| Definition | Bacillus subtilis subsp. subtilis str. 168 chromosome, complete genome. |
|---|---|
| Accession | NC_000964 |
| Length | 4,215,606 |
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The map label for this gene is pheT
Identifier: 16079915
GI number: 16079915
Start: 2927008
End: 2929422
Strand: Reverse
Name: pheT
Synonym: BSU28630
Alternate gene names: 16079915
Gene position: 2929422-2927008 (Counterclockwise)
Preceding gene: 16079916
Following gene: 16079913
Centisome position: 69.49
GC content: 46.87
Gene sequence:
>2415_bases ATGTTTGTTTCTTATAAATGGTTAGAGGATTATGTTGATTTAAAAGGCATGGACCCGGCTGTTCTTGCTGAAAAAATTAC AAGAGCCGGTATTGAGGTTGAAGGAATTGAATACAAAGGAGAAGGCATCAAAGGCGTTGTCATCGGCCATGTGCTGGAGC GCGAGCAGCACCCGAATGCTGATAAGCTGAATAAGTGCCTTGTGGATATCGGAGCTGAAGCCCCTGTACAAATCATTTGC GGCGCGCCGAATGTGGATAAGGGACAAAAAGTCGCAGTTGCAACAGTCGGAGCGGTGCTGCCGGGCAATTTCAAAATCAA AAAAGCCAAGCTTCGCGGTGAAGAATCAAACGGCATGATCTGTTCCTTACAGGAGCTTGGTATCGAAAGCAAACTTGTGG CGAAGGAGTATGCAGAAGGCATTTTCGTATTCCCGAATGACGCTGAAACAGGAAGCGATGCCTTAGCGGCTTTACAGCTT GACGATGCGATTCTTGAGCTGGGTTTAACGCCAAACCGCGCGGATGCCATGAACATGCTTGGTGTTGCTTACGAGGTTGC GGCGATTTTAGACACTGAGGTAAAGCTTCCGCAAACGGATTACCCGGCTGCTTCAGAACAAGCGTCTGATTACATTTCAG TCAAAATTGAAGATCAAGAAGCGAACCCGCTGTACACTGCAAAAATCATTAAAAATGTCACGATTGCTCCGTCACCGCTT TGGATGCAGACAAAGCTGATGAATGCAGGCATTCGTCCGCACAACAACGTCGTTGACATCACAAATTTTGTCCTGTTGGA ATACGGACAGCCGCTTCATGCGTTTGATTATGACAGATTTGGCTCTAAGGAAGTCGTAGTAAGAAAAGCAGCTGAGAATG AAATGATCGTAACACTTGATGATCAAGAACGTAAGCTGTCTGCCGATCACCTTGTCATTACAAACGGAACGAAAGCGCAG GCCGTTGCCGGTGTCATGGGAGGAGCAGAGTCAGAGGTTCAGGAAGATACGAAAACCATTTTGCTTGAGGCTGCGTATTT CAACGGGCAGAAGGTTCGCAAGGCTTCCAAAGACCTTGGTTTGAGAAGTGAATCAAGCGTAAGATTTGAAAAAGGAATTG ATCCGGCACGCGTACGTCTTGCAGCAGAACGGGCTGCGCAGCTGATCCATCTGTATGCCGGCGGTGAGGTGCTTGCTGGA ACGGTTGAGGAAGATCACCTGACAATCGAAGCAAATAACATTCACGTATCTGCTGACAAAGTGAGCAGCGTTCTAGGCCT GACGATCAGTAAAGAAGAACTGATCAGCATTTATAAACGTCTCGGTTTTACGGTCGGTGAAGCGGATGATCTTCTCGTTG TGACTGTCCCATCACGGCGCGGTGACATTACAATAGAAGAGGATTTAATCGAAGAAGCGGCAAGACTGTACGGCTACGAT AACATTCCGTCTACGCTTCCTGAGACAGCGGGAACTACAGGCGGATTAACGCCATATCAGGCAAAACGCCGTAAAGTCAG ACGCTTCCTTGAAGGCGCAGGCTTATCACAAGCCATCACTTACTCACTGACAAACGAGAAGAAAGCGACAGCGTTTGCGA TTGAAAAATCACTGAATACTGTGCTTGCGCTTCCAATGAGTGAAGAAAGAAGCATTCTCAGACACAGTCTTGTTCCAAAT CTGCTTGATTCTGTTTCTTACAATCTTGCGAGGCAGACTGACTCAGTTGCACTGTACGAAGTTGGCTCCGTTTTCCTAAC GAAGGAAGAGGACACAAAACCTGTTGAAACAGAACGCGTAGCAGGAGCTGTTACCGGATTATGGCGCAAGCAGCTATGGC AGGGTGAAAAGAAACCAGTTGATTTCTTTGTTGTCAAAGGAATTGTGGAAGGGCTGTTAGACAAACTCAACGTCCTAGAC AGCATTGAATTTGTACAGTCTGAACGCAAACAGCTGCATCCGGGCAGAACAGCGAACATTTTATTGAATGGTTCTCTGAT CGGCTTCATCGGCCAAGTCCATCCTTCATTGGAAAAAGAACTGGATATAAAGGAAACATACGTATTTGAGCTCGATCTTC ATGCGTTGCTCGCAGCAGAAACAGCACCGCTTGTTTACACGGCGATTCCAAAATATCCGTCTGTGACACGTGATATCGCT CTTGTAACAGATAAAACCGTCACAAGCGGACAGCTCGAGAGCGTCATTAAAGAGGCCGGGGGCAAGCTTCTGAAAGAGGT AACCGTATTTGACGTATACGAAGGAGAGCATATGGAGGAAGGCAAGAAGTCAGTCGCTTTCTCACTCCAGTATGTCAATC CTGAACAAACACTGACTGAAGAAGAAGTGACAAAGGCGCACAGCAAAGTGCTGAAAGCGTTAGAAGACACATATCAAGCT GTTTTAAGAGGCTGA
Upstream 100 bases:
>100_bases CGCGATGCTGAAATATGGCATTGATGATATCCGCCACTTCTATACAAACGATGTCAGATTTATTTCGCAGTTTAAACAGG CGTAAGAGGAGGATGCAAGG
Downstream 100 bases:
>100_bases TAAAAAAGCTTGCAGAGAAATCTGCAAGCTTTTTTCTATGAACGTTTTTTATCAGCAAGGCGCTGCGCTTTTTGCGTATT GGCGAAATGGAGTTTTGTAA
Product: phenylalanyl-tRNA synthetase subunit beta
Products: NA
Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS
Number of amino acids: Translated: 804; Mature: 804
Protein sequence:
>804_residues MFVSYKWLEDYVDLKGMDPAVLAEKITRAGIEVEGIEYKGEGIKGVVIGHVLEREQHPNADKLNKCLVDIGAEAPVQIIC GAPNVDKGQKVAVATVGAVLPGNFKIKKAKLRGEESNGMICSLQELGIESKLVAKEYAEGIFVFPNDAETGSDALAALQL DDAILELGLTPNRADAMNMLGVAYEVAAILDTEVKLPQTDYPAASEQASDYISVKIEDQEANPLYTAKIIKNVTIAPSPL WMQTKLMNAGIRPHNNVVDITNFVLLEYGQPLHAFDYDRFGSKEVVVRKAAENEMIVTLDDQERKLSADHLVITNGTKAQ AVAGVMGGAESEVQEDTKTILLEAAYFNGQKVRKASKDLGLRSESSVRFEKGIDPARVRLAAERAAQLIHLYAGGEVLAG TVEEDHLTIEANNIHVSADKVSSVLGLTISKEELISIYKRLGFTVGEADDLLVVTVPSRRGDITIEEDLIEEAARLYGYD NIPSTLPETAGTTGGLTPYQAKRRKVRRFLEGAGLSQAITYSLTNEKKATAFAIEKSLNTVLALPMSEERSILRHSLVPN LLDSVSYNLARQTDSVALYEVGSVFLTKEEDTKPVETERVAGAVTGLWRKQLWQGEKKPVDFFVVKGIVEGLLDKLNVLD SIEFVQSERKQLHPGRTANILLNGSLIGFIGQVHPSLEKELDIKETYVFELDLHALLAAETAPLVYTAIPKYPSVTRDIA LVTDKTVTSGQLESVIKEAGGKLLKEVTVFDVYEGEHMEEGKKSVAFSLQYVNPEQTLTEEEVTKAHSKVLKALEDTYQA VLRG
Sequences:
>Translated_804_residues MFVSYKWLEDYVDLKGMDPAVLAEKITRAGIEVEGIEYKGEGIKGVVIGHVLEREQHPNADKLNKCLVDIGAEAPVQIIC GAPNVDKGQKVAVATVGAVLPGNFKIKKAKLRGEESNGMICSLQELGIESKLVAKEYAEGIFVFPNDAETGSDALAALQL DDAILELGLTPNRADAMNMLGVAYEVAAILDTEVKLPQTDYPAASEQASDYISVKIEDQEANPLYTAKIIKNVTIAPSPL WMQTKLMNAGIRPHNNVVDITNFVLLEYGQPLHAFDYDRFGSKEVVVRKAAENEMIVTLDDQERKLSADHLVITNGTKAQ AVAGVMGGAESEVQEDTKTILLEAAYFNGQKVRKASKDLGLRSESSVRFEKGIDPARVRLAAERAAQLIHLYAGGEVLAG TVEEDHLTIEANNIHVSADKVSSVLGLTISKEELISIYKRLGFTVGEADDLLVVTVPSRRGDITIEEDLIEEAARLYGYD NIPSTLPETAGTTGGLTPYQAKRRKVRRFLEGAGLSQAITYSLTNEKKATAFAIEKSLNTVLALPMSEERSILRHSLVPN LLDSVSYNLARQTDSVALYEVGSVFLTKEEDTKPVETERVAGAVTGLWRKQLWQGEKKPVDFFVVKGIVEGLLDKLNVLD SIEFVQSERKQLHPGRTANILLNGSLIGFIGQVHPSLEKELDIKETYVFELDLHALLAAETAPLVYTAIPKYPSVTRDIA LVTDKTVTSGQLESVIKEAGGKLLKEVTVFDVYEGEHMEEGKKSVAFSLQYVNPEQTLTEEEVTKAHSKVLKALEDTYQA VLRG >Mature_804_residues MFVSYKWLEDYVDLKGMDPAVLAEKITRAGIEVEGIEYKGEGIKGVVIGHVLEREQHPNADKLNKCLVDIGAEAPVQIIC GAPNVDKGQKVAVATVGAVLPGNFKIKKAKLRGEESNGMICSLQELGIESKLVAKEYAEGIFVFPNDAETGSDALAALQL DDAILELGLTPNRADAMNMLGVAYEVAAILDTEVKLPQTDYPAASEQASDYISVKIEDQEANPLYTAKIIKNVTIAPSPL WMQTKLMNAGIRPHNNVVDITNFVLLEYGQPLHAFDYDRFGSKEVVVRKAAENEMIVTLDDQERKLSADHLVITNGTKAQ AVAGVMGGAESEVQEDTKTILLEAAYFNGQKVRKASKDLGLRSESSVRFEKGIDPARVRLAAERAAQLIHLYAGGEVLAG TVEEDHLTIEANNIHVSADKVSSVLGLTISKEELISIYKRLGFTVGEADDLLVVTVPSRRGDITIEEDLIEEAARLYGYD NIPSTLPETAGTTGGLTPYQAKRRKVRRFLEGAGLSQAITYSLTNEKKATAFAIEKSLNTVLALPMSEERSILRHSLVPN LLDSVSYNLARQTDSVALYEVGSVFLTKEEDTKPVETERVAGAVTGLWRKQLWQGEKKPVDFFVVKGIVEGLLDKLNVLD SIEFVQSERKQLHPGRTANILLNGSLIGFIGQVHPSLEKELDIKETYVFELDLHALLAAETAPLVYTAIPKYPSVTRDIA LVTDKTVTSGQLESVIKEAGGKLLKEVTVFDVYEGEHMEEGKKSVAFSLQYVNPEQTLTEEEVTKAHSKVLKALEDTYQA VLRG
Specific function: Unknown
COG id: COG0072
COG function: function code J; Phenylalanyl-tRNA synthetase beta subunit
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 tRNA-binding domain
Homologues:
Organism=Homo sapiens, GI124028525, Length=273, Percent_Identity=25.2747252747253, Blast_Score=77, Evalue=6e-14, Organism=Escherichia coli, GI1788006, Length=813, Percent_Identity=39.8523985239852, Blast_Score=514, Evalue=1e-147, Organism=Caenorhabditis elegans, GI17533403, Length=561, Percent_Identity=20.4991087344029, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI21355211, Length=286, Percent_Identity=23.7762237762238, Blast_Score=82, Evalue=1e-15,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYFB_BACSU (P17922)
Other databases:
- EMBL: X53057 - EMBL: Z75208 - EMBL: AL009126 - PIR: A69676 - RefSeq: NP_390741.1 - ProteinModelPortal: P17922 - SMR: P17922 - EnsemblBacteria: EBBACT00000003113 - GeneID: 937445 - GenomeReviews: AL009126_GR - KEGG: bsu:BSU28630 - NMPDR: fig|224308.1.peg.2866 - GenoList: BSU28630 - GeneTree: EBGT00050000001777 - HOGENOM: HBG399638 - OMA: ADKLRVC - PhylomeDB: P17922 - ProtClustDB: PRK00629 - BioCyc: BSUB:BSU28630-MONOMER - BRENDA: 6.1.1.20 - GO: GO:0005737 - HAMAP: MF_00283 - InterPro: IPR005146 - InterPro: IPR005147 - InterPro: IPR009061 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR004532 - InterPro: IPR020825 - InterPro: IPR005121 - InterPro: IPR002547 - Gene3D: G3DSA:3.50.40.10 - Gene3D: G3DSA:3.30.56.20 - Gene3D: G3DSA:3.30.70.380 - Gene3D: G3DSA:2.40.50.140 - SMART: SM00873 - SMART: SM00874 - SMART: SM00896 - TIGRFAMs: TIGR00472
Pfam domain/function: PF03483 B3_4; PF03484 B5; PF03147 FDX-ACB; PF01588 tRNA_bind; SSF56037 B3_4; SSF54991 Fdx_AntiC_bd; SSF50249 Nucleic_acid_OB; SSF46955 Putativ_DNA_bind
EC number: =6.1.1.20
Molecular weight: Translated: 87946; Mature: 87946
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: PS51483 B5; PS51447 FDX_ACB; PS50886 TRBD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVSYKWLEDYVDLKGMDPAVLAEKITRAGIEVEGIEYKGEGIKGVVIGHVLEREQHPNA CCEEHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCEEEEHHHHHHHCCCCCH DKLNKCLVDIGAEAPVQIICGAPNVDKGQKVAVATVGAVLPGNFKIKKAKLRGEESNGMI HHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEEECEECCCCEEEEEEEECCCCCCCEE CSLQELGIESKLVAKEYAEGIFVFPNDAETGSDALAALQLDDAILELGLTPNRADAMNML EEHHHCCCCHHHHHHHHHCCEEEECCCCCCCCHHEEEEEHHHHHHHCCCCCCHHHHHHHH GVAYEVAAILDTEVKLPQTDYPAASEQASDYISVKIEDQEANPLYTAKIIKNVTIAPSPL HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEHHHHCCEECCCCC WMQTKLMNAGIRPHNNVVDITNFVLLEYGQPLHAFDYDRFGSKEVVVRKAAENEMIVTLD HHHHHHHHCCCCCCCCEEHHHHEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEC DQERKLSADHLVITNGTKAQAVAGVMGGAESEVQEDTKTILLEAAYFNGQKVRKASKDLG CCCCCCCCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHEEEEEEECCCCHHHHHHHHHCC LRSESSVRFEKGIDPARVRLAAERAAQLIHLYAGGEVLAGTVEEDHLTIEANNIHVSADK CCCCCCCHHHHCCCHHHHHHHHHHHHHEEEEEECCEEEEEEECCCEEEEEECCEEEEHHH VSSVLGLTISKEELISIYKRLGFTVGEADDLLVVTVPSRRGDITIEEDLIEEAARLYGYD HHHHHCCEECHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEHHHHHHHHHHHCCCC NIPSTLPETAGTTGGLTPYQAKRRKVRRFLEGAGLSQAITYSLTNEKKATAFAIEKSLNT CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCCE VLALPMSEERSILRHSLVPNLLDSVSYNLARQTDSVALYEVGSVFLTKEEDTKPVETERV EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECEEEEECCCCCCCCHHHHH AGAVTGLWRKQLWQGEKKPVDFFVVKGIVEGLLDKLNVLDSIEFVQSERKQLHPGRTANI HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE LLNGSLIGFIGQVHPSLEKELDIKETYVFELDLHALLAAETAPLVYTAIPKYPSVTRDIA EECCCCEEHHHHCCCCHHHCCCCCEEEEEEEEHHHHHHHCCCCEEEEECCCCCCCCCCEE LVTDKTVTSGQLESVIKEAGGKLLKEVTVFDVYEGEHMEEGKKSVAFSLQYVNPEQTLTE EEECCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHCCCCEEEEEEEEECCHHHCCH EEVTKAHSKVLKALEDTYQAVLRG HHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFVSYKWLEDYVDLKGMDPAVLAEKITRAGIEVEGIEYKGEGIKGVVIGHVLEREQHPNA CCEEHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCEEEEHHHHHHHCCCCCH DKLNKCLVDIGAEAPVQIICGAPNVDKGQKVAVATVGAVLPGNFKIKKAKLRGEESNGMI HHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEEECEECCCCEEEEEEEECCCCCCCEE CSLQELGIESKLVAKEYAEGIFVFPNDAETGSDALAALQLDDAILELGLTPNRADAMNML EEHHHCCCCHHHHHHHHHCCEEEECCCCCCCCHHEEEEEHHHHHHHCCCCCCHHHHHHHH GVAYEVAAILDTEVKLPQTDYPAASEQASDYISVKIEDQEANPLYTAKIIKNVTIAPSPL HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEHHHHCCEECCCCC WMQTKLMNAGIRPHNNVVDITNFVLLEYGQPLHAFDYDRFGSKEVVVRKAAENEMIVTLD HHHHHHHHCCCCCCCCEEHHHHEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEC DQERKLSADHLVITNGTKAQAVAGVMGGAESEVQEDTKTILLEAAYFNGQKVRKASKDLG CCCCCCCCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHEEEEEEECCCCHHHHHHHHHCC LRSESSVRFEKGIDPARVRLAAERAAQLIHLYAGGEVLAGTVEEDHLTIEANNIHVSADK CCCCCCCHHHHCCCHHHHHHHHHHHHHEEEEEECCEEEEEEECCCEEEEEECCEEEEHHH VSSVLGLTISKEELISIYKRLGFTVGEADDLLVVTVPSRRGDITIEEDLIEEAARLYGYD HHHHHCCEECHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEHHHHHHHHHHHCCCC NIPSTLPETAGTTGGLTPYQAKRRKVRRFLEGAGLSQAITYSLTNEKKATAFAIEKSLNT CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCCE VLALPMSEERSILRHSLVPNLLDSVSYNLARQTDSVALYEVGSVFLTKEEDTKPVETERV EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECEEEEECCCCCCCCHHHHH AGAVTGLWRKQLWQGEKKPVDFFVVKGIVEGLLDKLNVLDSIEFVQSERKQLHPGRTANI HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE LLNGSLIGFIGQVHPSLEKELDIKETYVFELDLHALLAAETAPLVYTAIPKYPSVTRDIA EECCCCEEHHHHCCCCHHHCCCCCEEEEEEEEHHHHHHHCCCCEEEEECCCCCCCCCCEE LVTDKTVTSGQLESVIKEAGGKLLKEVTVFDVYEGEHMEEGKKSVAFSLQYVNPEQTLTE EEECCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHCCCCEEEEEEEEECCHHHCCH EEVTKAHSKVLKALEDTYQAVLRG HHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2127701; 1903307; 8969504; 9384377