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The map label for this gene is ytnP

Identifier: 16080041

GI number: 16080041

Start: 3058631

End: 3059401

Strand: Reverse

Name: ytnP

Synonym: BSU29890

Alternate gene names: 16080041

Gene position: 3059401-3058631 (Counterclockwise)

Preceding gene: 16080042

Following gene: 16080040

Centisome position: 72.57

GC content: 45.91

Gene sequence:

>771_bases
ATGTTCGGCGTTGTGCCAAAGCCGCTTTGGTCTAAAAAATATCCAGTCAATGAAAAAAACCAGATTGAACTAAGAACAGA
CCCTATTTTGATTCAAAAGGATGGGCTCAATATCATCATTGACGCCGGAATTGGGTACGGCAAGCTGACTGATAAACAAA
AACGAAACTATGGCGTGACACAAGAGTCGAATGTGAAACCCTCATTAGCTGCACTCGGATTAACGGTTGCCGATATAGAT
GTGATCGCAATGACACACCTTCATTTTGATCATGCATGCGGTTTAACGGAATATGAAGGTGAACGGCTCGTCTCTGTCTT
TCCGAATGCAGTGATTTATACATCAGCTGTTGAATGGGACGAAATGCGCCATCCGAATATCAGGTCGAAAAATACGTATT
GGAAAGAAAATTGGGAGGCTGTAGCTGGCCAAGTCAAAACCTTTGAAGACACCTTAACGATCACAGAGGGTATTACAATG
CATCACACCGGAGGCCATAGCGACGGACACAGTGTCCTGATATGCGAGGATGCGGGTGAAACTGCCGTACATATGGCAGA
TCTGATGCCGACACATGCCCACCGCAATCCGCTATGGGTGCTGGCTTACGATGATTATCCGATGACCTCTATCCCGCAAA
AGCAGAAATGGCAGGCGTTCGCAGCAGAAAAAGATGCTTGGTTTATTTTTTACCATGATGCCGAGTATCGCGCCCTTCAA
TGGGAGGAGGACGGAAGCATCAAAAAGTCAGTTAAGCGAATGAAGCGATAG

Upstream 100 bases:

>100_bases
ACCATGATGATAGGGGGGGGTGAAAATGGAAACAATGAAAATTGGAAACATCACGTTGACCTGGCTTGACGGAGGCGTGA
CGCATATGGACGGAGGCGCC

Downstream 100 bases:

>100_bases
CATATTTTTATGTTTACCCTGCATGTTTTCCGGCTAATAATGCAAACCTAGTACTATTATGCTCAGAAAGGAAGAGGCAG
GGTGAAACAATTCAGAGTAA

Product: metal-dependent hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MFGVVPKPLWSKKYPVNEKNQIELRTDPILIQKDGLNIIIDAGIGYGKLTDKQKRNYGVTQESNVKPSLAALGLTVADID
VIAMTHLHFDHACGLTEYEGERLVSVFPNAVIYTSAVEWDEMRHPNIRSKNTYWKENWEAVAGQVKTFEDTLTITEGITM
HHTGGHSDGHSVLICEDAGETAVHMADLMPTHAHRNPLWVLAYDDYPMTSIPQKQKWQAFAAEKDAWFIFYHDAEYRALQ
WEEDGSIKKSVKRMKR

Sequences:

>Translated_256_residues
MFGVVPKPLWSKKYPVNEKNQIELRTDPILIQKDGLNIIIDAGIGYGKLTDKQKRNYGVTQESNVKPSLAALGLTVADID
VIAMTHLHFDHACGLTEYEGERLVSVFPNAVIYTSAVEWDEMRHPNIRSKNTYWKENWEAVAGQVKTFEDTLTITEGITM
HHTGGHSDGHSVLICEDAGETAVHMADLMPTHAHRNPLWVLAYDDYPMTSIPQKQKWQAFAAEKDAWFIFYHDAEYRALQ
WEEDGSIKKSVKRMKR
>Mature_256_residues
MFGVVPKPLWSKKYPVNEKNQIELRTDPILIQKDGLNIIIDAGIGYGKLTDKQKRNYGVTQESNVKPSLAALGLTVADID
VIAMTHLHFDHACGLTEYEGERLVSVFPNAVIYTSAVEWDEMRHPNIRSKNTYWKENWEAVAGQVKTFEDTLTITEGITM
HHTGGHSDGHSVLICEDAGETAVHMADLMPTHAHRNPLWVLAYDDYPMTSIPQKQKWQAFAAEKDAWFIFYHDAEYRALQ
WEEDGSIKKSVKRMKR

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YTNP_BACSU (O34760)

Other databases:

- EMBL:   AF008220
- EMBL:   AL009126
- PIR:   G69997
- RefSeq:   NP_390867.1
- ProteinModelPortal:   O34760
- SMR:   O34760
- PhosSite:   O34760
- EnsemblBacteria:   EBBACT00000004028
- GeneID:   937981
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU29890
- NMPDR:   fig|224308.1.peg.2992
- GenoList:   BSU29890
- GeneTree:   EBGT00050000000393
- HOGENOM:   HBG314015
- OMA:   HPNIRSK
- ProtClustDB:   CLSK873558
- BioCyc:   BSUB:BSU29890-MONOMER
- InterPro:   IPR001279
- SMART:   SM00849

Pfam domain/function: PF00753 Lactamase_B

EC number: NA

Molecular weight: Translated: 29170; Mature: 29170

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGVVPKPLWSKKYPVNEKNQIELRTDPILIQKDGLNIIIDAGIGYGKLTDKQKRNYGVT
CCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCEEEEECCCCCCCCCCCHHHCCCCC
QESNVKPSLAALGLTVADIDVIAMTHLHFDHACGLTEYEGERLVSVFPNAVIYTSAVEWD
CCCCCCCCHHHHCEEEHHEEEEEEEEEEHHHHCCCCCCCCCEEEEECCCEEEEEEECCHH
EMRHPNIRSKNTYWKENWEAVAGQVKTFEDTLTITEGITMHHTGGHSDGHSVLICEDAGE
HCCCCCCCCCCCCCHHHHHHHHCCCEEHHHEEEEECCEEEEECCCCCCCCEEEEECCCCC
TAVHMADLMPTHAHRNPLWVLAYDDYPMTSIPQKQKWQAFAAEKDAWFIFYHDAEYRALQ
CEEHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCEEEEE
WEEDGSIKKSVKRMKR
ECCCCCHHHHHHHHCC
>Mature Secondary Structure
MFGVVPKPLWSKKYPVNEKNQIELRTDPILIQKDGLNIIIDAGIGYGKLTDKQKRNYGVT
CCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCEEEEECCCCCCCCCCCHHHCCCCC
QESNVKPSLAALGLTVADIDVIAMTHLHFDHACGLTEYEGERLVSVFPNAVIYTSAVEWD
CCCCCCCCHHHHCEEEHHEEEEEEEEEEHHHHCCCCCCCCCEEEEECCCEEEEEEECCHH
EMRHPNIRSKNTYWKENWEAVAGQVKTFEDTLTITEGITMHHTGGHSDGHSVLICEDAGE
HCCCCCCCCCCCCCHHHHHHHHCCCEEHHHEEEEECCEEEEECCCCCCCCEEEEECCCCC
TAVHMADLMPTHAHRNPLWVLAYDDYPMTSIPQKQKWQAFAAEKDAWFIFYHDAEYRALQ
CEEHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCEEEEE
WEEDGSIKKSVKRMKR
ECCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377