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The map label for this gene is ytpP

Identifier: 16080036

GI number: 16080036

Start: 3054188

End: 3054511

Strand: Reverse

Name: ytpP

Synonym: BSU29840

Alternate gene names: 16080036

Gene position: 3054511-3054188 (Counterclockwise)

Preceding gene: 16080038

Following gene: 16080035

Centisome position: 72.46

GC content: 40.12

Gene sequence:

>324_bases
ATGAAAAAAATTGAATCAACTCAAGAGCTGGAAAAAGCGGTAAAGGATGATTGGTCTGTATTTATGTTTTCGGCCGATTG
GTGCCCGGATTGCCGTTTTGTAGAGCCTTTCCTGCCTGAACTGGAAGCGAATTTCCCTGAATTCACCTACTACTACGTAG
ACCGTGACAAATTCATTGATACATGTGCAGAGTGGGAAATTTACGGAATCCCAAGCTTTGTGGTGTTTAATGAAGGAAAA
GAAGTAAATCGTTTTGTGAGCAAAGACCGCAAAACAAAAGAAGAAATTGAACAGTTTTTAACAGACTCTCTCGCTAAAGC
GTAA

Upstream 100 bases:

>100_bases
TTGCATATAAGTGGTTTTGCCTCAAGCAGTTTGGTATGATCCAAATGGACGAGTATCGATAAAAAACATGTAAGAACATA
AACAACTGGAGGGATATGAA

Downstream 100 bases:

>100_bases
AGGAGGACATCGGTTTGAAAATGACCTCAAGGAAGCTGTCAGATATACTGAAGCAGCGCCTTCAGCACGAGAATCGCTCC
TTTCTGTTTGACAGAGAAAA

Product: thiol-disulfide oxidoreductase with thiredoxin domain

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MKKIESTQELEKAVKDDWSVFMFSADWCPDCRFVEPFLPELEANFPEFTYYYVDRDKFIDTCAEWEIYGIPSFVVFNEGK
EVNRFVSKDRKTKEEIEQFLTDSLAKA

Sequences:

>Translated_107_residues
MKKIESTQELEKAVKDDWSVFMFSADWCPDCRFVEPFLPELEANFPEFTYYYVDRDKFIDTCAEWEIYGIPSFVVFNEGK
EVNRFVSKDRKTKEEIEQFLTDSLAKA
>Mature_107_residues
MKKIESTQELEKAVKDDWSVFMFSADWCPDCRFVEPFLPELEANFPEFTYYYVDRDKFIDTCAEWEIYGIPSFVVFNEGK
EVNRFVSKDRKTKEEIEQFLTDSLAKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YTPP_BACSU (O34357)

Other databases:

- EMBL:   AF008220
- EMBL:   AL009126
- PIR:   G69998
- RefSeq:   NP_390862.1
- HSSP:   P10599
- ProteinModelPortal:   O34357
- SMR:   O34357
- EnsemblBacteria:   EBBACT00000001784
- GeneID:   936697
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU29840
- NMPDR:   fig|224308.1.peg.2987
- GenoList:   BSU29840
- GeneTree:   EBGT00050000000764
- HOGENOM:   HBG493509
- OMA:   FSADWCP
- ProtClustDB:   CLSK887732
- BioCyc:   BSUB:BSU29840-MONOMER
- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR013766
- InterPro:   IPR012335
- Gene3D:   G3DSA:3.40.30.10
- PANTHER:   PTHR10438

Pfam domain/function: PF00085 Thioredoxin; SSF52833 Thiordxn-like_fd

EC number: NA

Molecular weight: Translated: 12747; Mature: 12747

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: PS00194 THIOREDOXIN_1; PS51352 THIOREDOXIN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIESTQELEKAVKDDWSVFMFSADWCPDCRFVEPFLPELEANFPEFTYYYVDRDKFID
CCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCEEEEEECCHHHHH
TCAEWEIYGIPSFVVFNEGKEVNRFVSKDRKTKEEIEQFLTDSLAKA
HHHCEEEECCCEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKIESTQELEKAVKDDWSVFMFSADWCPDCRFVEPFLPELEANFPEFTYYYVDRDKFID
CCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCEEEEEECCHHHHH
TCAEWEIYGIPSFVVFNEGKEVNRFVSKDRKTKEEIEQFLTDSLAKA
HHHCEEEECCCEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377