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The map label for this gene is yraO

Identifier: 16079739

GI number: 16079739

Start: 2744163

End: 2745479

Strand: Reverse

Name: yraO

Synonym: BSU26860

Alternate gene names: 16079739

Gene position: 2745479-2744163 (Counterclockwise)

Preceding gene: 16079740

Following gene: 16079737

Centisome position: 65.13

GC content: 39.1

Gene sequence:

>1317_bases
ATGCTTACTATTTTAGGTTTTTCGATGGTAACTGTTTTTACAATATTAATAATGACAAAGAAAGTCTCGCCTATTGTTGC
CTTGACCATCACTCCCATTGTTTTTGCTCTTATTGGAGGTTTTGGTAAGGGTATTGGCGACATGATTTTAGAAGGAATTC
AAACAGTTGCAAGTTCAGCGGCATTGCTATTGTTTGCTATTCTTTTTTTCGGAATTTTAATTGATGCAGGTTTATTTGAT
CCGCTAATAGAAAAAATTTTATCTATAGTAAAGGGAGACCCTGTGAAAATAGCGATAGGGTCTGCCGTCTTGGCAATGCT
TATCGCTTTAGATGGGGACGGTACAACAACCTATATGATAACAGTCTCAGCAATGTTACCTTTGTATAAAAGAATTGGTA
TGAATCCCATGGTTATGGCGACATTAGCAATGCTGTCGTTGAGTATCGTTAGCGGAATGACTCCATGGGGCGGACCAGCT
ACAAGAGCGATTTCAGTGCTGGGTTTGGATCCTTCAGATTTCTTTGTGCCATTACTTCCGACCATGCTTGGAGGTATTGC
TTGTGTGATATTTCTGGCTTTTCTAATGGGAAGGAAAGAGAGGAATCGAATAGGCATCGTTCAATTAGAGCCTAGACATA
TAACAAAGGACAGCTCTCAATCTTATATGGCTGCTACTTTGGAGAGCGAACAATTGAAAAGGCCACGCTTAATATATCTT
AATTTATTCCTCGTTATAAGTATCATGGTGTTTATTGTGCTTGGAACTAAGCATCCGTCAGTTTTATTTTTAATTGGTTT
TGTTCTTGCCCTTACTATAAATTATCCGAATGTAAAAATGCAGAAGGAGCGAATCGCCGAGCATTCTGGTAATGCCATAA
CCGTGGTATTATTGGTATTTTCAGCAGGAGTATTTGCTGGTATATTATCCGGGACAAAGATGGTGGATGCCATAGCAGGA
TCATTAATATCCATCATCCCCTCATCAATGGGAGGGTTTTTCCCCGTTATTGTAGCACTCACTAGTATTCCGTTTACTTT
TGTTTTATCAAATGATGCATATTACTTTGGTATGGTACCTATCTTTGCAGAAGCTGCCTCAGCATATGGTATAGAACCAG
TAGAAATTGCAAGGGCTTCTATAATGGGGCAGCCGGTTCATCTGATGAGTCCATTGGTTGCGTCAACAGTATTGCTAGTA
AGCATGCTTAAAATGGACTTGGGGTCATTTCAAAGGTTTGCCGTTAAGTGGGCTGTAATTACATCATTAGTTATTACGTT
GTTAGCAATCATTACAGGGGCTATTACTATTTTGTAA

Upstream 100 bases:

>100_bases
TTTTTTTGAAACACAGTAAAAAAATATTTATTTAACTTATTACACCGTATAAGATATGTTAATCAAAAGTCATTTGAAAG
CGCATTCTTGGAGGTGTAAT

Downstream 100 bases:

>100_bases
AGAAACAATAATAATATTTAGACTGCCAATGAATCATTAGTTTGATTGATTTAAATACAGCTGAAAGGGGTCCCAAGCTG
ATCAAGCCAGTTGTCTTTCC

Product: citrate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 438

Protein sequence:

>438_residues
MLTILGFSMVTVFTILIMTKKVSPIVALTITPIVFALIGGFGKGIGDMILEGIQTVASSAALLLFAILFFGILIDAGLFD
PLIEKILSIVKGDPVKIAIGSAVLAMLIALDGDGTTTYMITVSAMLPLYKRIGMNPMVMATLAMLSLSIVSGMTPWGGPA
TRAISVLGLDPSDFFVPLLPTMLGGIACVIFLAFLMGRKERNRIGIVQLEPRHITKDSSQSYMAATLESEQLKRPRLIYL
NLFLVISIMVFIVLGTKHPSVLFLIGFVLALTINYPNVKMQKERIAEHSGNAITVVLLVFSAGVFAGILSGTKMVDAIAG
SLISIIPSSMGGFFPVIVALTSIPFTFVLSNDAYYFGMVPIFAEAASAYGIEPVEIARASIMGQPVHLMSPLVASTVLLV
SMLKMDLGSFQRFAVKWAVITSLVITLLAIITGAITIL

Sequences:

>Translated_438_residues
MLTILGFSMVTVFTILIMTKKVSPIVALTITPIVFALIGGFGKGIGDMILEGIQTVASSAALLLFAILFFGILIDAGLFD
PLIEKILSIVKGDPVKIAIGSAVLAMLIALDGDGTTTYMITVSAMLPLYKRIGMNPMVMATLAMLSLSIVSGMTPWGGPA
TRAISVLGLDPSDFFVPLLPTMLGGIACVIFLAFLMGRKERNRIGIVQLEPRHITKDSSQSYMAATLESEQLKRPRLIYL
NLFLVISIMVFIVLGTKHPSVLFLIGFVLALTINYPNVKMQKERIAEHSGNAITVVLLVFSAGVFAGILSGTKMVDAIAG
SLISIIPSSMGGFFPVIVALTSIPFTFVLSNDAYYFGMVPIFAEAASAYGIEPVEIARASIMGQPVHLMSPLVASTVLLV
SMLKMDLGSFQRFAVKWAVITSLVITLLAIITGAITIL
>Mature_438_residues
MLTILGFSMVTVFTILIMTKKVSPIVALTITPIVFALIGGFGKGIGDMILEGIQTVASSAALLLFAILFFGILIDAGLFD
PLIEKILSIVKGDPVKIAIGSAVLAMLIALDGDGTTTYMITVSAMLPLYKRIGMNPMVMATLAMLSLSIVSGMTPWGGPA
TRAISVLGLDPSDFFVPLLPTMLGGIACVIFLAFLMGRKERNRIGIVQLEPRHITKDSSQSYMAATLESEQLKRPRLIYL
NLFLVISIMVFIVLGTKHPSVLFLIGFVLALTINYPNVKMQKERIAEHSGNAITVVLLVFSAGVFAGILSGTKMVDAIAG
SLISIIPSSMGGFFPVIVALTSIPFTFVLSNDAYYFGMVPIFAEAASAYGIEPVEIARASIMGQPVHLMSPLVASTVLLV
SMLKMDLGSFQRFAVKWAVITSLVITLLAIITGAITIL

Specific function: Transports the free citrate anion

COG id: COG2851

COG function: function code C; H+/citrate symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CitM (TC 2.A.11) transporter family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YRAO_BACSU (O05407)

Other databases:

- EMBL:   U93875
- EMBL:   AL009126
- EMBL:   X92868
- PIR:   G69971
- RefSeq:   NP_390563.1
- ProteinModelPortal:   O05407
- EnsemblBacteria:   EBBACT00000002934
- GeneID:   937610
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU26860
- NMPDR:   fig|224308.1.peg.2688
- GenoList:   BSU26860
- GeneTree:   EBGT00050000001369
- HOGENOM:   HBG297065
- OMA:   LSIMSGM
- ProtClustDB:   CLSK887641
- BioCyc:   BSUB:BSU26860-MONOMER
- InterPro:   IPR014738
- InterPro:   IPR004680
- PANTHER:   PTHR10283:SF44
- TIGRFAMs:   TIGR00784

Pfam domain/function: PF03600 CitMHS

EC number: NA

Molecular weight: Translated: 46728; Mature: 46728

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x10d8c0dc)-; HASH(0x103586b8)-; HASH(0x10d11d48)-; HASH(0x1123b280)-; HASH(0x101f5ea4)-; HASH(0x11332574)-; HASH(0xfebfd20)-; HASH(0x111aad24)-; HASH(0x1130ecb4)-; HASH(0x10fd1854)-; HASH(0x11382580)-; HASH(0x113233cc)-;

Cys/Met content:

0.2 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTILGFSMVTVFTILIMTKKVSPIVALTITPIVFALIGGFGKGIGDMILEGIQTVASSA
CEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
ALLLFAILFFGILIDAGLFDPLIEKILSIVKGDPVKIAIGSAVLAMLIALDGDGTTTYMI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCCEEEEE
TVSAMLPLYKRIGMNPMVMATLAMLSLSIVSGMTPWGGPATRAISVLGLDPSDFFVPLLP
EHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEEEECCCCHHHHHHHH
TMLGGIACVIFLAFLMGRKERNRIGIVQLEPRHITKDSSQSYMAATLESEQLKRPRLIYL
HHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHCHHHCCCCHHHHH
NLFLVISIMVFIVLGTKHPSVLFLIGFVLALTINYPNVKMQKERIAEHSGNAITVVLLVF
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHH
SAGVFAGILSGTKMVDAIAGSLISIIPSSMGGFFPVIVALTSIPFTFVLSNDAYYFGMVP
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEEECCCEEEEHHH
IFAEAASAYGIEPVEIARASIMGQPVHLMSPLVASTVLLVSMLKMDLGSFQRFAVKWAVI
HHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSLVITLLAIITGAITIL
HHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MLTILGFSMVTVFTILIMTKKVSPIVALTITPIVFALIGGFGKGIGDMILEGIQTVASSA
CEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
ALLLFAILFFGILIDAGLFDPLIEKILSIVKGDPVKIAIGSAVLAMLIALDGDGTTTYMI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCCEEEEE
TVSAMLPLYKRIGMNPMVMATLAMLSLSIVSGMTPWGGPATRAISVLGLDPSDFFVPLLP
EHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEEEECCCCHHHHHHHH
TMLGGIACVIFLAFLMGRKERNRIGIVQLEPRHITKDSSQSYMAATLESEQLKRPRLIYL
HHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHCHHHCCCCHHHHH
NLFLVISIMVFIVLGTKHPSVLFLIGFVLALTINYPNVKMQKERIAEHSGNAITVVLLVF
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHH
SAGVFAGILSGTKMVDAIAGSLISIIPSSMGGFFPVIVALTSIPFTFVLSNDAYYFGMVP
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEEECCCEEEEHHH
IFAEAASAYGIEPVEIARASIMGQPVHLMSPLVASTVLLVSMLKMDLGSFQRFAVKWAVI
HHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSLVITLLAIITGAITIL
HHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377; 9141695