
AATAATGAGAAACAGTCAAAGAAAAAGAAAACAGAACGCCTGCTGTCAGAGTGCATTTTTGATACAAAAAATAATTCAGC
AGAAGGTATGAATATCATTTTAATAGACGATCTTTATACAACAGGCGCCACCTTGCACTTCGCAGCCCGCTGCTTATTAG
AAAAAGGAAAAGCCGCTTCAGTGTCATCTTTTACCTTGATCAGAAGCTAA

Upstream 100 bases:

>100_bases
AAAACACAGCAATGCTTGTCATTTTGGCTGAATCTGCTGCAGTAGTTTCAGAGAGTCCAAGCGATTTATGTCAAACGAAG
CAGGAGGAGGCATTCATAAA

Downstream 100 bases:

>100_bases
ATGATTCTGTTTTTATGCCGATATAATCACTAGAAATTGACACAGGCATATTATCTAATAAGGAGAAAAAAAGATGGGAG
AACTGGCTAATTGTCCGAAA

Product: component of the DNA transport apparatus

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MICLLCDSQFSQDVTWRALFLLKPDEKVCYSCRSKLKKITGHICPLCGRPQSVHAVCRDCEVWRTRIRDSLLLRQNRSVY
TYNDMMKETLSRFKFRGDAEIINAFKSDFSSTFSKVYPDKHFVLVPIPLSKEREEERGFNQAHLLAECLDRPSHHPLIRL
NNEKQSKKKKTERLLSECIFDTKNNSAEGMNIILIDDLYTTGATLHFAARCLLEKGKAASVSSFTLIRS

Sequences:

>Translated_229_residues
MICLLCDSQFSQDVTWRALFLLKPDEKVCYSCRSKLKKITGHICPLCGRPQSVHAVCRDCEVWRTRIRDSLLLRQNRSVY
TYNDMMKETLSRFKFRGDAEIINAFKSDFSSTFSKVYPDKHFVLVPIPLSKEREEERGFNQAHLLAECLDRPSHHPLIRL
NNEKQSKKKKTERLLSECIFDTKNNSAEGMNIILIDDLYTTGATLHFAARCLLEKGKAASVSSFTLIRS
>Mature_229_residues
MICLLCDSQFSQDVTWRALFLLKPDEKVCYSCRSKLKKITGHICPLCGRPQSVHAVCRDCEVWRTRIRDSLLLRQNRSVY
TYNDMMKETLSRFKFRGDAEIINAFKSDFSSTFSKVYPDKHFVLVPIPLSKEREEERGFNQAHLLAECLDRPSHHPLIRL
NNEKQSKKKKTERLLSECIFDTKNNSAEGMNIILIDDLYTTGATLHFAARCLLEKGKAASVSSFTLIRS

Specific function: Involved in transformation (competence for DNA uptake)

COG id: COG1040

COG function: function code R; Predicted amidophosphoribosyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ComF/GntX family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): COMFC_BACSU (P39147)

Other databases:

- EMBL:   Z18629
- EMBL:   L14437
- EMBL:   U56901
- EMBL:   AL009126
- PIR:   S77621
- RefSeq:   NP_391425.1
- ProteinModelPortal:   P39147
- SMR:   P39147
- EnsemblBacteria:   EBBACT00000003351
- GeneID:   936747
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU35450
- NMPDR:   fig|224308.1.peg.3551
- GenoList:   BSU35450
- GeneTree:   EBGT00050000001624
- HOGENOM:   HBG695777
- OMA:   AMKDYFS
- ProtClustDB:   CLSK887958
- BioCyc:   BSUB:BSU35450-MONOMER
- InterPro:   IPR005222
- InterPro:   IPR000836
- TIGRFAMs:   TIGR00201

Pfam domain/function: PF00156 Pribosyltran

EC number: NA

Molecular weight: Translated: 26414; Mature: 26414

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MICLLCDSQFSQDVTWRALFLLKPDEKVCYSCRSKLKKITGHICPLCGRPQSVHAVCRDC
CEEEEECCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
EVWRTRIRDSLLLRQNRSVYTYNDMMKETLSRFKFRGDAEIINAFKSDFSSTFSKVYPDK
HHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC
HFVLVPIPLSKEREEERGFNQAHLLAECLDRPSHHPLIRLNNEKQSKKKKTERLLSECIF
CEEEEECCCCCCHHHHCCCCHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHH
DTKNNSAEGMNIILIDDLYTTGATLHFAARCLLEKGKAASVSSFTLIRS
CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHEEEECC
>Mature Secondary Structure
MICLLCDSQFSQDVTWRALFLLKPDEKVCYSCRSKLKKITGHICPLCGRPQSVHAVCRDC
CEEEEECCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
EVWRTRIRDSLLLRQNRSVYTYNDMMKETLSRFKFRGDAEIINAFKSDFSSTFSKVYPDK
HHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC
HFVLVPIPLSKEREEERGFNQAHLLAECLDRPSHHPLIRLNNEKQSKKKKTERLLSECIF
CEEEEECCCCCCHHHHCCCCHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHH
DTKNNSAEGMNIILIDDLYTTGATLHFAARCLLEKGKAASVSSFTLIRS
CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8412657; 8045879; 9384377