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The map label for this gene is opuCC

Identifier: 16080434

GI number: 16080434

Start: 3468253

End: 3469164

Strand: Reverse

Name: opuCC

Synonym: BSU33810

Alternate gene names: 16080434

Gene position: 3469164-3468253 (Counterclockwise)

Preceding gene: 16080435

Following gene: 16080433

Centisome position: 82.29

GC content: 44.63

Gene sequence:

>912_bases
ATGACAAAAATCAAATGGCTTGGCGCGTTTGCTCTCGTCTTTGTCATGCTGCTAGGCGGCTGCTCTCTGCCGGGTCTAGG
CGGCGCTTCTGACGATACGATCAAAATCGGGGCGCAGAGCATGACAGAATCAGAAATTGTAGCGAATATGATCGCGCAGC
TTATTGAACATGATACAGATTTGAATACTGCTTTAGTGAAAAACCTCGGCTCAAACTATGTTCAGCACCAAGCGATGCTG
GGCGGTGACATTGATATTTCAGCCACGCGCTATTCCGGAACAGATTTAACAAGCACCCTCGGCAAGGAAGCGGAGAAAGA
TCCGAAAAAAGCGCTGAACATTGTGCAGAACGAGTTTCAAAAGCGCTTTTCTTATAAATGGTTTGATTCCTACGGCTTTG
ATAACACATATGCCTTCACCGTAACAAAAAAGTTTGCGGAAAAGGAGCATATTAACACCGTGTCTGACCTGAAGAAAAAT
GCTTCCCAATATAAATTAGGCGTCGACAATGCTTGGCTGAAACGAAAAGGCGACGGGTATAAAGGCTTTGTCAGCACATA
TGGCTTTGAGTTCGGCACAACTTATCCAATGCAGATCGGGCTAGTCTATGACGCAGTCAAAAACGGGAAAATGGATGCGG
TTTTGGCTTATTCAACGGATGGACGGATTAAAGCATATGATCTGAAAATCTTAAAAGACGATAAGCGTTTCTTTCCGCCG
TATGACTGTTCACCGGTGATTCCGGAAAAGGTGCTTAAGGAGCATCCGGAACTTGAAGGTGTGATCAATAAGCTGATTGG
GCAAATCGACACGGAAACGATGCAGGAACTTAATTATGAGGTGGATGGCAAGCTGAAGGAGCCGTCTGTCGTAGCAAAGG
AATTTTTAGAGAAACATCATTATTTTGACTAA

Upstream 100 bases:

>100_bases
ATTATTATTGATTATGTTCTGGCTGTGACAGAACGAAAGGTGACGCCGAAAGGCTTGCAAGGGATGAAGGAAGTATCGTA
AGGAGTTGGCACTGTTGAAA

Downstream 100 bases:

>100_bases
GAAAAGAGGTGGATCATATGGAAGTACTACAGCAGCTTGGCACATACTATTCGCAAAACGGCGGTTACGTGCTGCAGGAA
TTTTACCGCCATTTTCTGAT

Product: glycine betaine/carnitine/choline/choline sulfate ABC transporter osmoprotectant-binding lipoprotein

Products: NA

Alternate protein names: Osmoprotectant-binding protein

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MTKIKWLGAFALVFVMLLGGCSLPGLGGASDDTIKIGAQSMTESEIVANMIAQLIEHDTDLNTALVKNLGSNYVQHQAML
GGDIDISATRYSGTDLTSTLGKEAEKDPKKALNIVQNEFQKRFSYKWFDSYGFDNTYAFTVTKKFAEKEHINTVSDLKKN
ASQYKLGVDNAWLKRKGDGYKGFVSTYGFEFGTTYPMQIGLVYDAVKNGKMDAVLAYSTDGRIKAYDLKILKDDKRFFPP
YDCSPVIPEKVLKEHPELEGVINKLIGQIDTETMQELNYEVDGKLKEPSVVAKEFLEKHHYFD

Sequences:

>Translated_303_residues
MTKIKWLGAFALVFVMLLGGCSLPGLGGASDDTIKIGAQSMTESEIVANMIAQLIEHDTDLNTALVKNLGSNYVQHQAML
GGDIDISATRYSGTDLTSTLGKEAEKDPKKALNIVQNEFQKRFSYKWFDSYGFDNTYAFTVTKKFAEKEHINTVSDLKKN
ASQYKLGVDNAWLKRKGDGYKGFVSTYGFEFGTTYPMQIGLVYDAVKNGKMDAVLAYSTDGRIKAYDLKILKDDKRFFPP
YDCSPVIPEKVLKEHPELEGVINKLIGQIDTETMQELNYEVDGKLKEPSVVAKEFLEKHHYFD
>Mature_302_residues
TKIKWLGAFALVFVMLLGGCSLPGLGGASDDTIKIGAQSMTESEIVANMIAQLIEHDTDLNTALVKNLGSNYVQHQAMLG
GDIDISATRYSGTDLTSTLGKEAEKDPKKALNIVQNEFQKRFSYKWFDSYGFDNTYAFTVTKKFAEKEHINTVSDLKKNA
SQYKLGVDNAWLKRKGDGYKGFVSTYGFEFGTTYPMQIGLVYDAVKNGKMDAVLAYSTDGRIKAYDLKILKDDKRFFPPY
DCSPVIPEKVLKEHPELEGVINKLIGQIDTETMQELNYEVDGKLKEPSVVAKEFLEKHHYFD

Specific function: Member of a high affinity multicomponent binding- protein-dependent transport system for glycine betaine, carnitine, and choline

COG id: COG1732

COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788452, Length=312, Percent_Identity=25.3205128205128, Blast_Score=96, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): OPUCC_BACSU (O32243)

Other databases:

- EMBL:   AF009352
- EMBL:   AL009126
- PIR:   E69670
- RefSeq:   NP_391261.1
- ProteinModelPortal:   O32243
- SMR:   O32243
- EnsemblBacteria:   EBBACT00000003791
- GeneID:   936248
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU33810
- NMPDR:   fig|224308.1.peg.3387
- GenoList:   BSU33810
- GeneTree:   EBGT00070000031878
- HOGENOM:   HBG694086
- OMA:   YGFADTY
- PhylomeDB:   O32243
- ProtClustDB:   CLSK885987
- BioCyc:   BSUB:BSU33810-MONOMER
- GO:   GO:0005488
- InterPro:   IPR007210

Pfam domain/function: PF04069 OpuAC

EC number: NA

Molecular weight: Translated: 33957; Mature: 33826

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKIKWLGAFALVFVMLLGGCSLPGLGGASDDTIKIGAQSMTESEIVANMIAQLIEHDTD
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCC
LNTALVKNLGSNYVQHQAMLGGDIDISATRYSGTDLTSTLGKEAEKDPKKALNIVQNEFQ
CHHHHHHHHCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHH
KRFSYKWFDSYGFDNTYAFTVTKKFAEKEHINTVSDLKKNASQYKLGVDNAWLKRKGDGY
HHHCCHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCHHHEEECCCHHHHHCCCCCC
KGFVSTYGFEFGTTYPMQIGLVYDAVKNGKMDAVLAYSTDGRIKAYDLKILKDDKRFFPP
CHHHHHCCCCCCCCCCEEEHHHHHHHCCCCCEEEEEECCCCCEEEEEEEEEECCCCCCCC
YDCSPVIPEKVLKEHPELEGVINKLIGQIDTETMQELNYEVDGKLKEPSVVAKEFLEKHH
CCCCCCCHHHHHHHCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHC
YFD
CCC
>Mature Secondary Structure 
TKIKWLGAFALVFVMLLGGCSLPGLGGASDDTIKIGAQSMTESEIVANMIAQLIEHDTD
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCC
LNTALVKNLGSNYVQHQAMLGGDIDISATRYSGTDLTSTLGKEAEKDPKKALNIVQNEFQ
CHHHHHHHHCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHH
KRFSYKWFDSYGFDNTYAFTVTKKFAEKEHINTVSDLKKNASQYKLGVDNAWLKRKGDGY
HHHCCHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCHHHEEECCCHHHHHCCCCCC
KGFVSTYGFEFGTTYPMQIGLVYDAVKNGKMDAVLAYSTDGRIKAYDLKILKDDKRFFPP
CHHHHHCCCCCCCCCCEEEHHHHHHHCCCCCEEEEEECCCCCEEEEEEEEEECCCCCCCC
YDCSPVIPEKVLKEHPELEGVINKLIGQIDTETMQELNYEVDGKLKEPSVVAKEFLEKHH
CCCCCCCHHHHHHHCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHC
YFD
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10216873; 9384377