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The map label for this gene is ythQ

Identifier: 16080052

GI number: 16080052

Start: 3070246

End: 3071403

Strand: Reverse

Name: ythQ

Synonym: BSU30000

Alternate gene names: 16080052

Gene position: 3071403-3070246 (Counterclockwise)

Preceding gene: 16080053

Following gene: 16080050

Centisome position: 72.86

GC content: 41.97

Gene sequence:

>1158_bases
ATGAACGGGCGTACGCTCTTTTTTCGAAGGCTGTTTGACTATTATAAGTATCAGTTTAAAGTGTTGCATGCGGTCATTGA
CTGGACAGTCGCTCTCTATATCGTTTTGCCGGCGATTGCTTTTGTCATCTATCAGTATATTGATTTGATGAACGGAAGAG
GCCTTCTTTATGAGTGGTCTGAAGTGGCGGAATGGAGATGGCTGTATGCTGTGTGTGTGCTGATCATGTTTACAGGTTCG
ATTCGTACATTTTTAATGGAAGCGGACAAAGTGTTTTTGCTGCAAAAGAAGGAAATCATCTATCAGCTCAAACGGTATGC
GCTTTTGTATTCTTTTCTGGCCACGCTGGCTAAATGGCTGCTTCTCTTTTTCATTGTCCTTCCCTTGATCAGTCATTCTG
TTCTCATCACATTCGCAGAAAGCACTGCTCTATTGTGTTATTTGTTTGGCCTTCATATATTCTTTTTATCCTTAAAGCAA
GACAGGATCAGAAAGCCGCGCTCCATTTCGAGATGGATTGGCGATACCCTTGTCAGAGCTATTCTTTTTGCTGGTTCTGC
TATCCTGATTGTTTTTACTGAGCGGCACTTGCTTGCGCTTTTTGGCATTTTATTTTTGTTTTTCTCAGTTATCCGCAGTT
TGAAAAAGACAGCCTCGTTCACGGCTTTTGAAGCTGAGGTGACTGAAGAGAAAAAAAGCAGGCTTGCCCTTGCAGGACTT
GTGATGATGATGAGTCAGGAGGCGGGAATGCCAAAAGTAAAAGACAGGATGAGAAGAAAACCATTATTATACCGAAATTC
AAAAAGGATATTTAAAAGACGAACGATCTGCACAGGCTATAAGGAGTTGTTTTTTAAAGTTATGCTGAGGAATGGCGAGT
ATGCAAGGCAGATGTACATGCTACTGTCAGCTTTCACTGTTCTCATATTTGTTTCCCCAATTTGGCTGAAGGTGATTGCG
CTGCTGGTATACACAGGGGTTTGCCGTTATATCCTGACGCTTATTTTTGACAAGGTCATGGATGCCCCTTTTTTAATTGG
CACCGATAAGGAAAGTGATGAATATTATCGGGCCAGAAAAAGCTGTATCAACATCCTGCACTATGCGTTTGCCGCCTGTT
GTTTTTTAGCGGCCGCTGTCTCTTTATTGTTTACATAA

Upstream 100 bases:

>100_bases
TATTTCTCCAAGGCACGTTAAAAGATGTTCAGGACAAGACCGGATTAGAGGGGCAGTCATTGCTTGACTGTTTTTATAAG
GCAGTTCAAGGTGATCGGCT

Downstream 100 bases:

>100_bases
AAAACCCAAACGGCGACGTTTGGGTTTTTTGGTCTATCCTTATAAAATAAACAGCTGGATGAAAAACAGAATGGCGAAAA
CGATGACGAGCGGATGAATC

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MNGRTLFFRRLFDYYKYQFKVLHAVIDWTVALYIVLPAIAFVIYQYIDLMNGRGLLYEWSEVAEWRWLYAVCVLIMFTGS
IRTFLMEADKVFLLQKKEIIYQLKRYALLYSFLATLAKWLLLFFIVLPLISHSVLITFAESTALLCYLFGLHIFFLSLKQ
DRIRKPRSISRWIGDTLVRAILFAGSAILIVFTERHLLALFGILFLFFSVIRSLKKTASFTAFEAEVTEEKKSRLALAGL
VMMMSQEAGMPKVKDRMRRKPLLYRNSKRIFKRRTICTGYKELFFKVMLRNGEYARQMYMLLSAFTVLIFVSPIWLKVIA
LLVYTGVCRYILTLIFDKVMDAPFLIGTDKESDEYYRARKSCINILHYAFAACCFLAAAVSLLFT

Sequences:

>Translated_385_residues
MNGRTLFFRRLFDYYKYQFKVLHAVIDWTVALYIVLPAIAFVIYQYIDLMNGRGLLYEWSEVAEWRWLYAVCVLIMFTGS
IRTFLMEADKVFLLQKKEIIYQLKRYALLYSFLATLAKWLLLFFIVLPLISHSVLITFAESTALLCYLFGLHIFFLSLKQ
DRIRKPRSISRWIGDTLVRAILFAGSAILIVFTERHLLALFGILFLFFSVIRSLKKTASFTAFEAEVTEEKKSRLALAGL
VMMMSQEAGMPKVKDRMRRKPLLYRNSKRIFKRRTICTGYKELFFKVMLRNGEYARQMYMLLSAFTVLIFVSPIWLKVIA
LLVYTGVCRYILTLIFDKVMDAPFLIGTDKESDEYYRARKSCINILHYAFAACCFLAAAVSLLFT
>Mature_385_residues
MNGRTLFFRRLFDYYKYQFKVLHAVIDWTVALYIVLPAIAFVIYQYIDLMNGRGLLYEWSEVAEWRWLYAVCVLIMFTGS
IRTFLMEADKVFLLQKKEIIYQLKRYALLYSFLATLAKWLLLFFIVLPLISHSVLITFAESTALLCYLFGLHIFFLSLKQ
DRIRKPRSISRWIGDTLVRAILFAGSAILIVFTERHLLALFGILFLFFSVIRSLKKTASFTAFEAEVTEEKKSRLALAGL
VMMMSQEAGMPKVKDRMRRKPLLYRNSKRIFKRRTICTGYKELFFKVMLRNGEYARQMYMLLSAFTVLIFVSPIWLKVIA
LLVYTGVCRYILTLIFDKVMDAPFLIGTDKESDEYYRARKSCINILHYAFAACCFLAAAVSLLFT

Specific function: Unknown

COG id: COG4473

COG function: function code U; Predicted ABC-type exoprotein transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YTHQ_BACSU (O35029)

Other databases:

- EMBL:   AF008220
- EMBL:   AL009126
- PIR:   D69993
- RefSeq:   NP_390878.1
- ProteinModelPortal:   O35029
- EnsemblBacteria:   EBBACT00000000403
- GeneID:   937288
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU30000
- NMPDR:   fig|224308.1.peg.3003
- GenoList:   BSU30000
- GeneTree:   EBGT00050000002718
- HOGENOM:   HBG338239
- OMA:   ISRYARD
- ProtClustDB:   CLSK887738
- BioCyc:   BSUB:BSU30000-MONOMER
- InterPro:   IPR010288
- PIRSF:   PIRSF037259

Pfam domain/function: PF05975 EcsB

EC number: NA

Molecular weight: Translated: 45048; Mature: 45048

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x11a8202c)-; HASH(0xfd9ec8c)-; HASH(0x10a8499c)-; HASH(0x11c24730)-; HASH(0x11bf12d8)-; HASH(0x115bd104)-; HASH(0x11cb1968)-; HASH(0x115d39a4)-;

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGRTLFFRRLFDYYKYQFKVLHAVIDWTVALYIVLPAIAFVIYQYIDLMNGRGLLYEWS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHH
EVAEWRWLYAVCVLIMFTGSIRTFLMEADKVFLLQKKEIIYQLKRYALLYSFLATLAKWL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLFFIVLPLISHSVLITFAESTALLCYLFGLHIFFLSLKQDRIRKPRSISRWIGDTLVRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ILFAGSAILIVFTERHLLALFGILFLFFSVIRSLKKTASFTAFEAEVTEEKKSRLALAGL
HHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMMMSQEAGMPKVKDRMRRKPLLYRNSKRIFKRRTICTGYKELFFKVMLRNGEYARQMYM
HHHHHHCCCCCHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LLSAFTVLIFVSPIWLKVIALLVYTGVCRYILTLIFDKVMDAPFLIGTDKESDEYYRARK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHH
SCINILHYAFAACCFLAAAVSLLFT
HHHHHHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MNGRTLFFRRLFDYYKYQFKVLHAVIDWTVALYIVLPAIAFVIYQYIDLMNGRGLLYEWS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHH
EVAEWRWLYAVCVLIMFTGSIRTFLMEADKVFLLQKKEIIYQLKRYALLYSFLATLAKWL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLFFIVLPLISHSVLITFAESTALLCYLFGLHIFFLSLKQDRIRKPRSISRWIGDTLVRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ILFAGSAILIVFTERHLLALFGILFLFFSVIRSLKKTASFTAFEAEVTEEKKSRLALAGL
HHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMMMSQEAGMPKVKDRMRRKPLLYRNSKRIFKRRTICTGYKELFFKVMLRNGEYARQMYM
HHHHHHCCCCCHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LLSAFTVLIFVSPIWLKVIALLVYTGVCRYILTLIFDKVMDAPFLIGTDKESDEYYRARK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHH
SCINILHYAFAACCFLAAAVSLLFT
HHHHHHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377