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The map label for this gene is rsiV

Identifier: 16079767

GI number: 16079767

Start: 2770350

End: 2771207

Strand: Direct

Name: rsiV

Synonym: BSU27130

Alternate gene names: 16079767

Gene position: 2770350-2771207 (Clockwise)

Preceding gene: 16079766

Following gene: 16079768

Centisome position: 65.72

GC content: 38.34

Gene sequence:

>858_bases
ATGGATAAGAGATTACAGCAATTAAGAGAAGAATATAAAAATGTTCAGATTCCTAAAGAATTGGATATCATTGTTGAAAA
AGCCCTTCAGCAAGAACCAAAAAAGAAAAGAATCGTTATGTGGCCGACATCAGCAGCAATCGCTGCAGCTATTTTATTCA
CTGCGCTTGTTAATATCAACCCGGACGCCGCTCAGGCTATGTCAAAGATCCCTGTCATCGGCAAAATCGTCAAAGCGATC
ACCTTTATTGAAATCAAAGAGGAAAAAGACCAATCAAGCATTGATGTCAAAACACCTGCTTTGTCCGGGCTTTCTAATAA
AGAGCTTGAAAACAGCATTAACGAGAAATACTTGAAAGAAAGCCAGCAGCTGTATAAAGAGTTTATACAGTCCACATCCA
AAAACAAAAAAGGGCATCTCAGCATCTACAGTGATTACGAGACGGTCACAGACACGCCAGATTTACTCTCTATCCGGCGC
AATATTGAAACAACACAAGCATCTTCCTACACACAAAGCCGTTATATTACAATTGACAAAAAGAATGATATTTTACTTAC
ATTAAAAAGCTTATTCAAAGATGAGCGCTATATCAAAGTCATCAGTCAAAACATCAAAGAACAAATGAAACAGCAAATGA
AGGAAGATCCAAATAAAATATATTGGCTCACTGACGAAGATGCAGAACCGTTCAAAACGATTCTTCCTGATCAGACGTTT
TACATTACTGAAGACCATAAACTTGTGATCTCATTTGACGAATATGAAGTCGCCCCCGGCTATATGGGCGTTACAGAGTT
TACAATTCCAACCGGCGTCATTTCAAACTTGCTCGTGGGAGAACGTTATATTCGATAA

Upstream 100 bases:

>100_bases
TTGCGGAAATTACAGGAGAAAACACGAATACCGTCAAAACGCGCCTATACAGAGCATTGAAGCTGATGCGCATTCAGTTG
ACGAAGGAGGATCTTTCTTA

Downstream 100 bases:

>100_bases
AATAAAAACATCCATCTAAGATTATGGATGTTTTCTCTCTTCTCTATTCGAGGTCGTAACCCCGCTATCAAAAACAACGA
GAATATTTGCATACTATTGG

Product: anti-sigma(V) factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MDKRLQQLREEYKNVQIPKELDIIVEKALQQEPKKKRIVMWPTSAAIAAAILFTALVNINPDAAQAMSKIPVIGKIVKAI
TFIEIKEEKDQSSIDVKTPALSGLSNKELENSINEKYLKESQQLYKEFIQSTSKNKKGHLSIYSDYETVTDTPDLLSIRR
NIETTQASSYTQSRYITIDKKNDILLTLKSLFKDERYIKVISQNIKEQMKQQMKEDPNKIYWLTDEDAEPFKTILPDQTF
YITEDHKLVISFDEYEVAPGYMGVTEFTIPTGVISNLLVGERYIR

Sequences:

>Translated_285_residues
MDKRLQQLREEYKNVQIPKELDIIVEKALQQEPKKKRIVMWPTSAAIAAAILFTALVNINPDAAQAMSKIPVIGKIVKAI
TFIEIKEEKDQSSIDVKTPALSGLSNKELENSINEKYLKESQQLYKEFIQSTSKNKKGHLSIYSDYETVTDTPDLLSIRR
NIETTQASSYTQSRYITIDKKNDILLTLKSLFKDERYIKVISQNIKEQMKQQMKEDPNKIYWLTDEDAEPFKTILPDQTF
YITEDHKLVISFDEYEVAPGYMGVTEFTIPTGVISNLLVGERYIR
>Mature_285_residues
MDKRLQQLREEYKNVQIPKELDIIVEKALQQEPKKKRIVMWPTSAAIAAAILFTALVNINPDAAQAMSKIPVIGKIVKAI
TFIEIKEEKDQSSIDVKTPALSGLSNKELENSINEKYLKESQQLYKEFIQSTSKNKKGHLSIYSDYETVTDTPDLLSIRR
NIETTQASSYTQSRYITIDKKNDILLTLKSLFKDERYIKVISQNIKEQMKQQMKEDPNKIYWLTDEDAEPFKTILPDQTF
YITEDHKLVISFDEYEVAPGYMGVTEFTIPTGVISNLLVGERYIR

Specific function: Anti-sigma factor for sigV. Negatively regulates sigV activity through direct interaction

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSIV_BACSU (O05403)

Other databases:

- EMBL:   U93874
- EMBL:   AL009126
- PIR:   D69975
- RefSeq:   NP_390591.1
- ProteinModelPortal:   O05403
- SMR:   O05403
- IntAct:   O05403
- EnsemblBacteria:   EBBACT00000002323
- GeneID:   937593
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU27130
- NMPDR:   fig|224308.1.peg.2716
- GenoList:   BSU27130
- GeneTree:   EBGT00050000000565
- HOGENOM:   HBG338596
- OMA:   ENIKEQM
- ProtClustDB:   CLSK887650
- BioCyc:   BSUB:BSU27130-MONOMER
- InterPro:   IPR021729

Pfam domain/function: PF11738 DUF3298

EC number: NA

Molecular weight: Translated: 32868; Mature: 32868

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x10c75300)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKRLQQLREEYKNVQIPKELDIIVEKALQQEPKKKRIVMWPTSAAIAAAILFTALVNIN
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHCCC
PDAAQAMSKIPVIGKIVKAITFIEIKEEKDQSSIDVKTPALSGLSNKELENSINEKYLKE
CHHHHHHHHCCHHHHHHHHHHHHEEECCCCCCCCEEECCHHCCCCHHHHHHHHHHHHHHH
SQQLYKEFIQSTSKNKKGHLSIYSDYETVTDTPDLLSIRRNIETTQASSYTQSRYITIDK
HHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCHHHHCCCCCCEEEEEEC
KNDILLTLKSLFKDERYIKVISQNIKEQMKQQMKEDPNKIYWLTDEDAEPFKTILPDQTF
CCCCEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHCCCCEE
YITEDHKLVISFDEYEVAPGYMGVTEFTIPTGVISNLLVGERYIR
EEECCCEEEEEECCEEECCCCCCCEEECCCHHHHHHHHHHHHHCH
>Mature Secondary Structure
MDKRLQQLREEYKNVQIPKELDIIVEKALQQEPKKKRIVMWPTSAAIAAAILFTALVNIN
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHCCC
PDAAQAMSKIPVIGKIVKAITFIEIKEEKDQSSIDVKTPALSGLSNKELENSINEKYLKE
CHHHHHHHHCCHHHHHHHHHHHHEEECCCCCCCCEEECCHHCCCCHHHHHHHHHHHHHHH
SQQLYKEFIQSTSKNKKGHLSIYSDYETVTDTPDLLSIRRNIETTQASSYTQSRYITIDK
HHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCHHHHCCCCCCEEEEEEC
KNDILLTLKSLFKDERYIKVISQNIKEQMKQQMKEDPNKIYWLTDEDAEPFKTILPDQTF
CCCCEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHCCCCEE
YITEDHKLVISFDEYEVAPGYMGVTEFTIPTGVISNLLVGERYIR
EEECCCEEEEEECCEEECCCCCCCEEECCCHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377