Click here to switch to the map view.

The map label for this gene is ytaP

Identifier: 16080077

GI number: 16080077

Start: 3095665

End: 3096564

Strand: Reverse

Name: ytaP

Synonym: BSU30250

Alternate gene names: 16080077

Gene position: 3096564-3095665 (Counterclockwise)

Preceding gene: 255767695

Following gene: 255767694

Centisome position: 73.45

GC content: 48.22

Gene sequence:

>900_bases
ATGAGAGCCGAAAGAAGAAAGCAACTGTTTCGATTGCTTGGTGATTTGCCTGATCGGAGGCCAATCAGTGTTGAGACATT
ACGTATTGAAGAAAGAGAAGAAAATATCGTTGAAACGCTCCTGCTCGATTTAAATGGACATGAAAAGGCGCCCGCTTATT
TTGTGAAGCCGAAGAAAACAGAAGGACCGTGCCCAGCCGTATTGTTTCAGCATTCGCATGGAGGCCAGTATGATAGGGGA
AAAAGTGAGCTGATTGAGGGAGCGGATTATTTGAAAACGCCTTCTTTTTCTGATGAGCTTACTTCACTCGGATACGGCGT
TCTTGCGATTGATCATTGGGGGTTTGGAGATCGGCGGGGAAAAGCGGAAAGCGAGATATTTAAAGAAATGCTTCTCACCG
GAAAAGTGATGTGGGGGATGATGATTTATGACAGTTTAAGTGCGTTAGACTATATGCAGTCACGCTCTGATGTTCAGCCT
GACAGGATCGGAACCATCGGCATGTCTATGGGAGGTTTGATGGCGTGGTGGACAGCGGCGCTCGATGACCGGATTAAGGT
GTGTGTGGATTTGTGCAGCCAGGTGGATCATCACGTGCTGATCAAAACACAGAATCTTGACAGGCACGGCTTTTATTATT
ACGTCCCATCGCTTGCAAAGCATTTTTCCGCATCGGAGATCCAAAGCCTGATCGCGCCGCGCCCGCACCTTAGTCTTGTT
GGTGTACACGATCGGTTAACGCCGGCTGAGGGCGTGGACAAAATCGAAAAAGAATTGACAGCTGTCTATGCTGGACAGGG
AGCTGCTGATTGCTACCGAGTGGTCCGTTCTGCTTCGGGACATTTCGAAACAGCAGTTATAAGGCATGAAGCTGTCCGGT
TTTTGCAAAAGTGGCTGTGA

Upstream 100 bases:

>100_bases
CTAAATATTTAGTAAATGATGTGATTTATGTTGGAAAAATAAAGGGGAACCCAGATCTGTCTCGTAAATGTGAAGTAAGC
GAATAAGGAAGGGTGATGGG

Downstream 100 bases:

>100_bases
CTGTAAAAAGAAATCGAAAAAGACCGTTTTGTGTGAAAACGGTCTTTTTGTTTCCTTTTAACCAACTGCCATAAATCGAT
CCTTTCTTCTATTGACAGAA

Product: hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MRAERRKQLFRLLGDLPDRRPISVETLRIEEREENIVETLLLDLNGHEKAPAYFVKPKKTEGPCPAVLFQHSHGGQYDRG
KSELIEGADYLKTPSFSDELTSLGYGVLAIDHWGFGDRRGKAESEIFKEMLLTGKVMWGMMIYDSLSALDYMQSRSDVQP
DRIGTIGMSMGGLMAWWTAALDDRIKVCVDLCSQVDHHVLIKTQNLDRHGFYYYVPSLAKHFSASEIQSLIAPRPHLSLV
GVHDRLTPAEGVDKIEKELTAVYAGQGAADCYRVVRSASGHFETAVIRHEAVRFLQKWL

Sequences:

>Translated_299_residues
MRAERRKQLFRLLGDLPDRRPISVETLRIEEREENIVETLLLDLNGHEKAPAYFVKPKKTEGPCPAVLFQHSHGGQYDRG
KSELIEGADYLKTPSFSDELTSLGYGVLAIDHWGFGDRRGKAESEIFKEMLLTGKVMWGMMIYDSLSALDYMQSRSDVQP
DRIGTIGMSMGGLMAWWTAALDDRIKVCVDLCSQVDHHVLIKTQNLDRHGFYYYVPSLAKHFSASEIQSLIAPRPHLSLV
GVHDRLTPAEGVDKIEKELTAVYAGQGAADCYRVVRSASGHFETAVIRHEAVRFLQKWL
>Mature_299_residues
MRAERRKQLFRLLGDLPDRRPISVETLRIEEREENIVETLLLDLNGHEKAPAYFVKPKKTEGPCPAVLFQHSHGGQYDRG
KSELIEGADYLKTPSFSDELTSLGYGVLAIDHWGFGDRRGKAESEIFKEMLLTGKVMWGMMIYDSLSALDYMQSRSDVQP
DRIGTIGMSMGGLMAWWTAALDDRIKVCVDLCSQVDHHVLIKTQNLDRHGFYYYVPSLAKHFSASEIQSLIAPRPHLSLV
GVHDRLTPAEGVDKIEKELTAVYAGQGAADCYRVVRSASGHFETAVIRHEAVRFLQKWL

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dienelactone hydrolase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YTAP_BACSU (O34973)

Other databases:

- EMBL:   AF008220
- EMBL:   AL009126
- PIR:   B69988
- RefSeq:   NP_390903.1
- ProteinModelPortal:   O34973
- EnsemblBacteria:   EBBACT00000000848
- GeneID:   937263
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU30250
- NMPDR:   fig|224308.1.peg.3028
- GenoList:   BSU30250
- GeneTree:   EBGT00050000006163
- HOGENOM:   HBG345176
- OMA:   GQSAFYM
- ProtClustDB:   CLSK887749
- BioCyc:   BSUB:BSU30250-MONOMER
- GO:   GO:0006508
- InterPro:   IPR002925
- InterPro:   IPR002471

Pfam domain/function: PF01738 DLH

EC number: NA

Molecular weight: Translated: 33777; Mature: 33777

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS00708 PRO_ENDOPEP_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAERRKQLFRLLGDLPDRRPISVETLRIEEREENIVETLLLDLNGHEKAPAYFVKPKKT
CCHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCCCCEEEECCCCC
EGPCPAVLFQHSHGGQYDRGKSELIEGADYLKTPSFSDELTSLGYGVLAIDHWGFGDRRG
CCCCCEEEEECCCCCCCCCCHHHHHCCHHHHCCCCCHHHHHHCCCCEEEEECCCCCCCCC
KAESEIFKEMLLTGKVMWGMMIYDSLSALDYMQSRSDVQPDRIGTIGMSMGGLMAWWTAA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEHHHHHHHHHHHHHHH
LDDRIKVCVDLCSQVDHHVLIKTQNLDRHGFYYYVPSLAKHFSASEIQSLIAPRPHLSLV
HHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEHHHHHHHCCHHHHHHHHCCCCCEEEE
GVHDRLTPAEGVDKIEKELTAVYAGQGAADCYRVVRSASGHFETAVIRHEAVRFLQKWL
ECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRAERRKQLFRLLGDLPDRRPISVETLRIEEREENIVETLLLDLNGHEKAPAYFVKPKKT
CCHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCCCCEEEECCCCC
EGPCPAVLFQHSHGGQYDRGKSELIEGADYLKTPSFSDELTSLGYGVLAIDHWGFGDRRG
CCCCCEEEEECCCCCCCCCCHHHHHCCHHHHCCCCCHHHHHHCCCCEEEEECCCCCCCCC
KAESEIFKEMLLTGKVMWGMMIYDSLSALDYMQSRSDVQPDRIGTIGMSMGGLMAWWTAA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEHHHHHHHHHHHHHHH
LDDRIKVCVDLCSQVDHHVLIKTQNLDRHGFYYYVPSLAKHFSASEIQSLIAPRPHLSLV
HHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEHHHHHHHCCHHHHHHHHCCCCCEEEE
GVHDRLTPAEGVDKIEKELTAVYAGQGAADCYRVVRSASGHFETAVIRHEAVRFLQKWL
ECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377