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The map label for this gene is pucC

Identifier: 16080302

GI number: 16080302

Start: 3338501

End: 3339334

Strand: Reverse

Name: pucC

Synonym: BSU32490

Alternate gene names: 16080302

Gene position: 3339334-3338501 (Counterclockwise)

Preceding gene: 255767746

Following gene: 16080301

Centisome position: 79.21

GC content: 52.76

Gene sequence:

>834_bases
TTGAACGGCCAAGTGACAAAAGCAAGGATGAATATTCAATTATGGAGACCGGCAGCGCTTGATGAGGCCTATTCGCTTTT
AGAGAAGCTTGCTCCGGATGTGTGTGCCGCATCGGGAAGCACGCTCCTTCAGCTTCAGTGGGACAAAGGAACTCTACCGA
AACAGCACCTTGTCAGCCTTGAAGGGATTGACGAAATGCGAGGGATCAGCACCAGTGACACCCACGTGTCGATCGGGGGG
CTCACATCACTGAATGAATGCAGAAAGAACCCTTTGATTAAGAGAGCGCTTAGCTGTTTCAGTGACGCTGCTTCCGCTGT
CGCTGCACCGGGGATTCGCAGCCGTGCCACGATTGGCGGCAACATAGCGAGTAAAATCGGTGATTTCATTCCGCTTCTGC
TTGTGCTTGGTGCTGAGCTTATCGTATATCAAAAGGAGCTAATCAGGCTGCCGCTTGGCGCTTGGCTCAGTGAGGAAGAC
TTTAGAACGGCTATCGTCACGCGTGTCATCATCCCGCGGGCGGAGGGAGAGCGTGTATTTTATCACAAGCTTGGAAGGCG
CCAGGCTTTTACCGGAGCGGCTGCTGTTGCAGCTGGACGTTTTTTGAAAGACGGCAGCATTCGCCTCGCCGCTGGCCATG
CCGATATCACTCCTAGGAGATTATTGGACAGCGAAGCGAAATGGATGGCACCAGGGTGGGACCCGCATGAGCTGTACAAA
ACACTTATCCATGAGCTGCCGTTTTCCTCAGATGTTTTTATGTCAGCGGCATACAGAAAAAAAGCCGCTGCCAACGTCAT
CATGGCAGAGCTGATGGCTGAGGGAGGGGAATAA

Upstream 100 bases:

>100_bases
GACAGCTTGGAGCAGGAGCGGTTTTGGAGGCAAAGGATAGCGGTGAGTTGGACGATATTGATACACCCGAGGAATATGAC
ATGGTAAGGAGGGCGATGTC

Downstream 100 bases:

>100_bases
ATGATCATCAACAAACCGTCAAGAGTCAGGCCGGATGGAAGGGGTAAGGTCACAGGGGAATTGAAATATATGACCGATCT
CAGCTTTCCAGGAATGCTGT

Product: xanthine dehydrogenase, FAD-binding subunit

Products: NA

Alternate protein names: XDHase subunit C

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MNGQVTKARMNIQLWRPAALDEAYSLLEKLAPDVCAASGSTLLQLQWDKGTLPKQHLVSLEGIDEMRGISTSDTHVSIGG
LTSLNECRKNPLIKRALSCFSDAASAVAAPGIRSRATIGGNIASKIGDFIPLLLVLGAELIVYQKELIRLPLGAWLSEED
FRTAIVTRVIIPRAEGERVFYHKLGRRQAFTGAAAVAAGRFLKDGSIRLAAGHADITPRRLLDSEAKWMAPGWDPHELYK
TLIHELPFSSDVFMSAAYRKKAAANVIMAELMAEGGE

Sequences:

>Translated_277_residues
MNGQVTKARMNIQLWRPAALDEAYSLLEKLAPDVCAASGSTLLQLQWDKGTLPKQHLVSLEGIDEMRGISTSDTHVSIGG
LTSLNECRKNPLIKRALSCFSDAASAVAAPGIRSRATIGGNIASKIGDFIPLLLVLGAELIVYQKELIRLPLGAWLSEED
FRTAIVTRVIIPRAEGERVFYHKLGRRQAFTGAAAVAAGRFLKDGSIRLAAGHADITPRRLLDSEAKWMAPGWDPHELYK
TLIHELPFSSDVFMSAAYRKKAAANVIMAELMAEGGE
>Mature_277_residues
MNGQVTKARMNIQLWRPAALDEAYSLLEKLAPDVCAASGSTLLQLQWDKGTLPKQHLVSLEGIDEMRGISTSDTHVSIGG
LTSLNECRKNPLIKRALSCFSDAASAVAAPGIRSRATIGGNIASKIGDFIPLLLVLGAELIVYQKELIRLPLGAWLSEED
FRTAIVTRVIIPRAEGERVFYHKLGRRQAFTGAAAVAAGRFLKDGSIRLAAGHADITPRRLLDSEAKWMAPGWDPHELYK
TLIHELPFSSDVFMSAAYRKKAAANVIMAELMAEGGE

Specific function: Oxidizes hypoxanthine and xanthine to uric acid

COG id: COG1319

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): XDHC_BACSU (O32145)

Other databases:

- EMBL:   AL009126
- PIR:   C70017
- RefSeq:   NP_391129.1
- ProteinModelPortal:   O32145
- SMR:   O32145
- EnsemblBacteria:   EBBACT00000000909
- GeneID:   936685
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU32490
- NMPDR:   fig|224308.1.peg.3255
- GenoList:   BSU32490
- GeneTree:   EBGT00050000006219
- OMA:   LEGIDEM
- ProtClustDB:   CLSK2752502
- BioCyc:   BSUB:BSU32490-MONOMER
- BRENDA:   1.17.1.4
- InterPro:   IPR005107
- InterPro:   IPR016169
- InterPro:   IPR016166
- InterPro:   IPR002346
- InterPro:   IPR017612
- Gene3D:   G3DSA:3.30.390.50
- Gene3D:   G3DSA:3.30.465.10
- TIGRFAMs:   TIGR03199

Pfam domain/function: PF00941 FAD_binding_5; SSF55447 CO_deh_flav_C; SSF56176 FAD-binding_2

EC number: =1.17.1.4

Molecular weight: Translated: 30119; Mature: 30119

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: PS51387 FAD_PCMH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGQVTKARMNIQLWRPAALDEAYSLLEKLAPDVCAASGSTLLQLQWDKGTLPKQHLVSL
CCCCEEEEEEEEEEECCHHHHHHHHHHHHHCHHHHHCCCCEEEEEEECCCCCCHHHHHHH
EGIDEMRGISTSDTHVSIGGLTSLNECRKNPLIKRALSCFSDAASAVAAPGIRSRATIGG
CCHHHHCCCCCCCCEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
NIASKIGDFIPLLLVLGAELIVYQKELIRLPLGAWLSEEDFRTAIVTRVIIPRAEGERVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHH
YHKLGRRQAFTGAAAVAAGRFLKDGSIRLAAGHADITPRRLLDSEAKWMAPGWDPHELYK
HHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHCCCCCCCCCCCCHHHHHH
TLIHELPFSSDVFMSAAYRKKAAANVIMAELMAEGGE
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNGQVTKARMNIQLWRPAALDEAYSLLEKLAPDVCAASGSTLLQLQWDKGTLPKQHLVSL
CCCCEEEEEEEEEEECCHHHHHHHHHHHHHCHHHHHCCCCEEEEEEECCCCCCHHHHHHH
EGIDEMRGISTSDTHVSIGGLTSLNECRKNPLIKRALSCFSDAASAVAAPGIRSRATIGG
CCHHHHCCCCCCCCEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
NIASKIGDFIPLLLVLGAELIVYQKELIRLPLGAWLSEEDFRTAIVTRVIIPRAEGERVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHH
YHKLGRRQAFTGAAAVAAGRFLKDGSIRLAAGHADITPRRLLDSEAKWMAPGWDPHELYK
HHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHCCCCCCCCCCCCHHHHHH
TLIHELPFSSDVFMSAAYRKKAAANVIMAELMAEGGE
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 11344136