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The map label for this gene is yvfV

Identifier: 16080458

GI number: 16080458

Start: 3494985

End: 3495701

Strand: Reverse

Name: yvfV

Synonym: BSU34050

Alternate gene names: 16080458

Gene position: 3495701-3494985 (Counterclockwise)

Preceding gene: 16080459

Following gene: 16080457

Centisome position: 82.92

GC content: 49.37

Gene sequence:

>717_bases
ATGAAAGTCTCACTTTTTGTCACTTGTCTTGTTGATATGTTTCAAACAAATGTCGGAAAAGCAACGGTTGAGCTGCTGGA
GCGGCTTGGGTGCGAGGTTGATTTTCCAGAAGGGCAGATTTGCTGCGGACAGCCGGCTTACAACAGCGGCTATGTACATG
ACGCCAAAAAAGCAATGAAACGGATGATCGAAACGTTTCAGGATTCCGAATATGTTGTCAGTCCTTCGGGTTCCTGCACA
ACGATGTTCCGGGAGTATCCGCACCTGTTTCAGGATGATCCGAAATGGGCCGATAAAGCGAAAAAGCTGGCGGATAAAAC
GTATGAACTGACAGATTTTATTGTGAACGTCCTTGGGGTAGAGGATGTCGGCGCGACCCTTCATACAAAAGCGACCTTAC
ATACGTCGTGCCATATGACTAGGCTGCTGGGTGTTCGGAAGGAGCCGATGAAGCTGTTGAGCCATGTGAAGGGCCTGCAG
TTTACAGAGCTTCCGGGCAAACATAACTGCTGCGGATTCGGAGGAACGTTCTCAGTCAAGATGGCGCAGATTTCTGAGCA
GATGGTCGATGAAAAAGTCGAATGTGTGGAGGAAACGGGAGCAGAGGTGCTGATCGGTGCTGACTGCGGCTGTTTGATGA
ATATCGGGGGACGGCTTGGCCGAAAAGATAAGAATGTCAAAGTGATGCACATCGCCGAAGTGCTCAACAGCAGATAA

Upstream 100 bases:

>100_bases
TCCTTCCATTGTCAGAATAGTGTACGATATTCATATAGTTATTTTAACTCAGGTCATCAGATGACCTGATCATATATTGG
GGATGAGAGAGGGGTTCATC

Downstream 100 bases:

>100_bases
AACTGGATTCAGAGGGGGAAAGGATCATGGCGATGAAAATCGGTACTGACGCTTTTAAAGAGCGGGTATCACAGGGGATT
GATAATGAATTTATGAGAGG

Product: iron-sulfur heterodisulfide reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MKVSLFVTCLVDMFQTNVGKATVELLERLGCEVDFPEGQICCGQPAYNSGYVHDAKKAMKRMIETFQDSEYVVSPSGSCT
TMFREYPHLFQDDPKWADKAKKLADKTYELTDFIVNVLGVEDVGATLHTKATLHTSCHMTRLLGVRKEPMKLLSHVKGLQ
FTELPGKHNCCGFGGTFSVKMAQISEQMVDEKVECVEETGAEVLIGADCGCLMNIGGRLGRKDKNVKVMHIAEVLNSR

Sequences:

>Translated_238_residues
MKVSLFVTCLVDMFQTNVGKATVELLERLGCEVDFPEGQICCGQPAYNSGYVHDAKKAMKRMIETFQDSEYVVSPSGSCT
TMFREYPHLFQDDPKWADKAKKLADKTYELTDFIVNVLGVEDVGATLHTKATLHTSCHMTRLLGVRKEPMKLLSHVKGLQ
FTELPGKHNCCGFGGTFSVKMAQISEQMVDEKVECVEETGAEVLIGADCGCLMNIGGRLGRKDKNVKVMHIAEVLNSR
>Mature_238_residues
MKVSLFVTCLVDMFQTNVGKATVELLERLGCEVDFPEGQICCGQPAYNSGYVHDAKKAMKRMIETFQDSEYVVSPSGSCT
TMFREYPHLFQDDPKWADKAKKLADKTYELTDFIVNVLGVEDVGATLHTKATLHTSCHMTRLLGVRKEPMKLLSHVKGLQ
FTELPGKHNCCGFGGTFSVKMAQISEQMVDEKVECVEETGAEVLIGADCGCLMNIGGRLGRKDKNVKVMHIAEVLNSR

Specific function: Is essential for L-lactate degradation and allows cells to grow with lactate as the sole carbon source. May also allow cells to utilize an alternative carbon source during biofilm formation, since it contributes to the formation of architecturally complex

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lutA/ykgE family

Homologues:

Organism=Escherichia coli, GI1786497, Length=239, Percent_Identity=52.3012552301255, Blast_Score=262, Evalue=2e-71,
Organism=Escherichia coli, GI48994913, Length=221, Percent_Identity=22.1719457013575, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1788576, Length=221, Percent_Identity=27.6018099547511, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): LUTA_BACSU (O07020)

Other databases:

- EMBL:   Z94043
- EMBL:   AL009126
- PIR:   E70039
- RefSeq:   NP_391285.1
- EnsemblBacteria:   EBBACT00000003137
- GeneID:   936297
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU34050
- NMPDR:   fig|224308.1.peg.3411
- GenoList:   BSU34050
- GeneTree:   EBGT00050000002055
- HOGENOM:   HBG293488
- OMA:   GAYFPHR
- PhylomeDB:   O07020
- ProtClustDB:   CLSK2301485
- BioCyc:   BSUB:BSU34050-MONOMER
- HAMAP:   MF_02105
- InterPro:   IPR004017
- InterPro:   IPR022822

Pfam domain/function: PF02754 CCG

EC number: NA

Molecular weight: Translated: 26393; Mature: 26393

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
9.2 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
9.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVSLFVTCLVDMFQTNVGKATVELLERLGCEVDFPEGQICCGQPAYNSGYVHDAKKAMK
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEECCCCCEEECCCCCCCCCHHHHHHHHH
RMIETFQDSEYVVSPSGSCTTMFREYPHLFQDDPKWADKAKKLADKTYELTDFIVNVLGV
HHHHHHCCCCEEECCCCCHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EDVGATLHTKATLHTSCHMTRLLGVRKEPMKLLSHVKGLQFTELPGKHNCCGFGGTFSVK
HHCCCHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHH
MAQISEQMVDEKVECVEETGAEVLIGADCGCLMNIGGRLGRKDKNVKVMHIAEVLNSR
HHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHCCHHCCCCCCCCHHEEHHHHHHCC
>Mature Secondary Structure
MKVSLFVTCLVDMFQTNVGKATVELLERLGCEVDFPEGQICCGQPAYNSGYVHDAKKAMK
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEECCCCCEEECCCCCCCCCHHHHHHHHH
RMIETFQDSEYVVSPSGSCTTMFREYPHLFQDDPKWADKAKKLADKTYELTDFIVNVLGV
HHHHHHCCCCEEECCCCCHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EDVGATLHTKATLHTSCHMTRLLGVRKEPMKLLSHVKGLQFTELPGKHNCCGFGGTFSVK
HHCCCHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHH
MAQISEQMVDEKVECVEETGAEVLIGADCGCLMNIGGRLGRKDKNVKVMHIAEVLNSR
HHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHCCHHCCCCCCCCHHEEHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377