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The map label for this gene is ytoP

Identifier: 16080038

GI number: 16080038

Start: 3055247

End: 3056320

Strand: Reverse

Name: ytoP

Synonym: BSU29860

Alternate gene names: 16080038

Gene position: 3056320-3055247 (Counterclockwise)

Preceding gene: 16080040

Following gene: 16080036

Centisome position: 72.5

GC content: 48.04

Gene sequence:

>1074_bases
ATGAATCAAGAAACGAAAGCGCTTTTCCAAACACTGACGCAGCTTCCCGGCGCGCCGGGCAATGAGCATCAGGTTCGTGC
TTTTATGAAGCAGGAGCTAGCCAAATATGCAGATGACATCGTTCAGGACAGACTGGGAAGTGTTTTCGGAGTCAGACGAG
GCGCAGAGGACGCACCGAGAATTATGGTAGCCGGGCACATGGACGAAGTCGGCTTCATGGTGACATCCATTACAGACAAC
GGGCTGCTCAGATTCCAGACGCTCGGAGGCTGGTGGAGCCAAGTTTTGCTTGCGCAGCGGGTTGAAATTCAAACAGATAA
CGGGCCGGTTCCGGGTGTGATTTCAAGCATACCGCCGCATTTATTGACAGATGCGCAGCGAAACCGACCGATGGATATCA
AAAACATGATGATCGACATTGGAGCGGATGATAAGGAAGACGCCATCAAAATCGGCATTAGACCGGGACAGCAGATCGTG
CCTGTTTGTCCGTTTACGACGATGGCGAATGAAAAGAAAATTTTATCAAAAGCATGGGATAACAGATATGGATGCGGCTT
AAGCATTGAACTTCTGAAGGAATTACACGGTAAAGAGCTTCCGAATACACTCTATGCGGGTGCAACGGTTCAGGAAGAAG
TAGGGCTAAGGGGCGCGCAGACGGCTTCTCATATGATTAAACCGGACTTGTTTTTCGCCCTTGACGCCAGCCCGGCAAAC
GATATGAGCGGAGACAAAAATGAATTCGGCCAGCTTGGAAAAGGCTTTTTGCTGCGCATTCTTGACAGAACGACAGTCAT
GCATCGCGGAATGAGGGAATTCGTTCTTGATATGGCTGAAACGCATGATATTCCATATCAATATTTTGTATCCGGCGGGG
GAACAGACGCAGGCAAGGTTCATATTTCGAACAGCGGTGTGCCGTCAGCGGTTATCGGAATATGTTCCCGCTATATTCAT
ACAAACGCTACTATCATTCATATTGATGATTATGCTGCTGCTAAAGAAATGCTCATCAAACTTGTAACAGCCTGCGATAA
GCAGACAGTGGATGCGATTAAAGAAAATATGTAG

Upstream 100 bases:

>100_bases
TAAGCAATACGCGGCTGATCGAGCAGATTGGGTCAGAGTGCTTGGAAAACTTCATTGTTTCTAATAAAATAAAAGGACTA
CATAGAAATGAGGGGAAAAC

Downstream 100 bases:

>100_bases
GTTTCATAAAAGCTTGTTGAACGAGCAGTAAGCCCGGATCGACAAGCTTTTTTCTTATTCTGTTTCAAATAGATAGGAAA
GGGCCTTAATGGCTTGGTTA

Product: glutamyl aminopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MNQETKALFQTLTQLPGAPGNEHQVRAFMKQELAKYADDIVQDRLGSVFGVRRGAEDAPRIMVAGHMDEVGFMVTSITDN
GLLRFQTLGGWWSQVLLAQRVEIQTDNGPVPGVISSIPPHLLTDAQRNRPMDIKNMMIDIGADDKEDAIKIGIRPGQQIV
PVCPFTTMANEKKILSKAWDNRYGCGLSIELLKELHGKELPNTLYAGATVQEEVGLRGAQTASHMIKPDLFFALDASPAN
DMSGDKNEFGQLGKGFLLRILDRTTVMHRGMREFVLDMAETHDIPYQYFVSGGGTDAGKVHISNSGVPSAVIGICSRYIH
TNATIIHIDDYAAAKEMLIKLVTACDKQTVDAIKENM

Sequences:

>Translated_357_residues
MNQETKALFQTLTQLPGAPGNEHQVRAFMKQELAKYADDIVQDRLGSVFGVRRGAEDAPRIMVAGHMDEVGFMVTSITDN
GLLRFQTLGGWWSQVLLAQRVEIQTDNGPVPGVISSIPPHLLTDAQRNRPMDIKNMMIDIGADDKEDAIKIGIRPGQQIV
PVCPFTTMANEKKILSKAWDNRYGCGLSIELLKELHGKELPNTLYAGATVQEEVGLRGAQTASHMIKPDLFFALDASPAN
DMSGDKNEFGQLGKGFLLRILDRTTVMHRGMREFVLDMAETHDIPYQYFVSGGGTDAGKVHISNSGVPSAVIGICSRYIH
TNATIIHIDDYAAAKEMLIKLVTACDKQTVDAIKENM
>Mature_357_residues
MNQETKALFQTLTQLPGAPGNEHQVRAFMKQELAKYADDIVQDRLGSVFGVRRGAEDAPRIMVAGHMDEVGFMVTSITDN
GLLRFQTLGGWWSQVLLAQRVEIQTDNGPVPGVISSIPPHLLTDAQRNRPMDIKNMMIDIGADDKEDAIKIGIRPGQQIV
PVCPFTTMANEKKILSKAWDNRYGCGLSIELLKELHGKELPNTLYAGATVQEEVGLRGAQTASHMIKPDLFFALDASPAN
DMSGDKNEFGQLGKGFLLRILDRTTVMHRGMREFVLDMAETHDIPYQYFVSGGGTDAGKVHISNSGVPSAVIGICSRYIH
TNATIIHIDDYAAAKEMLIKLVTACDKQTVDAIKENM

Specific function: Unknown

COG id: COG1363

COG function: function code G; Cellulase M and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M42 family

Homologues:

Organism=Escherichia coli, GI1790332, Length=352, Percent_Identity=37.5, Blast_Score=234, Evalue=8e-63,
Organism=Escherichia coli, GI1788727, Length=347, Percent_Identity=31.9884726224784, Blast_Score=177, Evalue=1e-45,
Organism=Escherichia coli, GI87082417, Length=356, Percent_Identity=32.0224719101124, Blast_Score=157, Evalue=8e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YTOP_BACSU (O34924)

Other databases:

- EMBL:   AF008220
- EMBL:   AL009126
- PIR:   B69998
- RefSeq:   NP_390864.1
- HSSP:   Q9X0D9
- ProteinModelPortal:   O34924
- SMR:   O34924
- MEROPS:   M42.001
- EnsemblBacteria:   EBBACT00000003780
- GeneID:   937301
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU29860
- NMPDR:   fig|224308.1.peg.2989
- GenoList:   BSU29860
- GeneTree:   EBGT00050000001571
- HOGENOM:   HBG426188
- OMA:   CSRYIHT
- PhylomeDB:   O34924
- ProtClustDB:   CLSK873556
- BioCyc:   BSUB:BSU29860-MONOMER
- InterPro:   IPR008007
- PIRSF:   PIRSF001123

Pfam domain/function: PF05343 Peptidase_M42

EC number: NA

Molecular weight: Translated: 39238; Mature: 39238

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: ACT_SITE 212-212

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQETKALFQTLTQLPGAPGNEHQVRAFMKQELAKYADDIVQDRLGSVFGVRRGAEDAPR
CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
IMVAGHMDEVGFMVTSITDNGLLRFQTLGGWWSQVLLAQRVEIQTDNGPVPGVISSIPPH
EEEECCCCCCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHHEEECCCCCCCCHHHHCCCH
LLTDAQRNRPMDIKNMMIDIGADDKEDAIKIGIRPGQQIVPVCPFTTMANEKKILSKAWD
HHHHHHCCCCCCHHHHEEECCCCCCCCEEEEECCCCCCEEEECCCHHHCCHHHHHHHHHC
NRYGCGLSIELLKELHGKELPNTLYAGATVQEEVGLRGAQTASHMIKPDLFFALDASPAN
CCCCCCCHHHHHHHHHCCCCCCHHHCCCCHHHHHCCCCHHHHHHHCCCCEEEEECCCCCC
DMSGDKNEFGQLGKGFLLRILDRTTVMHRGMREFVLDMAETHDIPYQYFVSGGGTDAGKV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEE
HISNSGVPSAVIGICSRYIHTNATIIHIDDYAAAKEMLIKLVTACDKQTVDAIKENM
EECCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHCHHHHHHHHHCC
>Mature Secondary Structure
MNQETKALFQTLTQLPGAPGNEHQVRAFMKQELAKYADDIVQDRLGSVFGVRRGAEDAPR
CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
IMVAGHMDEVGFMVTSITDNGLLRFQTLGGWWSQVLLAQRVEIQTDNGPVPGVISSIPPH
EEEECCCCCCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHHEEECCCCCCCCHHHHCCCH
LLTDAQRNRPMDIKNMMIDIGADDKEDAIKIGIRPGQQIVPVCPFTTMANEKKILSKAWD
HHHHHHCCCCCCHHHHEEECCCCCCCCEEEEECCCCCCEEEECCCHHHCCHHHHHHHHHC
NRYGCGLSIELLKELHGKELPNTLYAGATVQEEVGLRGAQTASHMIKPDLFFALDASPAN
CCCCCCCHHHHHHHHHCCCCCCHHHCCCCHHHHHCCCCHHHHHHHCCCCEEEEECCCCCC
DMSGDKNEFGQLGKGFLLRILDRTTVMHRGMREFVLDMAETHDIPYQYFVSGGGTDAGKV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEE
HISNSGVPSAVIGICSRYIHTNATIIHIDDYAAAKEMLIKLVTACDKQTVDAIKENM
EECCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377