Click here to switch to the map view.

The map label for this gene is comX

Identifier: 16080221

GI number: 16080221

Start: 3255853

End: 3256020

Strand: Reverse

Name: comX

Synonym: BSU31700

Alternate gene names: 16080221

Gene position: 3256020-3255853 (Counterclockwise)

Preceding gene: 255767725

Following gene: 255767724

Centisome position: 77.24

GC content: 30.36

Gene sequence:

>168_bases
ATGCAAGACCTAATTAACTACTTTTTAAATTATCCTGAGGCTTTAAAAAAATTGAAAAATAAAGAAGCCTGCCTTATAGG
TTTTGATGTGCAAGAAACTGAAACAATAATTAAAGCTTATAATGATTATTATCTGGCTGATCCAATAACCCGTCAATGGG
GTGATTAA

Upstream 100 bases:

>100_bases
AACAGAAATGTATTTCTGCTATAGAACAATTAAATTTAGATAAAGAAAAAAAAGAGCTAATAAAGGAATGCTTATTAAGT
TATACAAAGGGGGATACAAG

Downstream 100 bases:

>100_bases
TAGGTGGATTAATATTGAAGAACTTAATAAAAAAATTCACAATAGCTGTAATTGTTTTGAGTATCCTTTATATAAGCTAT
ACAACTTATATCAGTATGAA

Product: competence pheromone precursor (pheromone peptide aa 46->55, modified)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 55; Mature: 55

Protein sequence:

>55_residues
MQDLINYFLNYPEALKKLKNKEACLIGFDVQETETIIKAYNDYYLADPITRQWGD

Sequences:

>Translated_55_residues
MQDLINYFLNYPEALKKLKNKEACLIGFDVQETETIIKAYNDYYLADPITRQWGD
>Mature_55_residues
MQDLINYFLNYPEALKKLKNKEACLIGFDVQETETIIKAYNDYYLADPITRQWGD

Specific function: Part of a major quorum-sensing system that regulates the development of genetic competence. Acts through the activation of the two-component regulatory system ComP/ComA composed of a sensor histidine kinase, ComP, and a response regulator, ComA, that regu

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): COMX1_BACSU (P45453)

Other databases:

- EMBL:   M71283
- EMBL:   AL009126
- PIR:   B38111
- RefSeq:   NP_391048.1
- EnsemblBacteria:   EBBACT00000001151
- GeneID:   938875
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU31700
- NMPDR:   fig|224308.1.peg.3173
- GenoList:   BSU31700
- BioCyc:   BSUB:BSU31700-MONOMER
- InterPro:   IPR009233

Pfam domain/function: PF05952 ComX

EC number: NA

Molecular weight: Translated: 6518; Mature: 6518

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDLINYFLNYPEALKKLKNKEACLIGFDVQETETIIKAYNDYYLADPITRQWGD
CHHHHHHHCCCHHHHHHHCCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQDLINYFLNYPEALKKLKNKEACLIGFDVQETETIIKAYNDYYLADPITRQWGD
CHHHHHHHCCCHHHHHHHCCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2116363; 9384377; 8168130; 12067344