Click here to switch to the map view.

The map label for this gene is yrrS

Identifier: 16079784

GI number: 16079784

Start: 2788920

End: 2789621

Strand: Reverse

Name: yrrS

Synonym: BSU27300

Alternate gene names: 16079784

Gene position: 2789621-2788920 (Counterclockwise)

Preceding gene: 16079785

Following gene: 16079782

Centisome position: 66.17

GC content: 42.45

Gene sequence:

>702_bases
TTGAGCAATAATCAATCTCGTTATGAAAATCGTGATAAACGCAGAAAAGCCAATTTAGTGCTTAACATTTTAATCGCAAT
CGTATCCATACTAATTGTCGTAGTAGCAGCGAATCTCTTCATTAACAGTCCTTCTAGCAAAGATGTCAGCAAGGATTCTG
AAACGGCGCAAAAACAGGAATCTCCGGCTTCAGGAAAGACGGAAAAGAAATCGGATGAGGATATAAAAGACAGCAAGAAA
GATACATCTGACAGCGAAAAGGATTCTGAGAAGTCTTCTGACTCTGATTCCAAAAAAGATGATTCTTCTTCTAAAAAAGA
TGACTCTGATTCAGATTCAAGCTCAGATTCAGCCGGTGACGGGCTTAAAGATGCAAAAGTAACAGAAGGCGGCTCATCGA
GCGATGTGGAAAAAACGTATGAAAATCCTGACTGGAAAGCAGTCGGAACTGAGCAGACTGGCGAGCATGCCGCTACTTAT
GATTCAAGCTCACAAGACTGGGCTGAGATGCTGAAAGCCATTTCGTACGCAACTGGTGTCTCAACAGATAACATGACGGT
GCTCTGGCTTGGAAATAACGGCAGCCCTCAGGATGCCAAAGGCAAGATTTTGGACAAGGCGACTGGGAATAAATATCAAG
TCACGATTACATGGGTCGATGAAAAAGGCTGGAAGCCGACAAAAGTAGAAAAGCTAAAATAA

Upstream 100 bases:

>100_bases
AAAAAAGTACACGAAATTGAAATCAATCAGAAATAGAACAACTTCTCAGCACATGTTAAAATATATGCTGAGCCAAGAGG
GATAAAGGAGTGCAGAATTA

Downstream 100 bases:

>100_bases
ACAAAAGCAGCCGGGTTAAAACCGGCTGCTTTTGTTTTAGGCTTCAGCTGAGAAATGAACCACCGCGCTGTACAATATTC
TTCCTTCTGCCACAAGAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MSNNQSRYENRDKRRKANLVLNILIAIVSILIVVVAANLFINSPSSKDVSKDSETAQKQESPASGKTEKKSDEDIKDSKK
DTSDSEKDSEKSSDSDSKKDDSSSKKDDSDSDSSSDSAGDGLKDAKVTEGGSSSDVEKTYENPDWKAVGTEQTGEHAATY
DSSSQDWAEMLKAISYATGVSTDNMTVLWLGNNGSPQDAKGKILDKATGNKYQVTITWVDEKGWKPTKVEKLK

Sequences:

>Translated_233_residues
MSNNQSRYENRDKRRKANLVLNILIAIVSILIVVVAANLFINSPSSKDVSKDSETAQKQESPASGKTEKKSDEDIKDSKK
DTSDSEKDSEKSSDSDSKKDDSSSKKDDSDSDSSSDSAGDGLKDAKVTEGGSSSDVEKTYENPDWKAVGTEQTGEHAATY
DSSSQDWAEMLKAISYATGVSTDNMTVLWLGNNGSPQDAKGKILDKATGNKYQVTITWVDEKGWKPTKVEKLK
>Mature_232_residues
SNNQSRYENRDKRRKANLVLNILIAIVSILIVVVAANLFINSPSSKDVSKDSETAQKQESPASGKTEKKSDEDIKDSKKD
TSDSEKDSEKSSDSDSKKDDSSSKKDDSDSDSSSDSAGDGLKDAKVTEGGSSSDVEKTYENPDWKAVGTEQTGEHAATYD
SSSQDWAEMLKAISYATGVSTDNMTVLWLGNNGSPQDAKGKILDKATGNKYQVTITWVDEKGWKPTKVEKLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YRRS_BACSU (O32031)

Other databases:

- EMBL:   AL009126
- PIR:   B69980
- RefSeq:   NP_390608.1
- ProteinModelPortal:   O32031
- EnsemblBacteria:   EBBACT00000003683
- GeneID:   936614
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU27300
- NMPDR:   fig|224308.1.peg.2733
- GenoList:   BSU27300
- GeneTree:   EBGT00050000000179
- HOGENOM:   HBG533112
- OMA:   SSTSVDW
- ProtClustDB:   CLSK887661
- BioCyc:   BSUB:BSU27300-MONOMER
- InterPro:   IPR009988

Pfam domain/function: PF07423 DUF1510

EC number: NA

Molecular weight: Translated: 25334; Mature: 25202

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x114aec18)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNNQSRYENRDKRRKANLVLNILIAIVSILIVVVAANLFINSPSSKDVSKDSETAQKQE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHC
SPASGKTEKKSDEDIKDSKKDTSDSEKDSEKSSDSDSKKDDSSSKKDDSDSDSSSDSAGD
CCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GLKDAKVTEGGSSSDVEKTYENPDWKAVGTEQTGEHAATYDSSSQDWAEMLKAISYATGV
CCCCCEECCCCCCCCHHHHHCCCCCEEECCCCCCCCHHCCCCCCHHHHHHHHHHHHHHCC
STDNMTVLWLGNNGSPQDAKGKILDKATGNKYQVTITWVDEKGWKPTKVEKLK
CCCCEEEEEECCCCCCCCCCCCEEECCCCCEEEEEEEEECCCCCCCCCCCCCH
>Mature Secondary Structure 
SNNQSRYENRDKRRKANLVLNILIAIVSILIVVVAANLFINSPSSKDVSKDSETAQKQE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHC
SPASGKTEKKSDEDIKDSKKDTSDSEKDSEKSSDSDSKKDDSSSKKDDSDSDSSSDSAGD
CCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GLKDAKVTEGGSSSDVEKTYENPDWKAVGTEQTGEHAATYDSSSQDWAEMLKAISYATGV
CCCCCEECCCCCCCCHHHHHCCCCCEEECCCCCCCCHHCCCCCCHHHHHHHHHHHHHHCC
STDNMTVLWLGNNGSPQDAKGKILDKATGNKYQVTITWVDEKGWKPTKVEKLK
CCCCEEEEEECCCCCCCCCCCCEEECCCCCEEEEEEEEECCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377