BacMap

Definition	Bacillus subtilis subsp. subtilis str. 168 chromosome, complete genome.
Accession	NC_000964
Length	4,215,606

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The map label for this gene is ythP

Identifier: 16080053

GI number: 16080053

Start: 3071400

End: 3072110

Strand: Reverse

Name: ythP

Synonym: BSU30010

Alternate gene names: 16080053

Gene position: 3072110-3071400 (Counterclockwise)

Preceding gene: 255767687

Following gene: 16080052

Centisome position: 72.87

GC content: 45.85

Gene sequence:

>711_bases
TTGACAAATTTGCTTGAAGCTTCAATAGAACAGGCCGGGTATACAAGCCGAAAAAAAGTGCTCACCGATGTTTTTCTGGA
AGTCAGAAAAGGGGAACTGGTTGGACTGATCGGAGCTAACGGCGCAGGAAAAAGCACCGCAATCAAGGCGATACTCGGCC
TTTCAGAAGATTTTAAAGGGCATATTGCCTGGAACGACTGTTCATTTGCATATATTCCGGAGCATCCGTCCTTCTACGAA
GAACTGACGCTGTGGGAGCATTTGGATCTGATCAGCACACTTCACGGCATTGAAGAGAGTGAATTTGCGCATCGGGCCCA
AAGCCTGCTGCAGACGTTTTCGCTAGATCATGTCAAACATGAGCTGCCTGTCACCTTTTCGAAGGGCATGCAGCAAAAAC
TAATGCTTATCCAGGCCTTTCTCTCTAAGCCGGATATGTATGTGATTGATGAACCGTTTATCGGCCTTGATCCGATATCG
ACGAAACGCTTTGTGGACATGCTTAAGGCTGAAAAAGAACGTGGAGCCGGAATTCTTATGTGCACGCATGTACTCGATAC
CGCGGAAAAAATCTGTGACCGGTTTTATATGATTGAGAAAGGTTCATTATTTCTCCAAGGCACGTTAAAAGATGTTCAGG
ACAAGACCGGATTAGAGGGGCAGTCATTGCTTGACTGTTTTTATAAGGCAGTTCAAGGTGATCGGCTATGA

Upstream 100 bases:

>100_bases
CCATCCTTGTTGGATTACTATGTATTTCGGCTCAATATTATTATGGTTAAAGAAACTTTTTTTATTCTATTTCGTAGTAA
ATTTTGGAGGTGAGTGAGTT

Downstream 100 bases:

>100_bases
ACGGGCGTACGCTCTTTTTTCGAAGGCTGTTTGACTATTATAAGTATCAGTTTAAAGTGTTGCATGCGGTCATTGACTGG
ACAGTCGCTCTCTATATCGT

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MTNLLEASIEQAGYTSRKKVLTDVFLEVRKGELVGLIGANGAGKSTAIKAILGLSEDFKGHIAWNDCSFAYIPEHPSFYE
ELTLWEHLDLISTLHGIEESEFAHRAQSLLQTFSLDHVKHELPVTFSKGMQQKLMLIQAFLSKPDMYVIDEPFIGLDPIS
TKRFVDMLKAEKERGAGILMCTHVLDTAEKICDRFYMIEKGSLFLQGTLKDVQDKTGLEGQSLLDCFYKAVQGDRL

Sequences:

>Translated_236_residues
MTNLLEASIEQAGYTSRKKVLTDVFLEVRKGELVGLIGANGAGKSTAIKAILGLSEDFKGHIAWNDCSFAYIPEHPSFYE
ELTLWEHLDLISTLHGIEESEFAHRAQSLLQTFSLDHVKHELPVTFSKGMQQKLMLIQAFLSKPDMYVIDEPFIGLDPIS
TKRFVDMLKAEKERGAGILMCTHVLDTAEKICDRFYMIEKGSLFLQGTLKDVQDKTGLEGQSLLDCFYKAVQGDRL
>Mature_235_residues
TNLLEASIEQAGYTSRKKVLTDVFLEVRKGELVGLIGANGAGKSTAIKAILGLSEDFKGHIAWNDCSFAYIPEHPSFYEE
LTLWEHLDLISTLHGIEESEFAHRAQSLLQTFSLDHVKHELPVTFSKGMQQKLMLIQAFLSKPDMYVIDEPFIGLDPIST
KRFVDMLKAEKERGAGILMCTHVLDTAEKICDRFYMIEKGSLFLQGTLKDVQDKTGLEGQSLLDCFYKAVQGDRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain

Homologues:

Organism=Homo sapiens, GI153792144, Length=225, Percent_Identity=32, Blast_Score=119, Evalue=3e-27,
Organism=Homo sapiens, GI27436953, Length=220, Percent_Identity=29.0909090909091, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI27477115, Length=218, Percent_Identity=30.7339449541284, Blast_Score=103, Evalue=9e-23,
Organism=Homo sapiens, GI6005701, Length=225, Percent_Identity=31.1111111111111, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI31657092, Length=210, Percent_Identity=30, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI27262624, Length=217, Percent_Identity=30.4147465437788, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI27262626, Length=217, Percent_Identity=30.4147465437788, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI47078218, Length=213, Percent_Identity=29.1079812206573, Blast_Score=92, Evalue=4e-19,
Organism=Homo sapiens, GI45446740, Length=213, Percent_Identity=29.1079812206573, Blast_Score=92, Evalue=4e-19,
Organism=Homo sapiens, GI105990541, Length=201, Percent_Identity=27.8606965174129, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI116734710, Length=209, Percent_Identity=29.1866028708134, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI27881501, Length=214, Percent_Identity=25.2336448598131, Blast_Score=89, Evalue=2e-18,
Organism=Homo sapiens, GI150417984, Length=202, Percent_Identity=28.2178217821782, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI30795238, Length=214, Percent_Identity=25.2336448598131, Blast_Score=89, Evalue=4e-18,
Organism=Homo sapiens, GI21536376, Length=212, Percent_Identity=23.5849056603774, Blast_Score=84, Evalue=8e-17,
Organism=Homo sapiens, GI11967969, Length=218, Percent_Identity=23.394495412844, Blast_Score=64, Evalue=8e-11,
Organism=Escherichia coli, GI48994943, Length=222, Percent_Identity=30.1801801801802, Blast_Score=108, Evalue=2e-25,
Organism=Escherichia coli, GI1789593, Length=216, Percent_Identity=27.7777777777778, Blast_Score=107, Evalue=9e-25,
Organism=Escherichia coli, GI87081782, Length=213, Percent_Identity=29.1079812206573, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI87082268, Length=211, Percent_Identity=28.436018957346, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI1786398, Length=215, Percent_Identity=28.8372093023256, Blast_Score=91, Evalue=8e-20,
Organism=Escherichia coli, GI1786703, Length=208, Percent_Identity=29.8076923076923, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1786319, Length=225, Percent_Identity=26.6666666666667, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1787089, Length=208, Percent_Identity=26.4423076923077, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI48995001, Length=204, Percent_Identity=29.9019607843137, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1789032, Length=228, Percent_Identity=24.5614035087719, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1788761, Length=202, Percent_Identity=25.2475247524752, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1787029, Length=205, Percent_Identity=27.8048780487805, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1788225, Length=214, Percent_Identity=24.2990654205607, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1788165, Length=210, Percent_Identity=29.0476190476191, Blast_Score=77, Evalue=8e-16,
Organism=Escherichia coli, GI1787759, Length=228, Percent_Identity=25.4385964912281, Blast_Score=77, Evalue=8e-16,
Organism=Escherichia coli, GI1789891, Length=213, Percent_Identity=25.8215962441315, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1787370, Length=206, Percent_Identity=23.3009708737864, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1789864, Length=225, Percent_Identity=26.2222222222222, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1789672, Length=204, Percent_Identity=25, Blast_Score=74, Evalue=6e-15,
Organism=Escherichia coli, GI48994883, Length=218, Percent_Identity=24.7706422018349, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1790525, Length=214, Percent_Identity=27.1028037383178, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787105, Length=215, Percent_Identity=26.046511627907, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787164, Length=188, Percent_Identity=25.531914893617, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1788450, Length=205, Percent_Identity=22.9268292682927, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1787792, Length=203, Percent_Identity=23.1527093596059, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1787500, Length=215, Percent_Identity=25.5813953488372, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI87081791, Length=227, Percent_Identity=22.9074889867841, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1786253, Length=204, Percent_Identity=22.5490196078431, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1790467, Length=195, Percent_Identity=24.1025641025641, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI87081834, Length=195, Percent_Identity=23.0769230769231, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1788897, Length=207, Percent_Identity=23.6714975845411, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI87082267, Length=213, Percent_Identity=21.5962441314554, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI87081709, Length=204, Percent_Identity=23.0392156862745, Blast_Score=64, Evalue=6e-12,
Organism=Escherichia coli, GI1787712, Length=196, Percent_Identity=20.4081632653061, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1789873, Length=205, Percent_Identity=22.9268292682927, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI87082064, Length=196, Percent_Identity=25.5102040816327, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1786872, Length=200, Percent_Identity=27, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1790739, Length=213, Percent_Identity=23.943661971831, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1789751, Length=214, Percent_Identity=28.0373831775701, Blast_Score=62, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17510237, Length=245, Percent_Identity=29.7959183673469, Blast_Score=104, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI71983523, Length=216, Percent_Identity=29.1666666666667, Blast_Score=100, Evalue=9e-22,
Organism=Caenorhabditis elegans, GI71983510, Length=216, Percent_Identity=29.1666666666667, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI71983516, Length=216, Percent_Identity=29.1666666666667, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI115533608, Length=198, Percent_Identity=28.7878787878788, Blast_Score=91, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17565586, Length=212, Percent_Identity=22.6415094339623, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI193202878, Length=187, Percent_Identity=26.7379679144385, Blast_Score=64, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6321121, Length=205, Percent_Identity=27.3170731707317, Blast_Score=69, Evalue=8e-13,
Organism=Drosophila melanogaster, GI221512771, Length=202, Percent_Identity=27.7227722772277, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI28571209, Length=222, Percent_Identity=27.9279279279279, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24643674, Length=203, Percent_Identity=26.1083743842365, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24666092, Length=221, Percent_Identity=26.6968325791855, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24648314, Length=203, Percent_Identity=26.1083743842365, Blast_Score=81, Evalue=7e-16,
Organism=Drosophila melanogaster, GI28574150, Length=217, Percent_Identity=27.6497695852535, Blast_Score=78, Evalue=4e-15,
Organism=Drosophila melanogaster, GI116007328, Length=217, Percent_Identity=27.6497695852535, Blast_Score=78, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24662800, Length=196, Percent_Identity=26.0204081632653, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI85725262, Length=202, Percent_Identity=26.7326732673267, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28573571, Length=204, Percent_Identity=26.9607843137255, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24582014, Length=226, Percent_Identity=22.5663716814159, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24582012, Length=226, Percent_Identity=22.5663716814159, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI28573573, Length=204, Percent_Identity=26.9607843137255, Blast_Score=71, Evalue=5e-13,
Organism=Drosophila melanogaster, GI221500365, Length=217, Percent_Identity=26.7281105990783, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI116007184, Length=225, Percent_Identity=24.8888888888889, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24650853, Length=186, Percent_Identity=24.7311827956989, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24650855, Length=186, Percent_Identity=24.7311827956989, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI281362751, Length=186, Percent_Identity=24.7311827956989, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI281361582, Length=235, Percent_Identity=25.9574468085106, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YTHP_BACSU (O34977)

Other databases:

- EMBL:   AF008220
- EMBL:   AL009126
- PIR:   C69993
- RefSeq:   NP_390879.1
- ProteinModelPortal:   O34977
- SMR:   O34977
- EnsemblBacteria:   EBBACT00000002414
- GeneID:   937282
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU30010
- NMPDR:   fig|224308.1.peg.3004
- GenoList:   BSU30010
- GeneTree:   EBGT00070000031866
- HOGENOM:   HBG758042
- OMA:   RGAGILM
- ProtClustDB:   CLSK2518261
- BioCyc:   BSUB:BSU30010-MONOMER
- GO:   GO:0006810
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- SMART:   SM00382

Pfam domain/function: PF00005 ABC_tran

EC number: NA

Molecular weight: Translated: 26507; Mature: 26376

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: PS00211 ABC_TRANSPORTER_1; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNLLEASIEQAGYTSRKKVLTDVFLEVRKGELVGLIGANGAGKSTAIKAILGLSEDFKG
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCCCCC
HIAWNDCSFAYIPEHPSFYEELTLWEHLDLISTLHGIEESEFAHRAQSLLQTFSLDHVKH
CEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ELPVTFSKGMQQKLMLIQAFLSKPDMYVIDEPFIGLDPISTKRFVDMLKAEKERGAGILM
HCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEH
CTHVLDTAEKICDRFYMIEKGSLFLQGTLKDVQDKTGLEGQSLLDCFYKAVQGDRL
HHHHHHHHHHHHHHHHEEECCCEEEEHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TNLLEASIEQAGYTSRKKVLTDVFLEVRKGELVGLIGANGAGKSTAIKAILGLSEDFKG
CCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCCCCC
HIAWNDCSFAYIPEHPSFYEELTLWEHLDLISTLHGIEESEFAHRAQSLLQTFSLDHVKH
CEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ELPVTFSKGMQQKLMLIQAFLSKPDMYVIDEPFIGLDPISTKRFVDMLKAEKERGAGILM
HCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEH
CTHVLDTAEKICDRFYMIEKGSLFLQGTLKDVQDKTGLEGQSLLDCFYKAVQGDRL
HHHHHHHHHHHHHHHHEEECCCEEEEHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377