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The map label for this gene is nrdR

Identifier: 16079952

GI number: 16079952

Start: 2965681

End: 2966139

Strand: Reverse

Name: nrdR

Synonym: BSU29000

Alternate gene names: 16079952

Gene position: 2966139-2965681 (Counterclockwise)

Preceding gene: 255767669

Following gene: 16079951

Centisome position: 70.36

GC content: 46.19

Gene sequence:

>459_bases
TTGAAATGTCCTTCATGCCAGCATAACGGAACACGAGTCCTTGATTCACGGCCTGTGGATGACGGAAAGTCGATTCGCCG
AAGACGCGAGTGCGAATCCTGCCACTACCGGTTTACGACCTTTGAGAAAGTGGAGGAAACCCCGCTCATCGTTGTGAAAA
AAGAAGGTGTGCGTGAGGAATTCAGCAGAGAAAAAATGCTGCGCGGCCTCATAAAAGCATGTGAAAAAAGGCCTGTTTCA
CTCAAAACGCTTGAAGACATGTGCTTTGATATTGAAAAAGAACTTCGCAATCAAGGCTGCTCCGAGGTGAAGAGTGAGCT
CGTCGGAGAAATGGTCATGGACCGGCTGGCTAAGATTGACGAAGTCGCATATGTGCGGTTCGCGTCCGTCTATCGGCAGT
TTAAAGATATAAACGTCTTTATCGATGAATTAAAAGACTTAATAAAGAAAGAGCGTTAA

Upstream 100 bases:

>100_bases
AACAACGGCTCTCCCGACAGATGCTGTCACATCTATTTTTAAAAGGCGGAGGCTGCCGAAAATACATTGCAGGGAACGAT
ATAGTTGGGAGCTGATTTTA

Downstream 100 bases:

>100_bases
AAGAGCTAAGAGGATTCTTCTAGCTCTTTTCTCATGTGCAAAATTGGCATTTGATAGATATAAGAAACGGTGTAAAATGA
AAGGTAGAAACAAATTCGGA

Product: transcriptional regulator NrdR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MKCPSCQHNGTRVLDSRPVDDGKSIRRRRECESCHYRFTTFEKVEETPLIVVKKEGVREEFSREKMLRGLIKACEKRPVS
LKTLEDMCFDIEKELRNQGCSEVKSELVGEMVMDRLAKIDEVAYVRFASVYRQFKDINVFIDELKDLIKKER

Sequences:

>Translated_152_residues
MKCPSCQHNGTRVLDSRPVDDGKSIRRRRECESCHYRFTTFEKVEETPLIVVKKEGVREEFSREKMLRGLIKACEKRPVS
LKTLEDMCFDIEKELRNQGCSEVKSELVGEMVMDRLAKIDEVAYVRFASVYRQFKDINVFIDELKDLIKKER
>Mature_152_residues
MKCPSCQHNGTRVLDSRPVDDGKSIRRRRECESCHYRFTTFEKVEETPLIVVKKEGVREEFSREKMLRGLIKACEKRPVS
LKTLEDMCFDIEKELRNQGCSEVKSELVGEMVMDRLAKIDEVAYVRFASVYRQFKDINVFIDELKDLIKKER

Specific function: Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes [H]

COG id: COG1327

COG function: function code K; Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-cone domain [H]

Homologues:

Organism=Escherichia coli, GI1786615, Length=147, Percent_Identity=48.9795918367347, Blast_Score=135, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005144
- InterPro:   IPR003796 [H]

Pfam domain/function: PF03477 ATP-cone [H]

EC number: NA

Molecular weight: Translated: 17913; Mature: 17913

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: PS51161 ATP_CONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCPSCQHNGTRVLDSRPVDDGKSIRRRRECESCHYRFTTFEKVEETPLIVVKKEGVREE
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHH
FSREKMLRGLIKACEKRPVSLKTLEDMCFDIEKELRNQGCSEVKSELVGEMVMDRLAKID
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
EVAYVRFASVYRQFKDINVFIDELKDLIKKER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKCPSCQHNGTRVLDSRPVDDGKSIRRRRECESCHYRFTTFEKVEETPLIVVKKEGVREE
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHH
FSREKMLRGLIKACEKRPVSLKTLEDMCFDIEKELRNQGCSEVKSELVGEMVMDRLAKID
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
EVAYVRFASVYRQFKDINVFIDELKDLIKKER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA