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The map label for this gene is ytpQ

Identifier: 16080035

GI number: 16080035

Start: 3053364

End: 3054173

Strand: Reverse

Name: ytpQ

Synonym: BSU29830

Alternate gene names: 16080035

Gene position: 3054173-3053364 (Counterclockwise)

Preceding gene: 16080036

Following gene: 16080034

Centisome position: 72.45

GC content: 47.16

Gene sequence:

>810_bases
TTGAAAATGACCTCAAGGAAGCTGTCAGATATACTGAAGCAGCGCCTTCAGCACGAGAATCGCTCCTTTCTGTTTGACAG
AGAAAAAGACACCCTCCGTGTTGAGGATCAAACGACTAAAAAAGGGATTACACTCGATTTGCCGCCGATTATTGCAAAAT
GGGAACTGAAAAAAGACGAAGCCATTGATGAGATCGTGTACTATGTCTCCGAAGCGATGACGGCAATGGAAGGGAAGGCT
CAGGAAATGACCGGGAAAGAAACTCGCATTTATCCGGTCATCCGCTCGACTTCCTTCCCGGACAAGTCCAGCGAAGATAT
CCCGCTCATTTATGACGATCATACCGCAGAGACAAGAATTTATTACGCGCTAGATCTCGGGAAAACCTACCGTTTAATTG
ACCAGCGCATGCTTGAGAAAGAAAACTGGACAAAAGAGCGGATCAGAGAGACGGCCGCATTTAATCTCCGTTCCCTGCCG
ACGGTTGTCAAAGAGGATACGGTTGCCGGCAATTACTTTTATTTCTTCAGGGCAAACGACGGATACGACGCAAGCCGGAT
TTTGAACGAAGCGATCTTAAATGAGTATAAGCAGCATGCAGAAGGTGAGCTGGCGATCTCTGTTCCTCATCAGGACGTTT
TGATTCTTGCTGACATCCGGAATGAATCGGGGTATGATATTCTAGGACAAATGTCGATGAGCTTCTTTGCAGGCGGCACC
GTCCCGATTACCGCCCTATCATTTTTGTACAATGAAGGAAAGCTGGAACCGGTGTTTATCCTGGCGAAAAGCCGTCCGAA
AAAGGATTAG

Upstream 100 bases:

>100_bases
AAGAAGTAAATCGTTTTGTGAGCAAAGACCGCAAAACAAAAGAAGAAATTGAACAGTTTTTAACAGACTCTCTCGCTAAA
GCGTAAAGGAGGACATCGGT

Downstream 100 bases:

>100_bases
AAAGGATTTTTACTTATGAACGCTTTTTATAATAAAGAAGGTGTGGGAGACACGCTCCTGATCTCTCTTCAAGATGTGAC
ACGCGAACAATTAGGCTATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MKMTSRKLSDILKQRLQHENRSFLFDREKDTLRVEDQTTKKGITLDLPPIIAKWELKKDEAIDEIVYYVSEAMTAMEGKA
QEMTGKETRIYPVIRSTSFPDKSSEDIPLIYDDHTAETRIYYALDLGKTYRLIDQRMLEKENWTKERIRETAAFNLRSLP
TVVKEDTVAGNYFYFFRANDGYDASRILNEAILNEYKQHAEGELAISVPHQDVLILADIRNESGYDILGQMSMSFFAGGT
VPITALSFLYNEGKLEPVFILAKSRPKKD

Sequences:

>Translated_269_residues
MKMTSRKLSDILKQRLQHENRSFLFDREKDTLRVEDQTTKKGITLDLPPIIAKWELKKDEAIDEIVYYVSEAMTAMEGKA
QEMTGKETRIYPVIRSTSFPDKSSEDIPLIYDDHTAETRIYYALDLGKTYRLIDQRMLEKENWTKERIRETAAFNLRSLP
TVVKEDTVAGNYFYFFRANDGYDASRILNEAILNEYKQHAEGELAISVPHQDVLILADIRNESGYDILGQMSMSFFAGGT
VPITALSFLYNEGKLEPVFILAKSRPKKD
>Mature_269_residues
MKMTSRKLSDILKQRLQHENRSFLFDREKDTLRVEDQTTKKGITLDLPPIIAKWELKKDEAIDEIVYYVSEAMTAMEGKA
QEMTGKETRIYPVIRSTSFPDKSSEDIPLIYDDHTAETRIYYALDLGKTYRLIDQRMLEKENWTKERIRETAAFNLRSLP
TVVKEDTVAGNYFYFFRANDGYDASRILNEAILNEYKQHAEGELAISVPHQDVLILADIRNESGYDILGQMSMSFFAGGT
VPITALSFLYNEGKLEPVFILAKSRPKKD

Specific function: Unknown

COG id: COG4848

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0354 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YTPQ_BACSU (O34496)

Other databases:

- EMBL:   AF008220
- EMBL:   AL009126
- PIR:   H69998
- RefSeq:   NP_390861.1
- ProteinModelPortal:   O34496
- EnsemblBacteria:   EBBACT00000003416
- GeneID:   937506
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU29830
- NMPDR:   fig|224308.1.peg.2986
- GenoList:   BSU29830
- GeneTree:   EBGT00050000002339
- HOGENOM:   HBG314016
- OMA:   IYPVIRS
- ProtClustDB:   PRK13668
- BioCyc:   BSUB:BSU29830-MONOMER
- HAMAP:   MF_01548
- InterPro:   IPR010838
- PIRSF:   PIRSF012562

Pfam domain/function: PF07285 DUF1444

EC number: NA

Molecular weight: Translated: 31044; Mature: 31044

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMTSRKLSDILKQRLQHENRSFLFDREKDTLRVEDQTTKKGITLDLPPIIAKWELKKDE
CCCCHHHHHHHHHHHHHCCCCCEEEECCCCCEEECCCCCCCCEEEECCCCEEEEECCCHH
AIDEIVYYVSEAMTAMEGKAQEMTGKETRIYPVIRSTSFPDKSSEDIPLIYDDHTAETRI
HHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEECCCCCCEEE
YYALDLGKTYRLIDQRMLEKENWTKERIRETAAFNLRSLPTVVKEDTVAGNYFYFFRAND
EEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHCCHHHHCCCEECCEEEEEECCC
GYDASRILNEAILNEYKQHAEGELAISVPHQDVLILADIRNESGYDILGQMSMSFFAGGT
CCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCC
VPITALSFLYNEGKLEPVFILAKSRPKKD
HHHHHHHHHHCCCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MKMTSRKLSDILKQRLQHENRSFLFDREKDTLRVEDQTTKKGITLDLPPIIAKWELKKDE
CCCCHHHHHHHHHHHHHCCCCCEEEECCCCCEEECCCCCCCCEEEECCCCEEEEECCCHH
AIDEIVYYVSEAMTAMEGKAQEMTGKETRIYPVIRSTSFPDKSSEDIPLIYDDHTAETRI
HHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEECCCCCCEEE
YYALDLGKTYRLIDQRMLEKENWTKERIRETAAFNLRSLPTVVKEDTVAGNYFYFFRAND
EEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHCCHHHHCCCEECCEEEEEECCC
GYDASRILNEAILNEYKQHAEGELAISVPHQDVLILADIRNESGYDILGQMSMSFFAGGT
CCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCC
VPITALSFLYNEGKLEPVFILAKSRPKKD
HHHHHHHHHHCCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377