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The map label for this gene is yugP

Identifier: 16080183

GI number: 16080183

Start: 3217496

End: 3218173

Strand: Reverse

Name: yugP

Synonym: BSU31310

Alternate gene names: 16080183

Gene position: 3218173-3217496 (Counterclockwise)

Preceding gene: 255767710

Following gene: 255767709

Centisome position: 76.34

GC content: 45.58

Gene sequence:

>678_bases
ATGCTGTTTATATTTTTAACAATAGCCGCATTGGGATTGTCGTTTTGGGCACAATTTAAAGTAAAGAGCAACTTTGAAAA
ATATTCAAAAGTGGAAGCCTCAAGCGGACGTACAGGGGCAGAAACGGCAAGACGGATTTTAGATATAAACGGTCTTTACG
ACGTGCCGGTCGAACCGGTAAGAGGCACTTTAACAGACCATTACGACCCGACAAGACGGGTGGTGCGTTTATCTGAGCCG
GTCTATTACGGCCGCTCAATTTCCGCCATATCCGTAGCTTCCCATGAAGTCGGACATGCCTTGCAGCATCAGGAGTCATA
TGGTGCGCTTGTGCTGAGACATAAAATCTTCCCAGTCGTGAATTTTGCATCCGGTGTAGCTCCTTTGCTTTTCTTAGGAG
GCATGCTTCTCGGCAGCCTGAATTTGATCGGGCTTGGCATCATACTGTTTTCAGCGGCTGTCTTTTTCCAGCTGATTACA
TTGCCTGTCGAATTCAATGCAAGTTCACGTGCGAAGCAGATTATTGTGTCAGAAGGATTCATCCGAAACAATGAAGAAAA
TGGGGTAAATAAAGTGCTGAGTGCTGCTGCCTTAACGTATGTGGCCGCCGCCCTGGTTTCCCTGTTTGAACTACTTCGTT
TTGTGATGATTTTCTTAAACGGTCGTGATGAGAATTAA

Upstream 100 bases:

>100_bases
CTCCAAGCCGGAAGAAAAAGCGCATTTCTGTACACGAGAAAGAAAACTCATTAAAATAATCGTAATAGAGAAATGATCAT
GAACAAAGGATGATGAAAAA

Downstream 100 bases:

>100_bases
CGTTAAGGAGGTGGCCCCTTACCATTTATGGTAAGGGCTTTTTTTGCTTATTTTACAATTGATCGCCATTTTTGTTTTGA
TTGGCATTACGGCTGTTTTC

Product: metal-dependent protease/peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MLFIFLTIAALGLSFWAQFKVKSNFEKYSKVEASSGRTGAETARRILDINGLYDVPVEPVRGTLTDHYDPTRRVVRLSEP
VYYGRSISAISVASHEVGHALQHQESYGALVLRHKIFPVVNFASGVAPLLFLGGMLLGSLNLIGLGIILFSAAVFFQLIT
LPVEFNASSRAKQIIVSEGFIRNNEENGVNKVLSAAALTYVAAALVSLFELLRFVMIFLNGRDEN

Sequences:

>Translated_225_residues
MLFIFLTIAALGLSFWAQFKVKSNFEKYSKVEASSGRTGAETARRILDINGLYDVPVEPVRGTLTDHYDPTRRVVRLSEP
VYYGRSISAISVASHEVGHALQHQESYGALVLRHKIFPVVNFASGVAPLLFLGGMLLGSLNLIGLGIILFSAAVFFQLIT
LPVEFNASSRAKQIIVSEGFIRNNEENGVNKVLSAAALTYVAAALVSLFELLRFVMIFLNGRDEN
>Mature_225_residues
MLFIFLTIAALGLSFWAQFKVKSNFEKYSKVEASSGRTGAETARRILDINGLYDVPVEPVRGTLTDHYDPTRRVVRLSEP
VYYGRSISAISVASHEVGHALQHQESYGALVLRHKIFPVVNFASGVAPLLFLGGMLLGSLNLIGLGIILFSAAVFFQLIT
LPVEFNASSRAKQIIVSEGFIRNNEENGVNKVLSAAALTYVAAALVSLFELLRFVMIFLNGRDEN

Specific function: Unknown

COG id: COG2738

COG function: function code R; Predicted Zn-dependent protease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YUGP_BACSU (O05248)

Other databases:

- EMBL:   Z93936
- EMBL:   AL009126
- PIR:   F70011
- RefSeq:   NP_391009.1
- ProteinModelPortal:   O05248
- EnsemblBacteria:   EBBACT00000002451
- GeneID:   938850
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU31310
- NMPDR:   fig|224308.1.peg.3134
- GenoList:   BSU31310
- GeneTree:   EBGT00050000002217
- HOGENOM:   HBG537686
- OMA:   VANFGSN
- ProtClustDB:   CLSK872895
- BioCyc:   BSUB:BSU31310-MONOMER
- InterPro:   IPR007395

Pfam domain/function: PF04298 Zn_peptidase_2

EC number: NA

Molecular weight: Translated: 24695; Mature: 24695

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: ACT_SITE 96-96

Signals:

None

Transmembrane regions:

HASH(0x1206e460)-; HASH(0x11f89580)-; HASH(0x112ac580)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFIFLTIAALGLSFWAQFKVKSNFEKYSKVEASSGRTGAETARRILDINGLYDVPVEPV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCC
RGTLTDHYDPTRRVVRLSEPVYYGRSISAISVASHEVGHALQHQESYGALVLRHKIFPVV
CCCCCCCCCHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NFASGVAPLLFLGGMLLGSLNLIGLGIILFSAAVFFQLITLPVEFNASSRAKQIIVSEGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCHHHHHHHHHCCC
IRNNEENGVNKVLSAAALTYVAAALVSLFELLRFVMIFLNGRDEN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
>Mature Secondary Structure
MLFIFLTIAALGLSFWAQFKVKSNFEKYSKVEASSGRTGAETARRILDINGLYDVPVEPV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCC
RGTLTDHYDPTRRVVRLSEPVYYGRSISAISVASHEVGHALQHQESYGALVLRHKIFPVV
CCCCCCCCCHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NFASGVAPLLFLGGMLLGSLNLIGLGIILFSAAVFFQLITLPVEFNASSRAKQIIVSEGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCHHHHHHHHHCCC
IRNNEENGVNKVLSAAALTYVAAALVSLFELLRFVMIFLNGRDEN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377