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The map label for this gene is yuxH

Identifier: 16080225

GI number: 16080225

Start: 3258037

End: 3259266

Strand: Reverse

Name: yuxH

Synonym: BSU31740

Alternate gene names: 16080225

Gene position: 3259266-3258037 (Counterclockwise)

Preceding gene: 16080226

Following gene: 16080223

Centisome position: 77.31

GC content: 40.49

Gene sequence:

>1230_bases
ATGAGGGTGTTTGTTGCAAGACAGCCTATTTTTAATAGAAAAGAACAGGTTGTTGCTTATGAACTGCTGTATAGAGAAAG
CGAAGAGAACGTGTATAGCGCTAAAGACGGCGATCAGGCAACAACAGATTTGGTGATCAACAGCTTTTTAAACATCGGAA
TTGAGAAGCTGACGGAAGGGAAACGCTGTTTTGTTAATTTTACGGAAAGCCTGATGTTTTCGAATCTTCCCACCTCCTTC
AATCCGAAACAGCTTGTCATTGAAATCCTTGAAGATATACCGATCACGCCGGCCCTCATTTCTAGATGCAAAGAATTGAA
AAAAATGGGGTATATGCTGGCGCTTGATGATTTTTATGCAATAAATCCGCAAGATGAGGACTTACTGGAAAAACTCATGA
GCTATATTGATATATTGAAAATTGATTTTCTCAAAACAACACGAATGGAACGCAGAACAATTTTGCAAACCTACGGCTGC
CGCGGCCTGATTTTTTTAGCGGAAAAAGTAGAGACCCGAAAAGAATATAAACAGGCGGTCCAAGACGGCTTTCAATTATT
CCAAGGCTACTTTTTCAGCGAGCCGCGCATCATCAGCGGGCATGACCTATCGACTCATTTCTATTCTTACTATGAACTGC
TTAACGAACTGAGTAAAGAGCAGCCTAACATAAAGCGTGTGACAGAGTACATAGAGCGGGATTTATCACTGTCCTATCAA
ATTTTAAAATTTTTAAACTCATCCCACAGCCGTTTGAGCCAGAAAATTGAAAGCATTCAACAGGCCATTATGCTGCTGGG
ATTTAATGAAATCAAACGGTGGATATATATTCTTTCCTTTAAGGATTTAAGCAGGAAAGGGCATTCCAGCAAGCACGAAA
TCATTAAGATTTCTCTGATAAGAGCAAAGCTTTGCGAACTGCTGGCGAGAAAGACATCCCGGCCGCAGCCTGCTTCTTAT
ATGCTGATCGGAATGTTTTCTCTCATAGACACCCTCCTGCATAGAGAAATAGAGGAAATTGTTCAAGAATTGCCTTTAAA
AGATGAAGTCGGGCAAGCATTATTAGGCCATCAAAACGACTACTACCAAATGCTTGAGCTTGTGAAATTAATTGAAAGCA
ACAACTGGGACACTTGCTCAGAATTAGGCAATCAACTGGACAAAGAAGAAGCGTATGAATGTTATTTAGAGGCTCTGGAA
TGGTGTCATAATCTTATGGACGCAAAATGA

Upstream 100 bases:

>100_bases
TCTTTATGTATATATTATTTTTCATGTTTAGACAATTTTCGTCAAATTATTTGATATACTTAGGGGTGAAAGCCGCGCGT
ATTGTAAGGGGGATAAATCA

Downstream 100 bases:

>100_bases
TTGCGGTCCTCTGACCACCGCAAAGCAAGAATCATTCGGCTTTGCGTTCCGATAAGGCTGATATAGATGCCGTCGGGATT
AAAGACCGTATCCACTTCAT

Product: phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MRVFVARQPIFNRKEQVVAYELLYRESEENVYSAKDGDQATTDLVINSFLNIGIEKLTEGKRCFVNFTESLMFSNLPTSF
NPKQLVIEILEDIPITPALISRCKELKKMGYMLALDDFYAINPQDEDLLEKLMSYIDILKIDFLKTTRMERRTILQTYGC
RGLIFLAEKVETRKEYKQAVQDGFQLFQGYFFSEPRIISGHDLSTHFYSYYELLNELSKEQPNIKRVTEYIERDLSLSYQ
ILKFLNSSHSRLSQKIESIQQAIMLLGFNEIKRWIYILSFKDLSRKGHSSKHEIIKISLIRAKLCELLARKTSRPQPASY
MLIGMFSLIDTLLHREIEEIVQELPLKDEVGQALLGHQNDYYQMLELVKLIESNNWDTCSELGNQLDKEEAYECYLEALE
WCHNLMDAK

Sequences:

>Translated_409_residues
MRVFVARQPIFNRKEQVVAYELLYRESEENVYSAKDGDQATTDLVINSFLNIGIEKLTEGKRCFVNFTESLMFSNLPTSF
NPKQLVIEILEDIPITPALISRCKELKKMGYMLALDDFYAINPQDEDLLEKLMSYIDILKIDFLKTTRMERRTILQTYGC
RGLIFLAEKVETRKEYKQAVQDGFQLFQGYFFSEPRIISGHDLSTHFYSYYELLNELSKEQPNIKRVTEYIERDLSLSYQ
ILKFLNSSHSRLSQKIESIQQAIMLLGFNEIKRWIYILSFKDLSRKGHSSKHEIIKISLIRAKLCELLARKTSRPQPASY
MLIGMFSLIDTLLHREIEEIVQELPLKDEVGQALLGHQNDYYQMLELVKLIESNNWDTCSELGNQLDKEEAYECYLEALE
WCHNLMDAK
>Mature_409_residues
MRVFVARQPIFNRKEQVVAYELLYRESEENVYSAKDGDQATTDLVINSFLNIGIEKLTEGKRCFVNFTESLMFSNLPTSF
NPKQLVIEILEDIPITPALISRCKELKKMGYMLALDDFYAINPQDEDLLEKLMSYIDILKIDFLKTTRMERRTILQTYGC
RGLIFLAEKVETRKEYKQAVQDGFQLFQGYFFSEPRIISGHDLSTHFYSYYELLNELSKEQPNIKRVTEYIERDLSLSYQ
ILKFLNSSHSRLSQKIESIQQAIMLLGFNEIKRWIYILSFKDLSRKGHSSKHEIIKISLIRAKLCELLARKTSRPQPASY
MLIGMFSLIDTLLHREIEEIVQELPLKDEVGQALLGHQNDYYQMLELVKLIESNNWDTCSELGNQLDKEEAYECYLEALE
WCHNLMDAK

Specific function: Unknown

COG id: COG3434

COG function: function code T; Predicted signal transduction protein containing EAL and modified HD-GYP domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YUXH_BACSU (P14203)

Other databases:

- EMBL:   M22855
- EMBL:   Z93932
- EMBL:   AL009126
- PIR:   C33591
- RefSeq:   NP_391052.1
- ProteinModelPortal:   P14203
- EnsemblBacteria:   EBBACT00000001896
- GeneID:   937185
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU31740
- NMPDR:   fig|224308.1.peg.3177
- GenoList:   BSU31740
- GeneTree:   EBGT00050000001342
- HOGENOM:   HBG537479
- OMA:   FNERDIP
- ProtClustDB:   CLSK887809
- BioCyc:   BSUB:BSU31740-MONOMER
- InterPro:   IPR014408
- InterPro:   IPR001633
- InterPro:   IPR013976
- Gene3D:   G3DSA:1.10.3150.10
- PIRSF:   PIRSF003180
- SMART:   SM00052

Pfam domain/function: PF00563 EAL; PF08668 HDOD

EC number: NA

Molecular weight: Translated: 47928; Mature: 47928

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVFVARQPIFNRKEQVVAYELLYRESEENVYSAKDGDQATTDLVINSFLNIGIEKLTEG
CEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
KRCFVNFTESLMFSNLPTSFNPKQLVIEILEDIPITPALISRCKELKKMGYMLALDDFYA
CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEECCEEE
INPQDEDLLEKLMSYIDILKIDFLKTTRMERRTILQTYGCRGLIFLAEKVETRKEYKQAV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
QDGFQLFQGYFFSEPRIISGHDLSTHFYSYYELLNELSKEQPNIKRVTEYIERDLSLSYQ
HHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ILKFLNSSHSRLSQKIESIQQAIMLLGFNEIKRWIYILSFKDLSRKGHSSKHEIIKISLI
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
RAKLCELLARKTSRPQPASYMLIGMFSLIDTLLHREIEEIVQELPLKDEVGQALLGHQND
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCH
YYQMLELVKLIESNNWDTCSELGNQLDKEEAYECYLEALEWCHNLMDAK
HHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRVFVARQPIFNRKEQVVAYELLYRESEENVYSAKDGDQATTDLVINSFLNIGIEKLTEG
CEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
KRCFVNFTESLMFSNLPTSFNPKQLVIEILEDIPITPALISRCKELKKMGYMLALDDFYA
CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEECCEEE
INPQDEDLLEKLMSYIDILKIDFLKTTRMERRTILQTYGCRGLIFLAEKVETRKEYKQAV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
QDGFQLFQGYFFSEPRIISGHDLSTHFYSYYELLNELSKEQPNIKRVTEYIERDLSLSYQ
HHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ILKFLNSSHSRLSQKIESIQQAIMLLGFNEIKRWIYILSFKDLSRKGHSSKHEIIKISLI
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
RAKLCELLARKTSRPQPASYMLIGMFSLIDTLLHREIEEIVQELPLKDEVGQALLGHQND
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCH
YYQMLELVKLIESNNWDTCSELGNQLDKEEAYECYLEALEWCHNLMDAK
HHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2507523; 9274030; 9384377; 1943994