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The map label for this gene is yvfW

Identifier: 16080457

GI number: 16080457

Start: 3493519

End: 3494958

Strand: Reverse

Name: yvfW

Synonym: BSU34040

Alternate gene names: 16080457

Gene position: 3494958-3493519 (Counterclockwise)

Preceding gene: 16080458

Following gene: 16080456

Centisome position: 82.91

GC content: 49.65

Gene sequence:

>1440_bases
ATGGCGATGAAAATCGGTACTGACGCTTTTAAAGAGCGGGTATCACAGGGGATTGATAATGAATTTATGAGAGGCGCTGT
TTCAGGTGCACAGGAGCGTCTGCGGACGCGGCGCCTAGAGGCAGCAGAAGAACTGGGAAACTGGGAGGAGTGGCGCTCAT
TATCAGAGGAAATCAGGCAGCATGTCCTTGAAAACCTTGATTTCTATCTCGGACAGCTTGCCGAAAATGTGGCGAAAAGA
GGCGGACATGTCTATTTCGCGAAAACAGCGGAAGAGGCGTCTTCCTATATTCGGGATGTCATTCAAAAGAAGAACGGGAA
GAAAATTGTGAAATCTAAATCAATGGTCACAGAGGAAATCAATCTGAATGAGGTGCTGGAGAAGGAAGGCTGTGAAGTCG
TAGAAACCGATCTCGGCGAGTATATTTTGCAGATTGATGATCACGATCCGCCGTCACATATCGTAGCGCCCGCTCTTCAT
AAAAATAAAGAGCAGATACGCGATGTGTTTAAAGAAAGACTGGACTATCAACATACAGAAAAACCGGAAGAGCTGGTGAT
GCATGCGCGCGCCATTCTCCGGAAAAAGTTTCTGGAAGCGGATATCGGCATTACCGGCTGTAACTTCGCCATCGCTGACA
CGGGTTCCGTCAGCCTTGTGACCAATGAAGGAAATGGACGGCTTGTGAGCACCTTGCCGAAAACACAAATTACCGTCATG
GGAATGGAGCGGATTGTCCCGTCATTTTCTGAATTTGAAGTGCTAGTCAGCATGCTGACTAGAAGTGCTGTCGGACAGCG
GCTGACAAGCTATATTACAGCTTTGACGGGTCCGAAGCTGGAAGGTGAAGTGGACGGTCCGGAAGAATTCCATCTTGTCA
TCGTTGATAATGGACGATCCAATATCCTTGGAACGGAATTCCAGTCTGTGCTGCAATGTATCCGCTGTGCCGCCTGTATC
AATGTCTGTCCTGTGTACCGCCATGTCGGCGGACATTCATACGGCTCAATCTACTCGGGGCCGATCGGAGCTGTTTTATC
ACCGTTGCTCGGCGGTTATGACGATTATAAGGAGCTGCCGTACGCATCTTCACTGTGCGCTGCTTGTTCAGAAGCCTGCC
CGGTCAAAATCCCGCTTCATGAGCTGCTACTCAAGCATCGTCAGAATATCGTCGAAAAAGAAGGCAGGGCGCCGATCAGT
GAAAAGCTTGCAATGAAAGCATTCGGACTTGGCGCATCCTCCTTATCGCTTTACAAAATGGGCTCAAAATGGGCGCCGGC
CGCCATGACGCCTTTTACAGAGGACGAAAAAATTTCGAAAGGGCCCGGCCCGCTTAAAAATTGGACCCAGATTCGCGACT
TCCCGGCACCGCATAAATCGAGATTCAGAGACTGGTTTGCGGACAGAGAAACAAGTGAACGCACGAAGGAGGAGCAGTGA

Upstream 100 bases:

>100_bases
TCGGGGGACGGCTTGGCCGAAAAGATAAGAATGTCAAAGTGATGCACATCGCCGAAGTGCTCAACAGCAGATAAAACTGG
ATTCAGAGGGGGAAAGGATC

Downstream 100 bases:

>100_bases
TGACGAAGGGAACCATTCAGAATCAAGAGAGCTTTTTAAACCGAATCGCATCCAGCCTGGGCCGTGAACGAAGAACAGGA
GGCGTGGCAGTCCCTGAATG

Product: iron-sulfur oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 479; Mature: 478

Protein sequence:

>479_residues
MAMKIGTDAFKERVSQGIDNEFMRGAVSGAQERLRTRRLEAAEELGNWEEWRSLSEEIRQHVLENLDFYLGQLAENVAKR
GGHVYFAKTAEEASSYIRDVIQKKNGKKIVKSKSMVTEEINLNEVLEKEGCEVVETDLGEYILQIDDHDPPSHIVAPALH
KNKEQIRDVFKERLDYQHTEKPEELVMHARAILRKKFLEADIGITGCNFAIADTGSVSLVTNEGNGRLVSTLPKTQITVM
GMERIVPSFSEFEVLVSMLTRSAVGQRLTSYITALTGPKLEGEVDGPEEFHLVIVDNGRSNILGTEFQSVLQCIRCAACI
NVCPVYRHVGGHSYGSIYSGPIGAVLSPLLGGYDDYKELPYASSLCAACSEACPVKIPLHELLLKHRQNIVEKEGRAPIS
EKLAMKAFGLGASSLSLYKMGSKWAPAAMTPFTEDEKISKGPGPLKNWTQIRDFPAPHKSRFRDWFADRETSERTKEEQ

Sequences:

>Translated_479_residues
MAMKIGTDAFKERVSQGIDNEFMRGAVSGAQERLRTRRLEAAEELGNWEEWRSLSEEIRQHVLENLDFYLGQLAENVAKR
GGHVYFAKTAEEASSYIRDVIQKKNGKKIVKSKSMVTEEINLNEVLEKEGCEVVETDLGEYILQIDDHDPPSHIVAPALH
KNKEQIRDVFKERLDYQHTEKPEELVMHARAILRKKFLEADIGITGCNFAIADTGSVSLVTNEGNGRLVSTLPKTQITVM
GMERIVPSFSEFEVLVSMLTRSAVGQRLTSYITALTGPKLEGEVDGPEEFHLVIVDNGRSNILGTEFQSVLQCIRCAACI
NVCPVYRHVGGHSYGSIYSGPIGAVLSPLLGGYDDYKELPYASSLCAACSEACPVKIPLHELLLKHRQNIVEKEGRAPIS
EKLAMKAFGLGASSLSLYKMGSKWAPAAMTPFTEDEKISKGPGPLKNWTQIRDFPAPHKSRFRDWFADRETSERTKEEQ
>Mature_478_residues
AMKIGTDAFKERVSQGIDNEFMRGAVSGAQERLRTRRLEAAEELGNWEEWRSLSEEIRQHVLENLDFYLGQLAENVAKRG
GHVYFAKTAEEASSYIRDVIQKKNGKKIVKSKSMVTEEINLNEVLEKEGCEVVETDLGEYILQIDDHDPPSHIVAPALHK
NKEQIRDVFKERLDYQHTEKPEELVMHARAILRKKFLEADIGITGCNFAIADTGSVSLVTNEGNGRLVSTLPKTQITVMG
MERIVPSFSEFEVLVSMLTRSAVGQRLTSYITALTGPKLEGEVDGPEEFHLVIVDNGRSNILGTEFQSVLQCIRCAACIN
VCPVYRHVGGHSYGSIYSGPIGAVLSPLLGGYDDYKELPYASSLCAACSEACPVKIPLHELLLKHRQNIVEKEGRAPISE
KLAMKAFGLGASSLSLYKMGSKWAPAAMTPFTEDEKISKGPGPLKNWTQIRDFPAPHKSRFRDWFADRETSERTKEEQ

Specific function: Is essential for L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate. May also allow cells to utilize an alternative carbon source during biofi

COG id: COG1139

COG function: function code C; Uncharacterized conserved protein containing a ferredoxin-like domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains

Homologues:

Organism=Escherichia coli, GI1786498, Length=474, Percent_Identity=55.6962025316456, Blast_Score=561, Evalue=1e-161,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): LUTB_BACSU (O07021)

Other databases:

- EMBL:   AL009126
- PIR:   F70039
- RefSeq:   NP_391284.1
- ProteinModelPortal:   O07021
- SMR:   O07021
- EnsemblBacteria:   EBBACT00000004112
- GeneID:   938159
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU34040
- NMPDR:   fig|224308.1.peg.3410
- GenoList:   BSU34040
- GeneTree:   EBGT00050000001532
- HOGENOM:   HBG297510
- OMA:   HRQNIVE
- PhylomeDB:   O07021
- ProtClustDB:   CLSK2484791
- BioCyc:   BSUB:BSU34040-MONOMER
- GO:   GO:0006810
- HAMAP:   MF_02103
- InterPro:   IPR017900
- InterPro:   IPR003741
- InterPro:   IPR004452
- InterPro:   IPR002698
- InterPro:   IPR012285
- InterPro:   IPR009051
- InterPro:   IPR022825
- Gene3D:   G3DSA:3.40.50.10420
- Gene3D:   G3DSA:1.10.1060.10
- TIGRFAMs:   TIGR00273

Pfam domain/function: PF02589 DUF162; SSF46548 Helical_ferredxn

EC number: NA

Molecular weight: Translated: 53475; Mature: 53343

Theoretical pI: Translated: 6.21; Mature: 6.21

Prosite motif: PS00198 4FE4S_FER_1; PS51379 4FE4S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMKIGTDAFKERVSQGIDNEFMRGAVSGAQERLRTRRLEAAEELGNWEEWRSLSEEIRQ
CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
HVLENLDFYLGQLAENVAKRGGHVYFAKTAEEASSYIRDVIQKKNGKKIVKSKSMVTEEI
HHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
NLNEVLEKEGCEVVETDLGEYILQIDDHDPPSHIVAPALHKNKEQIRDVFKERLDYQHTE
CHHHHHHHCCCHHHHHHHHHHEEEECCCCCCCHHCCHHHHCCHHHHHHHHHHHHCCCCCC
KPEELVMHARAILRKKFLEADIGITGCNFAIADTGSVSLVTNEGNGRLVSTLPKTQITVM
CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEECCCCEEEECCCCHHHHEE
GMERIVPSFSEFEVLVSMLTRSAVGQRLTSYITALTGPKLEGEVDGPEEFHLVIVDNGRS
EHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCC
NILGTEFQSVLQCIRCAACINVCPVYRHVGGHSYGSIYSGPIGAVLSPLLGGYDDYKELP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHHCC
YASSLCAACSEACPVKIPLHELLLKHRQNIVEKEGRAPISEKLAMKAFGLGASSLSLYKM
CHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHC
GSKWAPAAMTPFTEDEKISKGPGPLKNWTQIRDFPAPHKSRFRDWFADRETSERTKEEQ
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCHHHHCCCCC
>Mature Secondary Structure 
AMKIGTDAFKERVSQGIDNEFMRGAVSGAQERLRTRRLEAAEELGNWEEWRSLSEEIRQ
CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
HVLENLDFYLGQLAENVAKRGGHVYFAKTAEEASSYIRDVIQKKNGKKIVKSKSMVTEEI
HHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
NLNEVLEKEGCEVVETDLGEYILQIDDHDPPSHIVAPALHKNKEQIRDVFKERLDYQHTE
CHHHHHHHCCCHHHHHHHHHHEEEECCCCCCCHHCCHHHHCCHHHHHHHHHHHHCCCCCC
KPEELVMHARAILRKKFLEADIGITGCNFAIADTGSVSLVTNEGNGRLVSTLPKTQITVM
CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEECCCCEEEECCCCHHHHEE
GMERIVPSFSEFEVLVSMLTRSAVGQRLTSYITALTGPKLEGEVDGPEEFHLVIVDNGRS
EHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCC
NILGTEFQSVLQCIRCAACINVCPVYRHVGGHSYGSIYSGPIGAVLSPLLGGYDDYKELP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHHCC
YASSLCAACSEACPVKIPLHELLLKHRQNIVEKEGRAPISEKLAMKAFGLGASSLSLYKM
CHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHC
GSKWAPAAMTPFTEDEKISKGPGPLKNWTQIRDFPAPHKSRFRDWFADRETSERTKEEQ
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377