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The map label for this gene is udk

Identifier: 16079787

GI number: 16079787

Start: 2792218

End: 2792853

Strand: Reverse

Name: udk

Synonym: BSU27330

Alternate gene names: 16079787

Gene position: 2792853-2792218 (Counterclockwise)

Preceding gene: 16079788

Following gene: 16079786

Centisome position: 66.25

GC content: 41.04

Gene sequence:

>636_bases
ATGGGTAAGAATCCAGTAGTCATTGGAATCGCAGGAGGTTCCGGTTCAGGAAAAACGAGTGTCACACGGTCCATTTATGA
ACAGTTTAAAGGACACTCAATTTTAATGATCCAGCAGGACCTTTATTATAAAGACCAAAGCCATCTTCCGTTTGAAGAAA
GGCTGAACACAAACTATGATCATCCGCTTGCGTTTGATAATGACTATTTAATCGAGCATATTCAAGATCTATTGAATTAC
CGCCCGATTGAAAAGCCGATTTATGACTATAAGCTTCACACACGTTCAGAAGAAACGGTTCACGTAGAGCCAAAGGATGT
TATTATCCTTGAAGGCATTCTTGTTCTTGAAGACAAAAGGCTTCGTGATCTGATGGATATCAAGCTTTATGTTGATACGG
ACGCTGACTTGCGTATCATCAGACGGATTATGAGAGATATTAATGAGCGCGGACGCTCTATTGATTCTGTCATTGAACAA
TATGTGTCAGTGGTCCGTCCGATGCATAACCAATTCGTCGAGCCGACGAAACGATACGCTGATATTATTATCCCGGAAGG
CGGTCAGAATCACGTCGCAATTGATCTGATGGTCACAAAAATTCAAACCATTCTTGAACAAAACGCGATTTTGTAA

Upstream 100 bases:

>100_bases
TGAGCTAGATGCTGCCCGCCATCCCCTGCAAATTGTCAAATTCAAACTAGACAAAAAGATTTATCCGAGCAACATGATGA
GAAAGGGGAAGTAACAGCCC

Downstream 100 bases:

>100_bases
TACCATAGCATAGACATAAATAACTCTGACCATATTATGTATAGGCAGGAAGGGAATGTGCGAATTCCCTTCTTTCCCTG
TTTATAAACGCGAAATATTT

Product: uridine kinase

Products: NA

Alternate protein names: Cytidine monophosphokinase; Uridine monophosphokinase [H]

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MGKNPVVIGIAGGSGSGKTSVTRSIYEQFKGHSILMIQQDLYYKDQSHLPFEERLNTNYDHPLAFDNDYLIEHIQDLLNY
RPIEKPIYDYKLHTRSEETVHVEPKDVIILEGILVLEDKRLRDLMDIKLYVDTDADLRIIRRIMRDINERGRSIDSVIEQ
YVSVVRPMHNQFVEPTKRYADIIIPEGGQNHVAIDLMVTKIQTILEQNAIL

Sequences:

>Translated_211_residues
MGKNPVVIGIAGGSGSGKTSVTRSIYEQFKGHSILMIQQDLYYKDQSHLPFEERLNTNYDHPLAFDNDYLIEHIQDLLNY
RPIEKPIYDYKLHTRSEETVHVEPKDVIILEGILVLEDKRLRDLMDIKLYVDTDADLRIIRRIMRDINERGRSIDSVIEQ
YVSVVRPMHNQFVEPTKRYADIIIPEGGQNHVAIDLMVTKIQTILEQNAIL
>Mature_210_residues
GKNPVVIGIAGGSGSGKTSVTRSIYEQFKGHSILMIQQDLYYKDQSHLPFEERLNTNYDHPLAFDNDYLIEHIQDLLNYR
PIEKPIYDYKLHTRSEETVHVEPKDVIILEGILVLEDKRLRDLMDIKLYVDTDADLRIIRRIMRDINERGRSIDSVIEQY
VSVVRPMHNQFVEPTKRYADIIIPEGGQNHVAIDLMVTKIQTILEQNAIL

Specific function: Pyrimidine salvage pathway. [C]

COG id: COG0572

COG function: function code F; Uridine kinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the uridine kinase family [H]

Homologues:

Organism=Homo sapiens, GI18699734, Length=216, Percent_Identity=40.7407407407407, Blast_Score=186, Evalue=1e-47,
Organism=Homo sapiens, GI301129207, Length=207, Percent_Identity=42.0289855072464, Blast_Score=178, Evalue=4e-45,
Organism=Homo sapiens, GI57863312, Length=210, Percent_Identity=41.4285714285714, Blast_Score=177, Evalue=4e-45,
Organism=Homo sapiens, GI13899253, Length=215, Percent_Identity=39.0697674418605, Blast_Score=167, Evalue=7e-42,
Organism=Homo sapiens, GI209863022, Length=185, Percent_Identity=32.4324324324324, Blast_Score=107, Evalue=8e-24,
Organism=Escherichia coli, GI87082034, Length=205, Percent_Identity=54.6341463414634, Blast_Score=228, Evalue=2e-61,
Organism=Caenorhabditis elegans, GI17539894, Length=207, Percent_Identity=40.5797101449275, Blast_Score=173, Evalue=6e-44,
Organism=Caenorhabditis elegans, GI17539892, Length=207, Percent_Identity=40.5797101449275, Blast_Score=173, Evalue=7e-44,
Organism=Caenorhabditis elegans, GI71981181, Length=213, Percent_Identity=36.150234741784, Blast_Score=139, Evalue=1e-33,
Organism=Saccharomyces cerevisiae, GI6324339, Length=195, Percent_Identity=34.3589743589744, Blast_Score=111, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6320223, Length=216, Percent_Identity=27.3148148148148, Blast_Score=72, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24649624, Length=215, Percent_Identity=41.8604651162791, Blast_Score=173, Evalue=6e-44,
Organism=Drosophila melanogaster, GI221458995, Length=219, Percent_Identity=40.6392694063927, Blast_Score=173, Evalue=9e-44,
Organism=Drosophila melanogaster, GI28573516, Length=204, Percent_Identity=40.1960784313725, Blast_Score=164, Evalue=4e-41,
Organism=Drosophila melanogaster, GI28573514, Length=204, Percent_Identity=40.1960784313725, Blast_Score=164, Evalue=4e-41,
Organism=Drosophila melanogaster, GI28573512, Length=204, Percent_Identity=40.1960784313725, Blast_Score=164, Evalue=4e-41,
Organism=Drosophila melanogaster, GI45550449, Length=204, Percent_Identity=40.1960784313725, Blast_Score=164, Evalue=5e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006083
- InterPro:   IPR000764 [H]

Pfam domain/function: PF00485 PRK [H]

EC number: =2.7.1.48 [H]

Molecular weight: Translated: 24487; Mature: 24356

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKNPVVIGIAGGSGSGKTSVTRSIYEQFKGHSILMIQQDLYYKDQSHLPFEERLNTNYD
CCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHCCCCCC
HPLAFDNDYLIEHIQDLLNYRPIEKPIYDYKLHTRSEETVHVEPKDVIILEGILVLEDKR
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEECCCCEEEEECEEEECCHH
LRDLMDIKLYVDTDADLRIIRRIMRDINERGRSIDSVIEQYVSVVRPMHNQFVEPTKRYA
HHHHHEEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH
DIIIPEGGQNHVAIDLMVTKIQTILEQNAIL
EEEECCCCCCCEEEHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GKNPVVIGIAGGSGSGKTSVTRSIYEQFKGHSILMIQQDLYYKDQSHLPFEERLNTNYD
CCCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHCCCCCC
HPLAFDNDYLIEHIQDLLNYRPIEKPIYDYKLHTRSEETVHVEPKDVIILEGILVLEDKR
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEECCCCEEEEECEEEECCHH
LRDLMDIKLYVDTDADLRIIRRIMRDINERGRSIDSVIEQYVSVVRPMHNQFVEPTKRYA
HHHHHEEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH
DIIIPEGGQNHVAIDLMVTKIQTILEQNAIL
EEEECCCCCCCEEEHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA