Click here to switch to the map view.

The map label for this gene is ytkA

Identifier: 16080118

GI number: 16080118

Start: 3136938

End: 3137375

Strand: Reverse

Name: ytkA

Synonym: BSU30660

Alternate gene names: 16080118

Gene position: 3137375-3136938 (Counterclockwise)

Preceding gene: 16080119

Following gene: 16080117

Centisome position: 74.42

GC content: 43.84

Gene sequence:

>438_bases
ATGAAAAAGATGTTGGTTGTTCTGCTTTTTTCTGCTTTATTGCTTAATGGATGCGGATCTGGTGAAAGTAAAGCAAATAC
AGCTGAGACGCCCGAGGTTTTGGATGTCAAGCTGACCGGGCCTGAAAAAGTAAATCCCGGAGAAAGCGCTGCTTATGAAG
CAGCTGTATCATATGGTGATGAAGCTGTGACGGATGCCGATGAAGTAGAGTTTGAAGTATGGAAAGAAGGGGAAAAAGAC
GCAAGCCAAATGTTTAAGGTGAAACAAGAAAAAGGCGTATACCGATTGGAAACGACGTTTAAGGAAGATGGTGTATACAC
TGTCCAATCTCATGTCACAGCAAAAAAACAGCATAGCATGCCGACCTTAAAAGTCCAAGTCGGAGACGCCGATGCTGCCA
GCAATCAGTCAGAAGAGGAGCATTCACATCATCATTGA

Upstream 100 bases:

>100_bases
CGCTTAAGCAAAAAGGTCTTTTTTGTGACGTCTCATATTTTGTGTACCATTTGCTGTAAGCGTTTGCTACTATTTAGGTA
AACGATGAAAGGGTGATGGC

Downstream 100 bases:

>100_bases
TTGTGTGAATCAGAGTGATTTTCTTGTGGTGGATCAATGGTATGCTTTACATTATAGGCTTTTACAGTCGTCCAAATGGT
TACAAGCAAAACAGCCAGCA

Product: lipoprotein

Products: NA

Alternate protein names: PSPA8

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MKKMLVVLLFSALLLNGCGSGESKANTAETPEVLDVKLTGPEKVNPGESAAYEAAVSYGDEAVTDADEVEFEVWKEGEKD
ASQMFKVKQEKGVYRLETTFKEDGVYTVQSHVTAKKQHSMPTLKVQVGDADAASNQSEEEHSHHH

Sequences:

>Translated_145_residues
MKKMLVVLLFSALLLNGCGSGESKANTAETPEVLDVKLTGPEKVNPGESAAYEAAVSYGDEAVTDADEVEFEVWKEGEKD
ASQMFKVKQEKGVYRLETTFKEDGVYTVQSHVTAKKQHSMPTLKVQVGDADAASNQSEEEHSHHH
>Mature_145_residues
MKKMLVVLLFSALLLNGCGSGESKANTAETPEVLDVKLTGPEKVNPGESAAYEAAVSYGDEAVTDADEVEFEVWKEGEKD
ASQMFKVKQEKGVYRLETTFKEDGVYTVQSHVTAKKQHSMPTLKVQVGDADAASNQSEEEHSHHH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YTKA_BACSU (P40768)

Other databases:

- EMBL:   AF008220
- EMBL:   AL009126
- EMBL:   M22902
- PIR:   C69994
- RefSeq:   NP_390944.1
- EnsemblBacteria:   EBBACT00000002469
- GeneID:   937181
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU30660
- NMPDR:   fig|224308.1.peg.3069
- GenoList:   BSU30660
- GeneTree:   EBGT00050000002913
- HOGENOM:   HBG313673
- OMA:   DADEVEF
- ProtClustDB:   CLSK887763
- BioCyc:   BSUB:BSU30660-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15857; Mature: 15857

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKMLVVLLFSALLLNGCGSGESKANTAETPEVLDVKLTGPEKVNPGESAAYEAAVSYGD
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCC
EAVTDADEVEFEVWKEGEKDASQMFKVKQEKGVYRLETTFKEDGVYTVQSHVTAKKQHSM
HHCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEEEECCCCCEEEEHHHHHHHHHCCC
PTLKVQVGDADAASNQSEEEHSHHH
CEEEEEECCCCCCCCCCCCHHCCCC
>Mature Secondary Structure
MKKMLVVLLFSALLLNGCGSGESKANTAETPEVLDVKLTGPEKVNPGESAAYEAAVSYGD
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCC
EAVTDADEVEFEVWKEGEKDASQMFKVKQEKGVYRLETTFKEDGVYTVQSHVTAKKQHSM
HHCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEEEECCCCCEEEEHHHHHHHHHCCC
PTLKVQVGDADAASNQSEEEHSHHH
CEEEEEECCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377; 3145906