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The map label for this gene is dps

Identifier: 16080117

GI number: 16080117

Start: 3136238

End: 3136675

Strand: Reverse

Name: dps

Synonym: BSU30650

Alternate gene names: 16080117

Gene position: 3136675-3136238 (Counterclockwise)

Preceding gene: 16080118

Following gene: 16080116

Centisome position: 74.41

GC content: 39.95

Gene sequence:

>438_bases
ATGTCAGAACAATTGATTCAAGCAGTGAACAAACAAGTAGCCAACTGGACGGTCATGTATGTGAAACTACATAATTATCA
CTGGTATGTGAAAGGGAAAGATTTCTTCACTCTTCATGAAAAGTTTGAGGAGCTGTACAACGAAACAGCAACTTATATTG
ATGACTTAGCAGAACGTCTTTTGGCGCTGAACGGAAAACCGATTGCAACAATGAAGGAATCCTTAGAAACGGCTTCTGTC
AAAGAAGCTGCTGGAAATGAAACAGCTGAACAAATGGTTCAAAGCGTATATGATGATTTCACAGTCATCGCGGAAGAGCT
GAAAAACGGCATGGATTTAGCTGATGAAGTCGGTGACGAAACAACAGGGGACATGCTTCTTGCGATCCATCAAAATATTG
AAAAACATAACTGGATGCTAAAAGCTTACCTAGGTTAA

Upstream 100 bases:

>100_bases
TGTAGCATAATAGAAGAAATCGTGACAGATAAGGGTAAAAAAGAGGTTTTAGCGTACGATATTAAGGGTATACATAGTCA
TATAACAAGGAGGAGATACC

Downstream 100 bases:

>100_bases
GTTCAAAAATAGAACGGCCGGATGTCTTAAAAAAGACGTCCGGCTTTTCTTTTTGTATCTGAAAAATAGGCGACAACCAG
TCCATTTTTCTGAAAAATCC

Product: DNA-protecting protein, ferritin

Products: NA

Alternate protein names: GSP20U; DPS protein homolog

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MSEQLIQAVNKQVANWTVMYVKLHNYHWYVKGKDFFTLHEKFEELYNETATYIDDLAERLLALNGKPIATMKESLETASV
KEAAGNETAEQMVQSVYDDFTVIAEELKNGMDLADEVGDETTGDMLLAIHQNIEKHNWMLKAYLG

Sequences:

>Translated_145_residues
MSEQLIQAVNKQVANWTVMYVKLHNYHWYVKGKDFFTLHEKFEELYNETATYIDDLAERLLALNGKPIATMKESLETASV
KEAAGNETAEQMVQSVYDDFTVIAEELKNGMDLADEVGDETTGDMLLAIHQNIEKHNWMLKAYLG
>Mature_144_residues
SEQLIQAVNKQVANWTVMYVKLHNYHWYVKGKDFFTLHEKFEELYNETATYIDDLAERLLALNGKPIATMKESLETASVK
EAAGNETAEQMVQSVYDDFTVIAEELKNGMDLADEVGDETTGDMLLAIHQNIEKHNWMLKAYLG

Specific function: Unspecifically Binds And Protects DNA From Oxidative Damage Mediated By Hydrogen Peroxide. Iron-Storage Protein. [C]

COG id: COG0783

COG function: function code P; DNA-binding ferritin-like protein (oxidative damage protectant)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dps family

Homologues:

None

Paralogues:

None

Copy number: 6720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): G20U_BACSU (P80879)

Other databases:

- EMBL:   AF008220
- EMBL:   AL009126
- PIR:   H69618
- RefSeq:   NP_390943.1
- ProteinModelPortal:   P80879
- SMR:   P80879
- EnsemblBacteria:   EBBACT00000001352
- GeneID:   937211
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU30650
- NMPDR:   fig|224308.1.peg.3068
- GenoList:   BSU30650
- GeneTree:   EBGT00050000000974
- HOGENOM:   HBG672882
- OMA:   PLHAYSD
- ProtClustDB:   CLSK887762
- BioCyc:   BSUB:BSU30650-MONOMER
- InterPro:   IPR002177
- InterPro:   IPR023188
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR008331
- Gene3D:   G3DSA:1.20.1260.10
- PIRSF:   PIRSF005900
- PRINTS:   PR01346

Pfam domain/function: PF00210 Ferritin; SSF47240 Ferritin/RR_like

EC number: NA

Molecular weight: Translated: 16594; Mature: 16463

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: PS00818 DPS_1; PS00819 DPS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEQLIQAVNKQVANWTVMYVKLHNYHWYVKGKDFFTLHEKFEELYNETATYIDDLAERL
CCHHHHHHHHHHHHCEEEEEEEEECEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALNGKPIATMKESLETASVKEAAGNETAEQMVQSVYDDFTVIAEELKNGMDLADEVGDE
HHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCC
TTGDMLLAIHQNIEKHNWMLKAYLG
CCHHHHHHHHHHHHHHCCEEEEECC
>Mature Secondary Structure 
SEQLIQAVNKQVANWTVMYVKLHNYHWYVKGKDFFTLHEKFEELYNETATYIDDLAERL
CHHHHHHHHHHHHCEEEEEEEEECEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALNGKPIATMKESLETASVKEAAGNETAEQMVQSVYDDFTVIAEELKNGMDLADEVGDE
HHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCC
TTGDMLLAIHQNIEKHNWMLKAYLG
CCHHHHHHHHHHHHHHCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377; 9298659