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The map label for this gene is ytxD

Identifier: 16080025

GI number: 16080025

Start: 3043284

End: 3044102

Strand: Reverse

Name: ytxD

Synonym: BSU29730

Alternate gene names: 16080025

Gene position: 3044102-3043284 (Counterclockwise)

Preceding gene: 16080026

Following gene: 16080024

Centisome position: 72.21

GC content: 45.67

Gene sequence:

>819_bases
ATGAAACGTTTTGATTATCTTACACCTGTTGGATTTGTGTTAGGAACGATTATTATTGTTATCGGGATTATTTCAGGATC
GGGAGTAAGCGGTTTCCGCTCTTTTCTTGATCTGACCTCTTTCTTCATCGTAACAGGGGGACTTTGCGCCGCTGTTTTTA
TCAGTTTTCCGCCAAGTGAGCTGAAAAAAGCGCCCTCTGTGTTAAAGCAGGCATTCATCCGCCAGGAAGACAATGTGAAA
GATCTTGTGAAAACCTTTGTTTCCCTTTCCGATCACGCGCGAAAACACGGGCTTTTATCATTGGATGATCAGGCTCGGGA
AATCAAAGATCCATTCTTGAAAAAAGGGCTGCTTTTAGCGATTGACGGCTGGGATGAAGAAACGATTCGGCTCGTCATGG
ATTCAGAAATCGCAGCAATGGAGGAACGGCACCGAAAAGGGCGGCGAGTTTTTGAAAAAGCGGGAGAATTCGCTCCGGCA
TGGGGAATGATCGGAACACTCGTCGGGCTTGTGCTGATGCTCAAAAACTTAAACGACCCGCATATGCTCGGACCAAACAT
GGCCATTGCGCTTCTGACGACTTTATATGGTTCATTACTGGCAAATATGGTCTTCAACCCGATCGCGGCTAAGCTTGAAG
AGAAAACAGAAAGTGAAATTTTCATCAAGCAGGTAATGGTGGAAGGGATTATCGGTGTTCAATCCGGAAAAAACCCGCGC
AACCTTGAAAGCCAGCTGGTCGTTTTCAGCTCACGGGAAGAATGGCAGAAGCAGCCAAAACAAGTAAAAACAAAAAAGGG
ATCTGTACATGAAGCTTAG

Upstream 100 bases:

>100_bases
CGCACCGTATAGAGCTTAGAAAGTCAACCAAGTCATAAGAAAAACAAAGAGCAAGCTTCACCTTTATGGTGAATTCTTGC
TTTTTTCATGGGGAGAAATG

Downstream 100 bases:

>100_bases
AAGAGAACGTTTTGAAAGAAGGAATGGAAGCGGAAAAAACAGTCAATCTTCATCCAGCTGGATGGTAACCTTTACAGATC
TGATCACCTTGATCCTTGTG

Product: flagellar motor protein MotP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MKRFDYLTPVGFVLGTIIIVIGIISGSGVSGFRSFLDLTSFFIVTGGLCAAVFISFPPSELKKAPSVLKQAFIRQEDNVK
DLVKTFVSLSDHARKHGLLSLDDQAREIKDPFLKKGLLLAIDGWDEETIRLVMDSEIAAMEERHRKGRRVFEKAGEFAPA
WGMIGTLVGLVLMLKNLNDPHMLGPNMAIALLTTLYGSLLANMVFNPIAAKLEEKTESEIFIKQVMVEGIIGVQSGKNPR
NLESQLVVFSSREEWQKQPKQVKTKKGSVHEA

Sequences:

>Translated_272_residues
MKRFDYLTPVGFVLGTIIIVIGIISGSGVSGFRSFLDLTSFFIVTGGLCAAVFISFPPSELKKAPSVLKQAFIRQEDNVK
DLVKTFVSLSDHARKHGLLSLDDQAREIKDPFLKKGLLLAIDGWDEETIRLVMDSEIAAMEERHRKGRRVFEKAGEFAPA
WGMIGTLVGLVLMLKNLNDPHMLGPNMAIALLTTLYGSLLANMVFNPIAAKLEEKTESEIFIKQVMVEGIIGVQSGKNPR
NLESQLVVFSSREEWQKQPKQVKTKKGSVHEA
>Mature_272_residues
MKRFDYLTPVGFVLGTIIIVIGIISGSGVSGFRSFLDLTSFFIVTGGLCAAVFISFPPSELKKAPSVLKQAFIRQEDNVK
DLVKTFVSLSDHARKHGLLSLDDQAREIKDPFLKKGLLLAIDGWDEETIRLVMDSEIAAMEERHRKGRRVFEKAGEFAPA
WGMIGTLVGLVLMLKNLNDPHMLGPNMAIALLTTLYGSLLANMVFNPIAAKLEEKTESEIFIKQVMVEGIIGVQSGKNPR
NLESQLVVFSSREEWQKQPKQVKTKKGSVHEA

Specific function: May be involved in some transport function

COG id: COG1291

COG function: function code N; Flagellar motor component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MotA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YTXD_BACSU (P39063)

Other databases:

- EMBL:   L17309
- EMBL:   AF008220
- EMBL:   AL009126
- PIR:   S39641
- RefSeq:   NP_390851.1
- EnsemblBacteria:   EBBACT00000003575
- GeneID:   937317
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU29730
- NMPDR:   fig|224308.1.peg.2976
- GenoList:   BSU29730
- GeneTree:   EBGT00050000001089
- HOGENOM:   HBG691813
- OMA:   ADKLHGK
- ProtClustDB:   PRK06926
- BioCyc:   BSUB:BSU29730-MONOMER
- GO:   GO:0006935
- InterPro:   IPR000540
- InterPro:   IPR002898

Pfam domain/function: PF01618 MotA_ExbB

EC number: NA

Molecular weight: Translated: 30144; Mature: 30144

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: PS01307 MOTA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x11a9b9b8)-; HASH(0xf6a3a40)-; HASH(0x108facf0)-; HASH(0x11909c2c)-;

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHHHEEEECCHHHHHHHHHHHHHCCCCCCCH
>Mature Secondary Structure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CHHHHEEEECCHHHHHHHHHHHHHCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934817; 9387221; 9384377