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The map label for this gene is yvyF

Identifier: 16080597

GI number: 16080597

Start: 3640632

End: 3641051

Strand: Reverse

Name: yvyF

Synonym: BSU35440

Alternate gene names: 16080597

Gene position: 3641051-3640632 (Counterclockwise)

Preceding gene: 16080598

Following gene: 16080596

Centisome position: 86.37

GC content: 38.57

Gene sequence:

>420_bases
ATGGGAGAACTGGCTAATTGTCCGAAATGCAATGCTTTATTTTTAAAAACAAAGCTGCAAACCGTATGTCAGGCGTGTAT
TAAGGAAGAAGAAAAATCATTTGAGACTGTCTATAAATTTTTAAGAAAACAGGAAAACCGGCAATCAACTTTGAGCCGGA
TAACTGAGGAAACAGGTGTGGAAGAAGAGCTGATATTGAAATTCATCAGGCAGAAGCGAATTCAGATCACTCATCTTCCT
AATTTGGCATACCCTTGTGAAAGGTGCGGGACATCGATTAGAGAAGGCAAGTTCTGCAAGGCTTGCCAGTCTGATATTAA
GGATCAAATGGATCATTTGAACCACGAGGATGCTCTGAAAATCGAGAAAGAAAATAGTAAAAAAGACACATACTATGCCT
ATAATACCAAAAACAGCTGA

Upstream 100 bases:

>100_bases
TCATCTTTTACCTTGATCAGAAGCTAAATGATTCTGTTTTTATGCCGATATAATCACTAGAAATTGACACAGGCATATTA
TCTAATAAGGAGAAAAAAAG

Downstream 100 bases:

>100_bases
TTCCCTAAACTAACTGAAAACGCAGTCGATAAAAGGGTTAAGATTGTTTAAAGACTGCAACGGAAAGCGAGAGGAATCCT
ATGAAAATCAATCAATTTGG

Product: regulator of flagella formation

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MGELANCPKCNALFLKTKLQTVCQACIKEEEKSFETVYKFLRKQENRQSTLSRITEETGVEEELILKFIRQKRIQITHLP
NLAYPCERCGTSIREGKFCKACQSDIKDQMDHLNHEDALKIEKENSKKDTYYAYNTKNS

Sequences:

>Translated_139_residues
MGELANCPKCNALFLKTKLQTVCQACIKEEEKSFETVYKFLRKQENRQSTLSRITEETGVEEELILKFIRQKRIQITHLP
NLAYPCERCGTSIREGKFCKACQSDIKDQMDHLNHEDALKIEKENSKKDTYYAYNTKNS
>Mature_138_residues
GELANCPKCNALFLKTKLQTVCQACIKEEEKSFETVYKFLRKQENRQSTLSRITEETGVEEELILKFIRQKRIQITHLPN
LAYPCERCGTSIREGKFCKACQSDIKDQMDHLNHEDALKIEKENSKKDTYYAYNTKNS

Specific function: May be involved in the assembly, structure, or function of the flagellum. May polymerize to form a filamentous structure that is part of the flagellum

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To S.typhimurium fliF

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YVYF_BACSU (P39807)

Other databases:

- EMBL:   L14437
- EMBL:   U56901
- EMBL:   AL009126
- PIR:   B70049
- RefSeq:   NP_391424.1
- EnsemblBacteria:   EBBACT00000000010
- GeneID:   936743
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU35440
- NMPDR:   fig|224308.1.peg.3550
- GenoList:   BSU35440
- GeneTree:   EBGT00050000001444
- HOGENOM:   HBG313873
- OMA:   YPCERCG
- ProtClustDB:   CLSK887957
- BioCyc:   BSUB:BSU35440-MONOMER
- InterPro:   IPR022258
- TIGRFAMs:   TIGR03826

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16232; Mature: 16101

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
5.8 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGELANCPKCNALFLKTKLQTVCQACIKEEEKSFETVYKFLRKQENRQSTLSRITEETGV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EEELILKFIRQKRIQITHLPNLAYPCERCGTSIREGKFCKACQSDIKDQMDHLNHEDALK
CHHHHHHHHHHHCCHHHCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHE
IEKENSKKDTYYAYNTKNS
ECCCCCCCCCEEEECCCCC
>Mature Secondary Structure 
GELANCPKCNALFLKTKLQTVCQACIKEEEKSFETVYKFLRKQENRQSTLSRITEETGV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EEELILKFIRQKRIQITHLPNLAYPCERCGTSIREGKFCKACQSDIKDQMDHLNHEDALK
CHHHHHHHHHHHCCHHHCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHE
IEKENSKKDTYYAYNTKNS
ECCCCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8045879; 9384377