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The map label for this gene is yvrE

Identifier: 16080373

GI number: 16080373

Start: 3405664

End: 3406542

Strand: Reverse

Name: yvrE

Synonym: BSU33200

Alternate gene names: 16080373

Gene position: 3406542-3405664 (Counterclockwise)

Preceding gene: 255767757

Following gene: 16080371

Centisome position: 80.81

GC content: 48.01

Gene sequence:

>879_bases
ATGGATGCAGTATTGGAAGCAGACACTCGGGCAGTGATTGGTGAAGGCCCGTTATGGGATGAAGAGAACGGCCGCTTATA
TTGGGTTGATATCCTGGGGAGCGAGCTCCACATCTTTGACCCTGAAGAAAAAATCAACCGATCAATCAAATTCAAATCCT
TTGTGACGGCGCTTGCGAAATATTCAAAGGATGAACTGATTATGACGATGAAGGACGGGTTTTACCTGTATCATCTTCGG
GATGACAGCTTGGAAAAAATTAAACAGCCGAAGGACATGCATGAGAGCCTGAGATTTAATGATGCTAAATGTGACCCGTA
CGGAAGGCTTTGGGCGGGGACGACGAGCATGGAAGGCGAGCAAAAACAGGCGTCGCTGTACCGTTTGAATCTAGACGGCA
GTCTTGTCAAAATCAAGGATCAAGTCTCCACCTCAAACGGTTTGGATTGGGACCGCGAGCGGAATTTGATGTATTACATC
GACACGCCGACCCAGGAGATTGTACGTTACAGCTATGATCCTCAAAGCGGAGATGTTTCGAATCCAGAACCTGTCTATCG
TTTTGATCAGTCAGACGGATTGCCGGACGGCATGACAATTGACCAAAATGGCATGCTGTGGGTGGCGCTGTTTGGCGGCA
GCCGCGTTGTTCACATTGACCCGTTTCAGAAAAAAGAAATCAATTCAATCAGCGTGCCGGCTAAATATGTCACGTGCTGC
GCGTTCGGCGGCAGAGACTTAAAAACCCTTTACATTACAACGGCAACAGAACAAATGACAGAAAAAGAGAGATACGAGCA
GCCTCACGCTGGAGGGTTGTTTTCAGCACAACTGGAAACAGGCGGATATCAGCCGGTACCATTTGCTGGAGACGTATAA

Upstream 100 bases:

>100_bases
TCATTACCATCCTTTTTAAAAAACAATAAACATCAAGTGGTTTGGACACCTCTTTGCCGGGAATAACAATATATAGACTG
AAGCTAAAGAGGTGTAACAC

Downstream 100 bases:

>100_bases
AAAAAACGCATCCGAAACACGGATGCGTTTTTTTATACTACAGAGAACGGATAATGCCGCCTTCCACACGCTGTGCCGTG
CCGTTAATGGCGGATGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MDAVLEADTRAVIGEGPLWDEENGRLYWVDILGSELHIFDPEEKINRSIKFKSFVTALAKYSKDELIMTMKDGFYLYHLR
DDSLEKIKQPKDMHESLRFNDAKCDPYGRLWAGTTSMEGEQKQASLYRLNLDGSLVKIKDQVSTSNGLDWDRERNLMYYI
DTPTQEIVRYSYDPQSGDVSNPEPVYRFDQSDGLPDGMTIDQNGMLWVALFGGSRVVHIDPFQKKEINSISVPAKYVTCC
AFGGRDLKTLYITTATEQMTEKERYEQPHAGGLFSAQLETGGYQPVPFAGDV

Sequences:

>Translated_292_residues
MDAVLEADTRAVIGEGPLWDEENGRLYWVDILGSELHIFDPEEKINRSIKFKSFVTALAKYSKDELIMTMKDGFYLYHLR
DDSLEKIKQPKDMHESLRFNDAKCDPYGRLWAGTTSMEGEQKQASLYRLNLDGSLVKIKDQVSTSNGLDWDRERNLMYYI
DTPTQEIVRYSYDPQSGDVSNPEPVYRFDQSDGLPDGMTIDQNGMLWVALFGGSRVVHIDPFQKKEINSISVPAKYVTCC
AFGGRDLKTLYITTATEQMTEKERYEQPHAGGLFSAQLETGGYQPVPFAGDV
>Mature_292_residues
MDAVLEADTRAVIGEGPLWDEENGRLYWVDILGSELHIFDPEEKINRSIKFKSFVTALAKYSKDELIMTMKDGFYLYHLR
DDSLEKIKQPKDMHESLRFNDAKCDPYGRLWAGTTSMEGEQKQASLYRLNLDGSLVKIKDQVSTSNGLDWDRERNLMYYI
DTPTQEIVRYSYDPQSGDVSNPEPVYRFDQSDGLPDGMTIDQNGMLWVALFGGSRVVHIDPFQKKEINSISVPAKYVTCC
AFGGRDLKTLYITTATEQMTEKERYEQPHAGGLFSAQLETGGYQPVPFAGDV

Specific function: Unknown

COG id: COG3386

COG function: function code G; Gluconolactonase

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SMP-30/CGR1 family

Homologues:

Organism=Homo sapiens, GI23111021, Length=296, Percent_Identity=33.1081081081081, Blast_Score=179, Evalue=2e-45,
Organism=Homo sapiens, GI4759036, Length=296, Percent_Identity=33.1081081081081, Blast_Score=179, Evalue=2e-45,
Organism=Drosophila melanogaster, GI24646912, Length=284, Percent_Identity=32.7464788732394, Blast_Score=142, Evalue=4e-34,
Organism=Drosophila melanogaster, GI24646910, Length=284, Percent_Identity=32.7464788732394, Blast_Score=142, Evalue=4e-34,
Organism=Drosophila melanogaster, GI45551448, Length=286, Percent_Identity=32.1678321678322, Blast_Score=138, Evalue=5e-33,
Organism=Drosophila melanogaster, GI24641471, Length=286, Percent_Identity=33.2167832167832, Blast_Score=138, Evalue=5e-33,
Organism=Drosophila melanogaster, GI18860103, Length=286, Percent_Identity=33.2167832167832, Blast_Score=138, Evalue=5e-33,
Organism=Drosophila melanogaster, GI24641469, Length=286, Percent_Identity=33.2167832167832, Blast_Score=138, Evalue=5e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YVRE_BACSU (O34940)

Other databases:

- EMBL:   AJ223978
- EMBL:   AL009126
- PIR:   A70047
- RefSeq:   NP_391200.1
- ProteinModelPortal:   O34940
- SMR:   O34940
- EnsemblBacteria:   EBBACT00000001282
- GeneID:   935979
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU33200
- NMPDR:   fig|224308.1.peg.3326
- GenoList:   BSU33200
- GeneTree:   EBGT00050000001200
- HOGENOM:   HBG607790
- OMA:   VDISNGM
- ProtClustDB:   CLSK2393401
- BioCyc:   BSUB:BSU33200-MONOMER
- GO:   GO:0005737
- InterPro:   IPR011042
- InterPro:   IPR013658
- InterPro:   IPR005511
- Gene3D:   G3DSA:2.120.10.30
- PRINTS:   PR01790

Pfam domain/function: PF08450 SGL

EC number: NA

Molecular weight: Translated: 33205; Mature: 33205

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAVLEADTRAVIGEGPLWDEENGRLYWVDILGSELHIFDPEEKINRSIKFKSFVTALAK
CCCCCCCCCEEEECCCCCCCCCCCEEEEEEEECCEEEEECCHHHHCCCEEHHHHHHHHHH
YSKDELIMTMKDGFYLYHLRDDSLEKIKQPKDMHESLRFNDAKCDPYGRLWAGTTSMEGE
CCCCEEEEEEECCEEEEEECCCHHHHHCCCHHHHHHCCCCCCCCCCCCCEEECCCCCCCC
QKQASLYRLNLDGSLVKIKDQVSTSNGLDWDRERNLMYYIDTPTQEIVRYSYDPQSGDVS
CCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCHHHHHEECCCCCCCCCC
NPEPVYRFDQSDGLPDGMTIDQNGMLWVALFGGSRVVHIDPFQKKEINSISVPAKYVTCC
CCCCEEEECCCCCCCCCEEECCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCHHEEEEE
AFGGRDLKTLYITTATEQMTEKERYEQPHAGGLFSAQLETGGYQPVPFAGDV
ECCCCCEEEEEEEECHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MDAVLEADTRAVIGEGPLWDEENGRLYWVDILGSELHIFDPEEKINRSIKFKSFVTALAK
CCCCCCCCCEEEECCCCCCCCCCCEEEEEEEECCEEEEECCHHHHCCCEEHHHHHHHHHH
YSKDELIMTMKDGFYLYHLRDDSLEKIKQPKDMHESLRFNDAKCDPYGRLWAGTTSMEGE
CCCCEEEEEEECCEEEEEECCCHHHHHCCCHHHHHHCCCCCCCCCCCCCEEECCCCCCCC
QKQASLYRLNLDGSLVKIKDQVSTSNGLDWDRERNLMYYIDTPTQEIVRYSYDPQSGDVS
CCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCHHHHHEECCCCCCCCCC
NPEPVYRFDQSDGLPDGMTIDQNGMLWVALFGGSRVVHIDPFQKKEINSISVPAKYVTCC
CCCCEEEECCCCCCCCCEEECCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCHHEEEEE
AFGGRDLKTLYITTATEQMTEKERYEQPHAGGLFSAQLETGGYQPVPFAGDV
ECCCCCEEEEEEEECHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377