Click here to switch to the map view.

The map label for this gene is azlD

Identifier: 16079723

GI number: 16079723

Start: 2728647

End: 2728979

Strand: Reverse

Name: azlD

Synonym: BSU26700

Alternate gene names: 16079723

Gene position: 2728979-2728647 (Counterclockwise)

Preceding gene: 16079724

Following gene: 16079722

Centisome position: 64.74

GC content: 43.24

Gene sequence:

>333_bases
ATGACGATGACTATGACGCAGCAAATGATCACCATCGCAATGGTCGTGCTTGGAACAATGCTGACACGGTTCCTTCCATT
CATGATTTTCCCGTCTGGCAAACCGACACCGAAATATGTACAGTATCTTGGTAAAGTGCTGCCATCAGCGGTAATCGGGC
TTTTAGTCATTTATTGTTTGAAAGATGTGAGTCTACTTTCTGGAAGTCATGGCATTCCTGAATTGGTTGGAGCAGCTGCT
GTTGTACTGCTTCACTTGTGGAAGAAAAATATGCTTCTTTCCATAGCGGGGGGAACCGTTGTTTATATGGTTTTGGTGCA
ATTGGTTTTTTAA

Upstream 100 bases:

>100_bases
TCCTTTTTGGCGGAAACCAATTTATTATTCCTGCTATGCTCGCCATTTTAGGGGTACTGACTGTTCTGAGAAAACCATTG
GAGAAAGCTGAGGTTTCCGT

Downstream 100 bases:

>100_bases
CCGATATCGGAAACGATCAAAATGATCATGCTTTTATTTAACTTGATAAAAATATATAAAACTGACACAAGCTTATTTTG
GAATCAACACTGTGCCAGTG

Product: branched-chain amino acid transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MTMTMTQQMITIAMVVLGTMLTRFLPFMIFPSGKPTPKYVQYLGKVLPSAVIGLLVIYCLKDVSLLSGSHGIPELVGAAA
VVLLHLWKKNMLLSIAGGTVVYMVLVQLVF

Sequences:

>Translated_110_residues
MTMTMTQQMITIAMVVLGTMLTRFLPFMIFPSGKPTPKYVQYLGKVLPSAVIGLLVIYCLKDVSLLSGSHGIPELVGAAA
VVLLHLWKKNMLLSIAGGTVVYMVLVQLVF
>Mature_109_residues
TMTMTQQMITIAMVVLGTMLTRFLPFMIFPSGKPTPKYVQYLGKVLPSAVIGLLVIYCLKDVSLLSGSHGIPELVGAAAV
VLLHLWKKNMLLSIAGGTVVYMVLVQLVF

Specific function: Involved in branched-chain amino acid transport

COG id: COG1687

COG function: function code E; Predicted branched-chain amino acid permeases (azaleucine resistance)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AzlD/HI_1737/HP1330 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): AZLD_BACSU (O07923)

Other databases:

- EMBL:   Y11043
- EMBL:   U93876
- EMBL:   AL009126
- PIR:   H69592
- RefSeq:   NP_390547.1
- EnsemblBacteria:   EBBACT00000004060
- GeneID:   937624
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU26700
- NMPDR:   fig|224308.1.peg.2672
- GenoList:   BSU26700
- GeneTree:   EBGT00050000006146
- HOGENOM:   HBG431865
- OMA:   LYMVLVQ
- ProtClustDB:   CLSK2460943
- BioCyc:   BSUB:BSU26700-MONOMER
- InterPro:   IPR008407
- PIRSF:   PIRSF003203

Pfam domain/function: PF05437 AzlD

EC number: NA

Molecular weight: Translated: 11970; Mature: 11839

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xd7b12fc)-; HASH(0x113984d8)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
8.2 %Met     (Translated Protein)
9.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
7.3 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMTMTQQMITIAMVVLGTMLTRFLPFMIFPSGKPTPKYVQYLGKVLPSAVIGLLVIYCL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KDVSLLSGSHGIPELVGAAAVVLLHLWKKNMLLSIAGGTVVYMVLVQLVF
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
>Mature Secondary Structure 
TMTMTQQMITIAMVVLGTMLTRFLPFMIFPSGKPTPKYVQYLGKVLPSAVIGLLVIYCL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KDVSLLSGSHGIPELVGAAAVVLLHLWKKNMLLSIAGGTVVYMVLVQLVF
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9287000; 9308178; 9384377