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The map label for this gene is yusR

Identifier: 16080342

GI number: 16080342

Start: 3377019

End: 3377408

Strand: Reverse

Name: yusR

Synonym: BSU32900

Alternate gene names: 16080342

Gene position: 3377408-3377019 (Counterclockwise)

Preceding gene: 16080343

Following gene: 16080341

Centisome position: 80.12

GC content: 50.26

Gene sequence:

>390_bases
GTGAAAGGGATGTTTTTCTGCGCGCGGGCAGTGGTTCCGTTCATGAAGAAAAGCAAGGACGGGGCGATCGTAAACGTCGG
CAGCATCGCAGGGATAACTGGTGCCGGCTCATCAATGCCTTACGCAGTATCAAAATCAGCGGTGCACGGTTTAACGAAAT
CATTGGCCCACGCCTTAGCGCCTGAAATCAGAGTGAGCGGTGTAGCACCAGGAGCTGTGGCAACGAGATGGTGGGCCGGA
CGGGAAGAAAAAATGAAAAGCATGATCGGCTCTTTGCTGCTGCAGTGTATTGCTGAACCAGATGATGTTGCCAAATTGAT
TTGTTCACTAATTGAACAGGAATCACTCACAGGCCAAATTATCACAATTGACAGCGGACAGACGCTGTAA

Upstream 100 bases:

>100_bases
TGATATTTTAGTCAACAATGCCAGCATTACACGGCATATTCCAATGGATGATCTTGAGGCTGCGACAGAAGACGTCTAGG
ATGAGCTGTATGCCGTCAAT

Downstream 100 bases:

>100_bases
AGAAAGGGATGCGGGGAGATGCCATTTGTACAGATTCATTTACGGTCGGGAAGAAGCGAAGTGTGGCTTCAAAAACTGAG
CAGGACTATCCACCAATCGA

Product: 3-oxoacyl-acyl-carrier protein reductase

Products: 3-oxoacyl-[acyl-carrier protein]; NADPH; H+

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MKGMFFCARAVVPFMKKSKDGAIVNVGSIAGITGAGSSMPYAVSKSAVHGLTKSLAHALAPEIRVSGVAPGAVATRWWAG
REEKMKSMIGSLLLQCIAEPDDVAKLICSLIEQESLTGQIITIDSGQTL

Sequences:

>Translated_129_residues
MKGMFFCARAVVPFMKKSKDGAIVNVGSIAGITGAGSSMPYAVSKSAVHGLTKSLAHALAPEIRVSGVAPGAVATRWWAG
REEKMKSMIGSLLLQCIAEPDDVAKLICSLIEQESLTGQIITIDSGQTL
>Mature_129_residues
MKGMFFCARAVVPFMKKSKDGAIVNVGSIAGITGAGSSMPYAVSKSAVHGLTKSLAHALAPEIRVSGVAPGAVATRWWAG
REEKMKSMIGSLLLQCIAEPDDVAKLICSLIEQESLTGQIITIDSGQTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family

Homologues:

Organism=Homo sapiens, GI32483357, Length=125, Percent_Identity=38.4, Blast_Score=74, Evalue=5e-14,
Organism=Homo sapiens, GI126723750, Length=132, Percent_Identity=34.0909090909091, Blast_Score=65, Evalue=2e-11,
Organism=Homo sapiens, GI40254992, Length=129, Percent_Identity=33.3333333333333, Blast_Score=62, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YUSR_BACSU (O32184)

Other databases:

- EMBL:   AL009126
- PIR:   C70022
- RefSeq:   NP_391169.1
- ProteinModelPortal:   O32184
- SMR:   O32184
- EnsemblBacteria:   EBBACT00000003299
- GeneID:   937076
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU32900
- NMPDR:   fig|224308.1.peg.3295
- GenoList:   BSU32900
- GeneTree:   EBGT00070000031994
- HOGENOM:   HBG750976
- OMA:   NIGYCAS
- BioCyc:   BSUB:BSU32900-MONOMER
- GO:   GO:0005488
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904
- Gene3D:   G3DSA:3.40.50.720
- PANTHER:   PTHR19410
- PRINTS:   PR00081
- PRINTS:   PR00080

Pfam domain/function: PF00106 adh_short

EC number: 1.1.1.100

Molecular weight: Translated: 13477; Mature: 13477

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGMFFCARAVVPFMKKSKDGAIVNVGSIAGITGAGSSMPYAVSKSAVHGLTKSLAHALA
CCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
PEIRVSGVAPGAVATRWWAGREEKMKSMIGSLLLQCIAEPDDVAKLICSLIEQESLTGQI
CCCEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEE
ITIDSGQTL
EEECCCCCC
>Mature Secondary Structure
MKGMFFCARAVVPFMKKSKDGAIVNVGSIAGITGAGSSMPYAVSKSAVHGLTKSLAHALA
CCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
PEIRVSGVAPGAVATRWWAGREEKMKSMIGSLLLQCIAEPDDVAKLICSLIEQESLTGQI
CCCEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEE
ITIDSGQTL
EEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: (3R)-3-hydroxyacyl-[acyl-carrier protein]; NADP+

Specific reaction: (3R)-3-hydroxyacyl-[acyl-carrier protein] + NADP+ = 3-oxoacyl-[acyl-carrier protein] + NADPH + H+

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377