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The map label for this gene is yusS

Identifier: 16080343

GI number: 16080343

Start: 3377430

End: 3377759

Strand: Reverse

Name: yusS

Synonym: BSU32910

Alternate gene names: 16080343

Gene position: 3377759-3377430 (Counterclockwise)

Preceding gene: 16080345

Following gene: 16080342

Centisome position: 80.13

GC content: 48.48

Gene sequence:

>330_bases
ATGAATGTCTTGAACAAAATAGCTCTCGTAACGGGGGGCGGCACAGGAATCGGAAAAGCAGCCAGTATGGAATTGGCAAA
GCGTGGGGCGATTGTGGCGGTGAATTATTCACGCTCGCAATCAGAAGCGGAGGAAACAGTGGAAATGATTCAAAAAGCTG
GCGGGCAAGCCTTCGCCATCCAAGCAGATGTATCCAAAAACAGCGACGTGCAGGATATGATTCAAGCAATCGTGAACACA
CACGGCACGGTTGATATTTTAGTCAACAATGCCAGCATTACACGGCATATTCCAATGGATGATCTTGAGGCTGCGACAGA
AGACGTCTAG

Upstream 100 bases:

>100_bases
AGTGATATCTAGTATCTTTAACAATCATTATACGTAACATCAAAGCTGGATTACAATGGAATCAGAAATATACTTTAGTC
AACAGCAAGGAGTGGCGGCA

Downstream 100 bases:

>100_bases
GATGAGCTGTATGCCGTCAATGTGAAAGGGATGTTTTTCTGCGCGCGGGCAGTGGTTCCGTTCATGAAGAAAAGCAAGGA
CGGGGCGATCGTAAACGTCG

Product: 3-oxoacyl-acyl-carrier protein reductase

Products: 3-oxoacyl-[acyl-carrier protein]; NADPH; H+

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MNVLNKIALVTGGGTGIGKAASMELAKRGAIVAVNYSRSQSEAEETVEMIQKAGGQAFAIQADVSKNSDVQDMIQAIVNT
HGTVDILVNNASITRHIPMDDLEAATEDV

Sequences:

>Translated_109_residues
MNVLNKIALVTGGGTGIGKAASMELAKRGAIVAVNYSRSQSEAEETVEMIQKAGGQAFAIQADVSKNSDVQDMIQAIVNT
HGTVDILVNNASITRHIPMDDLEAATEDV
>Mature_109_residues
MNVLNKIALVTGGGTGIGKAASMELAKRGAIVAVNYSRSQSEAEETVEMIQKAGGQAFAIQADVSKNSDVQDMIQAIVNT
HGTVDILVNNASITRHIPMDDLEAATEDV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family

Homologues:

Organism=Escherichia coli, GI2367175, Length=87, Percent_Identity=47.1264367816092, Blast_Score=74, Evalue=3e-15,
Organism=Escherichia coli, GI1787905, Length=106, Percent_Identity=36.7924528301887, Blast_Score=62, Evalue=1e-11,
Organism=Escherichia coli, GI87082160, Length=103, Percent_Identity=38.8349514563107, Blast_Score=61, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17568967, Length=102, Percent_Identity=38.2352941176471, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28571526, Length=90, Percent_Identity=38.8888888888889, Blast_Score=66, Evalue=4e-12,
Organism=Drosophila melanogaster, GI21357041, Length=90, Percent_Identity=41.1111111111111, Blast_Score=65, Evalue=7e-12,
Organism=Drosophila melanogaster, GI21355631, Length=108, Percent_Identity=40.7407407407407, Blast_Score=65, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YUSS_BACSU (O32185)

Other databases:

- EMBL:   AL009126
- PIR:   D70022
- RefSeq:   NP_391170.1
- ProteinModelPortal:   O32185
- SMR:   O32185
- EnsemblBacteria:   EBBACT00000003178
- GeneID:   935924
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU32910
- NMPDR:   fig|224308.1.peg.3296
- GenoList:   BSU32910
- GeneTree:   EBGT00070000031994
- OMA:   CVNIAVE
- BioCyc:   BSUB:BSU32910-MONOMER
- GO:   GO:0005488
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- Gene3D:   G3DSA:3.40.50.720
- PANTHER:   PTHR19410
- PRINTS:   PR00081

Pfam domain/function: PF00106 adh_short

EC number: 1.1.1.100

Molecular weight: Translated: 11427; Mature: 11427

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVLNKIALVTGGGTGIGKAASMELAKRGAIVAVNYSRSQSEAEETVEMIQKAGGQAFAI
CCCHHEEEEEECCCCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEE
QADVSKNSDVQDMIQAIVNTHGTVDILVNNASITRHIPMDDLEAATEDV
EECCCCCCCHHHHHHHHHCCCCEEEEEEECCCEEEECCCHHHHHHCCCC
>Mature Secondary Structure
MNVLNKIALVTGGGTGIGKAASMELAKRGAIVAVNYSRSQSEAEETVEMIQKAGGQAFAI
CCCHHEEEEEECCCCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEE
QADVSKNSDVQDMIQAIVNTHGTVDILVNNASITRHIPMDDLEAATEDV
EECCCCCCCHHHHHHHHHCCCCEEEEEEECCCEEEECCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: (3R)-3-hydroxyacyl-[acyl-carrier protein]; NADP+

Specific reaction: (3R)-3-hydroxyacyl-[acyl-carrier protein] + NADP+ = 3-oxoacyl-[acyl-carrier protein] + NADPH + H+

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377