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The map label for this gene is cggR

Identifier: 16080448

GI number: 16080448

Start: 3482752

End: 3483774

Strand: Reverse

Name: cggR

Synonym: BSU33950

Alternate gene names: 16080448

Gene position: 3483774-3482752 (Counterclockwise)

Preceding gene: 16080449

Following gene: 16080447

Centisome position: 82.64

GC content: 45.85

Gene sequence:

>1023_bases
ATGAACCAGTTAATACAAGCTCAAAAAAAATTATTGCCTGATCTTCTGCTCGTTATGCAAAAGAGGTTTGAAATCTTGCA
GTATATCAGGCTGACAGAACCCATCGGGCGAAGAAGCCTGTCTGCCAGTCTCGGAATCAGCGAGCGTGTGCTGAGGGGCG
AGGTTCAGTTTTTAAAGGAACAGAACCTGGTCGATATTAAGACAAACGGCATGACATTGACAGAAGAGGGCTATGAACTG
CTTTCTGTTTTGGAAGATACGATGAAAGATGTTTTAGGTTTGACTCTTTTGGAAAAGACATTAAAAGAACGTTTAAATCT
AAAGGATGCCATTATCGTATCCGGAGACAGCGATCAATCCCCATGGGTCAAAAAAGAAATGGGAAGAGCGGCTGTCGCAT
GTATGAAAAAAAGATTTTCAGGCAAAAATATCGTCGCTGTAACTGGCGGTACGACAATTGAAGCTGTCGCCGAAATGATG
ACGCCGGATTCTAAAAACCGCGAGCTTTTGTTTGTGCCTGCAAGAGGCGGTTTAGGCGAAGACGTGAAAAACCAGGCGAA
CACCATATGCGCGCATATGGCGGAGAAGGCTTCAGGCACTTACCGGCTTTTGTTTGTTCCGGGACAGCTGTCACAAGGCG
CCTATTCATCTATTATTGAAGAGCCTTCTGTCAAAGAGGTGCTGAACACCATTAAATCAGCGAGTATGCTGGTTCACGGA
ATCGGCGAAGCTAAAACTATGGCTCAGCGCAGAAACACGCCTTTAGAAGATTTAAAGAAAATAGATGATAACGACGCGGT
GACGGAAGCGTTCGGCTACTATTTTAACGCGGACGGCGAAGTGGTTCACAAAGTGCATTCTGTCGGAATGCAGCTGGATG
ACATAGACGCCATCCCCGATATTATTGCGGTAGCGGGCGGATCATCAAAAGCCGAAGCGATCGAGGCTTACTTTAAAAAG
CCACGCAACACGGTTCTCGTCACAGACGAAGGAGCCGCAAAGAAGTTATTAAGGGATGAATAA

Upstream 100 bases:

>100_bases
ATTAAAGAAAGCAGAAATGATTTTTTTTGGCTATGACGGGACGTTTTTTGTCATAGCGGGACATATAATGTCCAGCAAAA
AAGGAAGGAACGTTTGAGTC

Downstream 100 bases:

>100_bases
TCCCTCAATATAAATATCTCTCACTTATTTAAAGGAGGAAACAATCATGGCAGTAAAAGTCGGTATTAACGGTTTTGGTC
GTATTGGACGTAACGTATTC

Product: transcriptional regulator of gapA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MNQLIQAQKKLLPDLLLVMQKRFEILQYIRLTEPIGRRSLSASLGISERVLRGEVQFLKEQNLVDIKTNGMTLTEEGYEL
LSVLEDTMKDVLGLTLLEKTLKERLNLKDAIIVSGDSDQSPWVKKEMGRAAVACMKKRFSGKNIVAVTGGTTIEAVAEMM
TPDSKNRELLFVPARGGLGEDVKNQANTICAHMAEKASGTYRLLFVPGQLSQGAYSSIIEEPSVKEVLNTIKSASMLVHG
IGEAKTMAQRRNTPLEDLKKIDDNDAVTEAFGYYFNADGEVVHKVHSVGMQLDDIDAIPDIIAVAGGSSKAEAIEAYFKK
PRNTVLVTDEGAAKKLLRDE

Sequences:

>Translated_340_residues
MNQLIQAQKKLLPDLLLVMQKRFEILQYIRLTEPIGRRSLSASLGISERVLRGEVQFLKEQNLVDIKTNGMTLTEEGYEL
LSVLEDTMKDVLGLTLLEKTLKERLNLKDAIIVSGDSDQSPWVKKEMGRAAVACMKKRFSGKNIVAVTGGTTIEAVAEMM
TPDSKNRELLFVPARGGLGEDVKNQANTICAHMAEKASGTYRLLFVPGQLSQGAYSSIIEEPSVKEVLNTIKSASMLVHG
IGEAKTMAQRRNTPLEDLKKIDDNDAVTEAFGYYFNADGEVVHKVHSVGMQLDDIDAIPDIIAVAGGSSKAEAIEAYFKK
PRNTVLVTDEGAAKKLLRDE
>Mature_340_residues
MNQLIQAQKKLLPDLLLVMQKRFEILQYIRLTEPIGRRSLSASLGISERVLRGEVQFLKEQNLVDIKTNGMTLTEEGYEL
LSVLEDTMKDVLGLTLLEKTLKERLNLKDAIIVSGDSDQSPWVKKEMGRAAVACMKKRFSGKNIVAVTGGTTIEAVAEMM
TPDSKNRELLFVPARGGLGEDVKNQANTICAHMAEKASGTYRLLFVPGQLSQGAYSSIIEEPSVKEVLNTIKSASMLVHG
IGEAKTMAQRRNTPLEDLKKIDDNDAVTEAFGYYFNADGEVVHKVHSVGMQLDDIDAIPDIIAVAGGSSKAEAIEAYFKK
PRNTVLVTDEGAAKKLLRDE

Specific function: Represses the transcription of the gapA gene

COG id: COG2390

COG function: function code K; Transcriptional regulator, contains sigma factor-related N-terminal domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sorC transcriptional regulatory family

Homologues:

Organism=Escherichia coli, GI1787791, Length=253, Percent_Identity=24.901185770751, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): CGGR_BACSU (O32253)

Other databases:

- EMBL:   AL009126
- PIR:   C70030
- RefSeq:   NP_391275.1
- PDB:   2OKG
- PDB:   3BXE
- PDB:   3BXF
- PDB:   3BXG
- PDB:   3BXH
- PDBsum:   2OKG
- PDBsum:   3BXE
- PDBsum:   3BXF
- PDBsum:   3BXG
- PDBsum:   3BXH
- ProteinModelPortal:   O32253
- SMR:   O32253
- EnsemblBacteria:   EBBACT00000000568
- GeneID:   938570
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU33950
- NMPDR:   fig|224308.1.peg.3401
- GenoList:   BSU33950
- GeneTree:   EBGT00050000002398
- HOGENOM:   HBG305079
- OMA:   NQPIGRR
- ProtClustDB:   CLSK873644
- BioCyc:   BSUB:BSU33950-MONOMER
- GO:   GO:0006350
- InterPro:   IPR007324
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10

Pfam domain/function: PF04198 Sugar-bind

EC number: NA

Molecular weight: Translated: 37383; Mature: 37383

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQLIQAQKKLLPDLLLVMQKRFEILQYIRLTEPIGRRSLSASLGISERVLRGEVQFLKE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHC
QNLVDIKTNGMTLTEEGYELLSVLEDTMKDVLGLTLLEKTLKERLNLKDAIIVSGDSDQS
CCEEEEECCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC
PWVKKEMGRAAVACMKKRFSGKNIVAVTGGTTIEAVAEMMTPDSKNRELLFVPARGGLGE
CHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCCCCEEEEEECCCCCCH
DVKNQANTICAHMAEKASGTYRLLFVPGQLSQGAYSSIIEEPSVKEVLNTIKSASMLVHG
HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHC
IGEAKTMAQRRNTPLEDLKKIDDNDAVTEAFGYYFNADGEVVHKVHSVGMQLDDIDAIPD
CCHHHHHHHHCCCCHHHHHHCCCCHHHHHHHCCEECCCHHHHHHHHHHCCCCHHHHHHHH
IIAVAGGSSKAEAIEAYFKKPRNTVLVTDEGAAKKLLRDE
HHEECCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHCCC
>Mature Secondary Structure
MNQLIQAQKKLLPDLLLVMQKRFEILQYIRLTEPIGRRSLSASLGISERVLRGEVQFLKE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHC
QNLVDIKTNGMTLTEEGYELLSVLEDTMKDVLGLTLLEKTLKERLNLKDAIIVSGDSDQS
CCEEEEECCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC
PWVKKEMGRAAVACMKKRFSGKNIVAVTGGTTIEAVAEMMTPDSKNRELLFVPARGGLGE
CHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCCCCEEEEEECCCCCCH
DVKNQANTICAHMAEKASGTYRLLFVPGQLSQGAYSSIIEEPSVKEVLNTIKSASMLVHG
HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHC
IGEAKTMAQRRNTPLEDLKKIDDNDAVTEAFGYYFNADGEVVHKVHSVGMQLDDIDAIPD
CCHHHHHHHHCCCCHHHHHHCCCCHHHHHHHCCEECCCHHHHHHHHHHCCCCHHHHHHHH
IIAVAGGSSKAEAIEAYFKKPRNTVLVTDEGAAKKLLRDE
HHEECCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377