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The map label for this gene is prfB

Identifier: 16080582

GI number: 16080582

Start: 3627139

End: 3628167

Strand: Direct

Name: prfB

Synonym: BSU35290

Alternate gene names: NA

Gene position: 3627139-3628167 (Clockwise)

Preceding gene: 16080574

Following gene: 16080604

Centisome position: 86.04

GC content: 44.8

Gene sequence:

>1102_bases
ATGGAATTATCAGAAATTAGAGCAGAGCTCGAAAATATGGCTTCTCGTTTAGCGGACTTTAGGGGGTCTCTTTGACCTCG
AATCAAAGGAGGCCCGCATTGCTGAGCTAGATGAACAAATGGCTGATCCGGAATTCTGGAATGATCAGCAAAAAGCTCAA
ACGGTTATAAATGAAGCAAACGGTTTAAAGGATTATGTCAATTCGTATAAAAAATTGAATGAATCCCACGAAGAATTACA
AATGACTCATGATCTTTTGAAAGAAGAGCCGGACACTGATCTCCAGCTTGAGCTTGAAAAAGAACTAAAGTCATTAACAA
AAGAGTTCAATGAGTTTGAGCTTCAGCTTCTTCTCAGCGAGCCGTATGATAAAAATAACGCGATTTTAGAACTGCACCCT
GGTGCTGGCGGTACAGAGTCACAGGACTGGGGCTCTATGCTTCTTAGAATGTATACAAGATGGGGAGAGCGCCGCGGCTT
TAAAGTAGAGACTCTCGATTACCTTCCAGGTGACGAGGCGGGAATCAAGTCAGTGACATTGCTCATCAAAGGACACAACG
CTTACGGGTATCTCAAAGCAGAAAAAGGTGTTCATCGTCTTGTGCGGATCTCACCATTTGATTCATCAGGCCGCCGCCAC
ACATCTTTCGTTTCATGTGAAGTCATGCCTGAATTTAACGATGAAATTGATATTGATATTCGTACGGAGGATATTAAAGT
TGACACGTACCGTGCAAGCGGCGCGGGCGGACAGCACGTCAATACGACGGATTCAGCCGTTCGGATTACTCACTTGCCGA
CGAACGTAGTTGTGACATGCCAAACGGAGCGCTCACAAATTAAAAACCGTGAAAGAGCCATGAAAATGCTGAAGGCCAAG
CTGTATCAGCGCAGAATTGAAGAGCAGCAGGCAGAGCTGGATGAAATTCGCGGTGAACAAAAAGAAATCGGCTGGGGCAG
CCAAATCCGTTCTTATGTATTCCATCCGTATTCCATGGTAAAAGACCATCGGACCAATACAGAAATGGGGAACGTTCAAG
CTGTAATGGATGGTGACATTGATACGTTTATTGATGCCTACCTGCGTTCTAAGCTTTCATAA

Upstream 100 bases:

>100_bases
ATATAAAAATTGCTGCGGCCGTACTGAATAGTTCGCCCCGGCAAGTTTACTGACCGCGGCGCCTGCAGGCGCCTGCGGAT
CTTTTAATGAGGTGAATGAA

Downstream 100 bases:

>100_bases
GCTGAAAAACACACCTGATGCATACGGGTGTGTTTTTTTATTTCTTATATCCTTGATTTCACTGCTGCTTTAGCATATTA
CCACTGTATTTGGGTGTTAT

Product: peptide chain release factor 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>366_residues
MELSEIRAELENMASRLADFRGSLDLESKEARIAELDEQMADPEFWNDQQKAQTVINEANGLKDYVNSYKKLNESHEELQ
MTHDLLKEEPDTDLQLELEKELKSLTKEFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWGERRGF
KVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVMPEFNDEIDIDIRTEDIKV
DTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQIKNRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGS
QIRSYVFHPYSMVKDHRTNTEMGNVQAVMDGDIDTFIDAYLRSKLS

Sequences:

>Translated_343_residues
L*KLRTQVGINKRINVTIHYSLNVPHFCIGPMVFYHGIRMEYIRTDLAAPADFFLFTANFIQLCLLLFNSALIQLGLQHF
HGSFTVFNL*ALRLACHNYVRRQVSNPNG*IRRIDVLSARAACTVRVNFNILRTNININFIVKFRHDFT*NERCVAAA**
IKW*DPHKTMNTFFCFEIPVSVVSFDEQCH*LDSRLVTWKVIESLYFKAAALSPSCIHSKKHRAPVL*LCTASTRVQF*N
RVIFIIRLAEKKLKLKLIELFC**L*FFFKLKLEISVRLFFQKIMSHL*FFVGFIQFFIRIDIIL*TVCFIYNRLSFLLI
IPEFRISHLFI*LSNAGLL*FEV
>Mature_343_residues
L*KLRTQVGINKRINVTIHYSLNVPHFCIGPMVFYHGIRMEYIRTDLAAPADFFLFTANFIQLCLLLFNSALIQLGLQHF
HGSFTVFNL*ALRLACHNYVRRQVSNPNG*IRRIDVLSARAACTVRVNFNILRTNININFIVKFRHDFT*NERCVAAA**
IKW*DPHKTMNTFFCFEIPVSVVSFDEQCH*LDSRLVTWKVIESLYFKAAALSPSCIHSKKHRAPVL*LCTASTRVQF*N
RVIFIIRLAEKKLKLKLIELFC**L*FFFKLKLEISVRLFFQKIMSHL*FFVGFIQFFIRIDIIL*TVCFIYNRLSFLLI
IPEFRISHLFI*LSNAGLL*FEV

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37729; Mature: 37729

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
LKLRTQVGINKRINVTIHYSLNVPHFCIGPMVFYHGIRMEYIRTDLAAPADFFLFTANFI
CCEECCCCCCEEEEEEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHH
QLCLLLFNSALIQLGLQHFHGSFTVFNLALRLACHNYVRRQVSNPNGIRRIDVLSARAAC
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEE
TVRVNFNILRTNININFIVKFRHDFTNERCVAAAIKWDPHKTMNTFFCFEIPVSVVSFDE
EEEEEEEEEEEEEEEEEEEEEECCCCCCCEEEEEEEECCCCCCCEEEEEEECEEEECCCH
QCHLDSRLVTWKVIESLYFKAAALSPSCIHSKKHRAPVLLCTASTRVQFNRVIFIIRLAE
HCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEEECCCCEEEEEEEEEEEECC
KKLKLKLIELFCLFFFKLKLEISVRLFFQKIMSHLFFVGFIQFFIRIDIILTVCFIYNRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SFLLIIPEFRISHLFILSNAGLLFEV
EEEEEECCHHHEEEEEEECCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA