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The map label for this gene is flgM

Identifier: 16080596

GI number: 16080596

Start: 3640285

End: 3640551

Strand: Reverse

Name: flgM

Synonym: BSU35430

Alternate gene names: 16080596

Gene position: 3640551-3640285 (Counterclockwise)

Preceding gene: 16080597

Following gene: 16080595

Centisome position: 86.36

GC content: 33.71

Gene sequence:

>267_bases
ATGAAAATCAATCAATTTGGAACACAATCCGTTAATCCATATCAAAAAAATTATGATAAGCAAGCGGTGCAAAAAACTGT
TGCACAACCTCAAGATAAAATTGAAATTTCATCACAGGCTAAAGAAATGCAACATGCATCCGACGCAGTCACTGGTTCAC
GACAGGAAAAAATTGCGCAGCTTAAAGCGCAAATTGAAAACGGGTCATACAAAGTAGACGCAAATCATATTGCGAAAAAT
ATGATTAATTTTTATAAAAAGCAATAA

Upstream 100 bases:

>100_bases
ATAATACCAAAAACAGCTGATTCCCTAAACTAACTGAAAACGCAGTCGATAAAAGGGTTAAGATTGTTTAAAGACTGCAA
CGGAAAGCGAGAGGAATCCT

Downstream 100 bases:

>100_bases
AAAAGGAGAAAGCCCATGTCAGCGAAGGCAATTATTGAACAATTGAAGCGACTTTGCGTTCTGCATGAGCACCTGCTCAC
GCTGTCTGAAGAAAAGACGG

Product: anti-sigma factor repressor of sigma(D)-dependent transcription

Products: NA

Alternate protein names: Anti-sigma-D factor

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MKINQFGTQSVNPYQKNYDKQAVQKTVAQPQDKIEISSQAKEMQHASDAVTGSRQEKIAQLKAQIENGSYKVDANHIAKN
MINFYKKQ

Sequences:

>Translated_88_residues
MKINQFGTQSVNPYQKNYDKQAVQKTVAQPQDKIEISSQAKEMQHASDAVTGSRQEKIAQLKAQIENGSYKVDANHIAKN
MINFYKKQ
>Mature_88_residues
MKINQFGTQSVNPYQKNYDKQAVQKTVAQPQDKIEISSQAKEMQHASDAVTGSRQEKIAQLKAQIENGSYKVDANHIAKN
MINFYKKQ

Specific function: Allows the coupling of early and late flagellar synthesis through the repression of RNA polymerase sigma-D factor- dependent transcription

COG id: COG2747

COG function: function code KNU; Negative regulator of flagellin synthesis (anti-sigma28 factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgM family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FLGM_BACSU (P39809)

Other databases:

- EMBL:   L14437
- EMBL:   U56901
- EMBL:   AL009126
- PIR:   B69623
- RefSeq:   NP_391423.1
- ProteinModelPortal:   P39809
- SMR:   P39809
- EnsemblBacteria:   EBBACT00000002086
- GeneID:   936739
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU35430
- NMPDR:   fig|224308.1.peg.3549
- GenoList:   BSU35430
- GeneTree:   EBGT00050000002928
- HOGENOM:   HBG457857
- OMA:   KIHHIGP
- ProtClustDB:   CLSK873659
- BioCyc:   BSUB:BSU35430-MONOMER
- GO:   GO:0019861
- GO:   GO:0006350
- InterPro:   IPR007412
- TIGRFAMs:   TIGR03824

Pfam domain/function: PF04316 FlgM

EC number: NA

Molecular weight: Translated: 10000; Mature: 10000

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINQFGTQSVNPYQKNYDKQAVQKTVAQPQDKIEISSQAKEMQHASDAVTGSRQEKIAQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LKAQIENGSYKVDANHIAKNMINFYKKQ
HHHHHCCCCEEECHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKINQFGTQSVNPYQKNYDKQAVQKTVAQPQDKIEISSQAKEMQHASDAVTGSRQEKIAQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LKAQIENGSYKVDANHIAKNMINFYKKQ
HHHHHCCCCEEECHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8045879; 9384377